Procambarus clarkii (red swamp crayfish): 123751569
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Entry
123751569 CDS
T07930
Name
(RefSeq) LOW QUALITY PROTEIN: transcription elongation factor SPT6-like
KO
K11292
transcription elongation factor SPT6
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcla03021
]
123751569
03036 Chromosome and associated proteins [BR:
pcla03036
]
123751569
Transcription machinery [BR:
pcla03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
123751569
Chromosome and associated proteins [BR:
pcla03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
123751569
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
SPT6_acidic
HHH_9
S1
HHH_3
Tex_YqgF
SH2
Spt6_S1
Motif
Other DBs
NCBI-GeneID:
123751569
NCBI-ProteinID:
XP_069160355
LinkDB
All DBs
Position
52:8929823..8939011
Genome browser
AA seq
1306 aa
AA seq
DB search
MSQFIYSEAEESEEEQEEYEENERKKLKKLKTVIDDSSEEDDDDEEEKIREENKDFINDD
DEEDDEGGSGSDSEKYSKRKRRKDDEDKTNYLDDDDIDLIEENTGMKLDRKRKYKRLKRI
VDEESDVEEEDVQGQIRREIFEGSGVSKSLEFMLICSTPERVLEVAVRMVGWQLACEPLI
RRTVREVYLKRARISSRPTPQAVNIIDEHHSLYELKYLEDKPVIDLQGDQFLHLKCGVED
KLLTVSFSDTIEGSTTKTYLDEMKQLYCRDEFSQVVQDWNDLRGRAIEFAYKRIIEDLKR
ELSQRLLQESNDHVTEKCCSKLDKNWIKIAPYDPGDFSGDDEDWDTEKGFRVFSIAFVPD
LSQAAFGCCIDIDGDCCEYIRLPHLLKRRNAYNERDALTKKSDIRRMQDFITRCKPHVVS
ICGQSREALMVKEDLIQILKDLEKQERFPKINTKIIDNDLAHIYAMSKKGEADFLDYPPL
LRQAISVGRRVQDPLIEFSQLCNADEELLNIKFHSLQDQLNSKELLDALYTEFVNCTNEA
GVNLNRAVAHPYTQNLVQFVCGLGPRKANLLIRNMKQNNHRLENRNQLVVDFHMGPKIFI
NCAGFIKIDTNALGDSDNYIDVLDSTRIHPEAYDWARKMVFDALDYEDENGEPAEALKEI
LETPEKLSELDLKAFANELQNQGFGKKNTTLYDFKRELKHRYRDFRSTYRSPTPEEVFSI
LTKESPETFYVGKLVQATVTNFIHRKLRRDQVDNAYPVRTEGTGLWQCPFCLKNYFPELS
EVWNHFDAGDCPGPVIGIKVQLDNGISGFISIKNLSDKTVINPAERVRRDCLVLCRIMKI
YPDKFSVDLTSRSSDLQDRNNKWKAPKDTYYDHEAEEKDLNLDRKKMDQKASRYQKRVIV
HPSFRNIDYNEAEKVMQQLEQGEVIIRPSSKGINHLTATWKVTTGICQHIDVLEQAKQYD
FSLGQKLWIGNEEFDDLDEIITRHILPMASNVRQILEHKYYKESIMGNKEKAAELLKEEK
RKNPKSIPYIFSPRKDLPGKFLMSYLPRAKVIHEFVTVNPEGFKFRQKMQFLNLAGLLNW
FKQNFHRTLSGATPRMMSTGSSYMGNSTPYLMGVDAFTIQKVAQNLNPQMLHNLSQAATN
TPCSVNTSGGFSHGFSKYANTPYTPSDQTPYATPGPSTIPRYNGSQTLVPSNPTPSHQYE
AAYSQHMMTKVTGHLPQPSRCGSPVSSKQKKKGLKMAADALVEVNGATNGHNRRRMTPQC
NAGNQSTPCNTNQYDDHTPRHTPQYDDHTSRNTPRYNNQTPRLFHG
NT seq
3921 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagttcatttactcagaagcagaggaaagtgaagaagagcaagaagaatatgaa
gaaaacgaaaggaaaaaattgaaaaaactaaaaacagttatagatgactcttctgaagag
gatgatgacgatgaagaagagaaaattcgtgaagaaaataaagacttcattaacgacgac
gatgaagaggatgatgaaggaggttcggggtcagacagtgaaaagtatagcaaacgaaaa
cggcggaaggacgatgaagataaaacaaactacctcgatgatgatgatattgatcttatt
gaggagaacactggtatgaaacttgacagaaagagaaagtataagcgtttgaagaggatt
gtggatgaagaatctgacgtagaagaggaagatgtgcagggtcagattcgaagagagatc
ttcgagggttcaggcgtaagtaaatctctggagtttatgttaatatgcagcaccccagag
cgagtccttgaagtagctgttaggatggttggttggcagctggcttgtgaacccttaata
agacgcacagttagagaagtataccttaaacgtgccagaatcagtagcaggcccactcct
caggctgtgaacatcattgatgaacatcattcactttatgaacttaaatatttagaggac
aaaccagtcatagatctacagggtgaccagttccttcatctcaaatgtggtgttgaagac
aaactgttgaccgttagcttttccgataccattgaaggaagtacaactaagacttacctg
gatgaaatgaagcagttgtactgccgagatgagttttcccaggttgtccaagactggaat
gatctgagaggccgggcaattgaatttgcctacaaacggattattgaagatcttaaaagg
