Procambarus clarkii (red swamp crayfish): 123751721
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Entry
123751721 CDS
T07930
Name
(RefSeq) protein CASC3-like isoform X1
KO
K14323
protein CASC3
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla03013
Nucleocytoplasmic transport
pcla03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123751721
03015 mRNA surveillance pathway
123751721
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcla03019
]
123751721
Messenger RNA biogenesis [BR:
pcla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
123751721
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Phlebovirus_G2
Motif
Other DBs
NCBI-GeneID:
123751721
NCBI-ProteinID:
XP_069186761
LinkDB
All DBs
Position
24:complement(15726563..15751209)
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AA seq
852 aa
AA seq
DB search
MADRRRRRKLGTDEDSDESEDEQTGPRKPLTGSDGGESEYESADEEELGEEEEEEEDELI
IMPDGLVLGEDNKPLDDDEDRKNPQYIPKKGTFYEHDDRTAAEDDVEKPVEEPVVKKEVG
KKKVWKEDDKWNHDKFNEFDQSPKSREELIAIYGYDIRNEEGPPRARRRRRYGRGPNKYT
RNWEDLDAYSKPVRGSIRGGPGRGGPRSLHGSRKTLDNDEEFPVLNSPQYKKHEGDKYND
DLNKFESPVTRSEVPGAIVDNLHTGDNENYKPEQTAPLASPQQQSPPQYHQHQQQQQQQQ
QQQQQLHKISGFSPQPQDVRADGYGGRGRGYRGRGRGSGRGYNREREQHRYNEDRGGHNY
QDNRPSGRGNRGGHQQRLPQPHTPHTPRDIEEITAELKNISVSSQNREEPFRNKNRGGGG
NVDNRRNTMPPRLQESAAAAANMQGRGNRGGNASPGGDSSSSRPKRYSSQRQRSIPEQQV
PPFPPQHGYMDPSVDAGYQGGVNDGGIVTSAGHTVTAPHTQHPLAGGAPPTFVPPAFTTS
PPTFPPEPFLGRPPAPRMFPPVTQSPHLFGPPVAPPVPVPPVGGPPPVAGPLGAPPVGAP
PVPGPPVTGPPFLPPENMINFGAHPGPLPGAAPHPPQFPPFQGYTPGPVSQPGEIYSNGV
TYYNTESQQHLPRSIPPLQKRPKAAIPIVPPPERENKKDGMSLTQDETSAPIVLESRVQD
HEEPTSKEQSTSNGHTVLQDDPKEEYVTPLDSSSNDGVCQSQQPSQPETLELECKEVLQK
DIASCDTHSQLDTNIETALDVVSVKVESSENNIRSSKESLPVSVESLPTEQNNEAVTSGH
ILETPDTAVAAS
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atggcggacagaaggcgacggagaaagcttggcacagatgaggattctgacgagtccgag
gatgagcagacaggaccacggaagccccttactggaagtgatggaggtgagagtgagtat
gaaagtgctgatgaggaagagcttggggaagaggaggaggaggaagaggatgagctcatt
ataatgccagatggtcttgtattaggagaggacaacaagccattagatgacgatgaggat
cggaaaaaccctcagtatatccccaagaaaggaactttttatgagcatgatgaccggacc
gctgccgaagacgatgtagagaaaccggttgaagaaccagtcgttaaaaaggaagttggt
aagaagaaagtttggaaagaggatgataagtggaaccatgacaaatttaatgagtttgac
caatctcccaagtcccgggaagaattaattgctatatatggttatgatatacgtaatgaa
gaaggtcctccaagagctcgtcgtagaaggcgttatggtcgtggaccaaacaaatataca
cgcaattgggaggatttggatgcctactccaagcctgttcgtggttccatacgcggaggt
cctggaagaggtgggcccaggtctttgcatggcagccgaaaaactctagacaatgatgaa
gaattcccggtattgaattctccacaatacaaaaaacacgaaggcgataaatataatgat
gacctcaacaagtttgaatctcctgtgacaagatcagaagtgccaggagcaattgttgac
aatttgcatacaggtgataatgaaaattataaaccagaacaaacggcaccattagcctca
ccacagcagcagtcaccaccgcagtatcatcagcatcaacagcagcagcagcaacagcag
caacaacagcagcagctacacaagatctcaggttttagtccacaaccccaagatgtacgt
gctgatggctatggtggacgtggcagaggttacagaggtcgtggcagaggttctggtaga
ggctataatcgagaacgtgaacaacatagatataatgaggacagagggggccacaattac
caagacaatcgtcccagtggccgtggtaatagaggcggacaccagcagcgtttaccccaa
ccacatactccccatacacccagagatatagaggaaataacagcagagttaaagaacatc
agtgtcagttcacaaaatagagaagagccgttcaggaacaaaaatcgtggtggaggtgga
aatgtggataacagacgcaacacaatgcctccacgactgcaggaatcagccgctgctgca
gctaacatgcaaggtcggggaaacagaggtggtaatgcatctcctggcggagatagctca
tcttctagaccaaaaagatactcatctcaaagacaacgctccattcctgagcagcaagtt
ccacccttcccaccgcaacatggttatatggatccatctgtagatgcaggctaccaggga
ggagtaaatgatggaggcattgtgacatcagcaggtcacacagtgacagctcctcatacc
cagcatccattggctggtggtgctcctccaacctttgttcctccagcctttacaacttca
cctccaactttcccaccagaacctttcttaggacggcctcctgcacctcggatgttcccg
ccagtcacacagtcaccacacctctttggtcctccagtggcgccgcctgtgcctgttcca
cctgtgggtggtccacctccagtggcaggtcctctaggtgctcctccggtgggtgcaccc
ccagtccctggtcctccagttactggcccaccattcttaccccctgagaacatgattaat
tttggagctcatcccggtcctctcccaggggctgctcctcacccacctcagttcccgcca
ttccagggttacactcctggtcctgtgtcacagcctggagagatttacagcaatggagtg
acatattacaacactgagagtcagcagcatctaccaagaagtataccaccattgcaaaaa
aggccgaaggcagcaattccgatagtgccaccccctgaaagagagaataagaaggacgga
atgtctcttacccaagatgaaacttcagcaccaattgtcctggaaagtagggtgcaagat
catgaagaacccactagtaaagaacagtccactagtaatggtcacactgtgcttcaggat
gatcccaaggaagaatatgtcacgcctctagattcttctagcaatgatggtgtgtgtcaa
tcccagcaaccatcacagccagaaacattagagctagaatgcaaggaagttttgcagaag
gatattgcatcatgtgacactcattcacagctggacactaatatagaaaccgccttagat
gtagtttctgtgaaagtagaatcatctgaaaacaatataaggtcatccaaggaatcctta
ccagtgtcagtagagtctttacctactgagcaaaataatgaagcggtaacatctggtcac
atattggaaacacctgacacagcagtagcagcttcataa
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