gaattgtctcaacgtttgctccaggaatcgaatgatcacgtgacggaaaagtgttgcagt
aaactcgataaaaactggataaaaattgcaccctatgaccccggagatttttctggtgac
gacgaagactgggatactgaaaaaggcttcagagtattttctattgcatttgttccagac
ctttcccaggcagcatttggttgttgcattgacattgacggtgattgttgtgaatatatt
cgtctcccacatttactcaaacggcgcaatgcttacaatgaaagagacgctttgactaaa
aaaagtgatattaggcgcatgcaggattttattactcgctgtaaaccacatgttgtttcc
atatgtggacagtctcgagaagctctcatggttaaggaagacctgattcaaattctcaaa
gatctagaaaaacaagaaaggtttcctaaaataaatacaaaaatcattgacaatgaccta
gctcacatatatgcaatgtccaagaaaggagaagcagatttccttgattaccctccacta
ttacggcaggctatatcagttggtcgacgtgttcaggatccattgattgaattctcgcag
ctatgtaatgctgatgaagaattacttaacattaagttccacagtctacaggaccaatta
aactctaaggaactactcgatgctctgtacactgaattcgtcaactgcactaatgaagct
ggggtcaacctaaatcgtgccgtagcacatccatatacacagaacttggtccagtttgtt
tgtggtttaggaccacgaaaggccaaccttcttattaggaatatgaagcagaataatcat
cgtctagaaaacaggaaccagttagttgtggacttccacatgggtccaaagatattcatt
aactgtgcaggatttattaaaatagacaccaatgctttgggtgacagtgataattatata
gacgttctagattctaccagaattcatccagaagcttatgactgggctcgaaaaatggtt
tttgatgcactagattatgaagatgaaaatggagaacctgcagaagccttgaaggaaatc
ttagaaactccagagaaacttagtgagcttgatcttaaagcttttgctaatgaactacag
aaccagggctttggcaagaagaacacaactttgtatgactttaaacgtgagctgaaacat
agatacagagattttaggtcaacctacaggtctccgacgccagaagaagttttcagtatc
ttgactaaggagtcgccggagactttttatgtgggtaagcttgttcaggctaccgtcaca
aattttattcatcgcaaactccgtcgagatcaagtggataatgcctatcctgtcagaact
gaaggtacaggtctttggcagtgtcccttctgtctaaaaaattattttcctgaactaagt
gaagtgtggaatcactttgatgccggtgattgcccaggtccagtcataggaattaaagtt
caattagataacggaatatcaggtttcatcagtataaaaaacttgtcggataaaacggtg
ataaatccagcagaaagagtgagacgagattgtttagttctttgtcgtatcatgaaaatt
tatcctgataaattttcagttgatctcacgtcacgatcatcagacctgcaggaccgaaat
aacaagtggaaggctccaaaagacacttattatgaccatgaggctgaagaaaaagattta
aatttggacaggaaaaagatggaccaaaaagcaagtcggtatcaaaagcgagtgattgtt
catccctccttcagaaacattgactataatgaagctgaaaaggttatgcagcaattggag
caaggagaggtgatcatacgaccatcaagtaaaggcattaatcatctcactgctacctgg
aaagttacaacaggaatctgtcagcatatcgatgtgctggaacaagctaagcaatatgac
ttttctcttggtcagaaactatggattggaaatgaagaatttgatgatttggatgaaatt
attaccagacacattttacctatggccagtaacgtaagacaaatacttgaacacaaatat
tacaaggagtctatcatgggcaataaggagaaagcagcagagttactgaaagaggagaaa
aggaaaaatccgaagtcgatcccgtatatcttttcgcctaggaaggatttgccaggaaag
tttctcatgtcatatttaccaagagcgaaagtgatccatgaatttgtaactgtcaatcct
gaaggtttcaagtttaggcagaaaatgcaattcctaaatcttgccggactacttaattgg
tttaagcagaatttccatagaacattatcaggtgcaacaccaagaatgatgtccacaggc
tcgtcatacatgggcaactcaacaccatatcttatgggtgttgatgccttcacaattcag
aaagtggctcagaacctaaatccacaaatgctgcataacctctcccaggcagccactaat
acaccttgtagtgtcaacacttctggaggattctctcatggtttctcaaaatacgctaat
actccttacactccttcagatcagacaccgtatgccaccccagggccatccaccatacct
cgctataatggatcacagacacttgtgccatcaaacccaactccctcacatcaatatgag
gcagcatattctcagcatatgatgaccaaagtaactggacacttacctcagccatctcgc
tgtggatccccagttagcagcaagcaaaaaaaaaaaggattgaaaatggcggcagatgct
ttggtggaagttaacggtgcgactaatggacataatagacgaaggatgacgccacaatgc
aatgctggaaaccagtcaacaccttgcaatactaatcaatatgatgaccacacacctcgc
catactcctcaatatgatgaccacacatctcgcaatactccacgatataataaccaaaca
cctcgccttttccatggttaa
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