Procambarus clarkii (red swamp crayfish): 123752129
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Entry
123752129 CDS
T07930
Name
(RefSeq) LOW QUALITY PROTEIN: rac guanine nucleotide exchange factor JJ
KO
K14323
protein CASC3
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla03013
Nucleocytoplasmic transport
pcla03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123752129
03015 mRNA surveillance pathway
123752129
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcla03019
]
123752129
Messenger RNA biogenesis [BR:
pcla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
123752129
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
123752129
NCBI-ProteinID:
XP_069177301
LinkDB
All DBs
Position
1:24894532..24907689
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AA seq
512 aa
AA seq
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MADRRRRRKLDTGEDSDESEDEQTGPRKPLTGSDGGECETANEEELGEEEEEEEDELIIM
PDGLVLGEDNKPLDDDEDRKNPQYIPKKGTFYEHDDRTAAEDDVEKPVEEPVVKKEVGKK
KVWKEDDKWNHDKFNEFDQSPKSREEIMAIYGYDIRNEGPPKAHCRRRYGRGPNKYTRNW
KDLDAYSKPVRGSIRGGPGRGGPRSLHGSRKTLDNDEEFPVLNSPQYKKHEGDKYNDLNK
FESPVTRSEVPGAIVDNLHTGDNENYKQQQLPPQYHQQQQQQQQQQQQQQQQQLHKISGF
SPQPQDVCADGYGGRGRGYRGSGRGYNRGRGYNREREQHRYNEDSWGQYYQDNCPSGRGN
YRGGHQQRLPQPHTPHTPRDIEEITAMLKNISISSQNRKEPFRNKNRGGGGNVDNRRNTM
PPRLQESAAAAANMQGRGNRGGNASPDGDSSSSRPKRYSSQRQRSIPGQQVXPFPPQHGY
MDPSVDAGLQESMVGAECMGMQSIAASRVQWD
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggcggacagaaggcgacggagaaaacttgacacaggtgaagattctgacgagtccgag
gatgagcagacaggaccacggaagccccttactggaagtgatggaggtgagtgtgaaact
gctaatgaggaagagcttggggaagaggaggaggaggaagaggatgagctcattataatg
ccagatggtcttgtattaggggaggacaacaagccattagatgacgatgaggatcggaaa
aaccctcagtatatccccaagaaaggaactttttatgagcatgatgaccggaccgctgcc
gaagacgatgtagagaaaccggttgaagaaccagtcgttaaaaaggaagttggtaagaag
aaagtttggaaagaggatgataagtggaaccatgacaaatttaatgagtttgaccaatct
cccaagtcccgggaagagataatggctatatatggttatgatatacgtaatgaaggtcct
ccaaaagctcattgtagaaggcgttatggtcgtggaccaaacaaatatacacgcaattgg
aaggatttggatgcctactccaagcctgttcgtggttccatacgcggaggtcctggaaga
ggtgggcccaggtctttgcatggcagccgaaaaactctagacaacgatgaagaattcccg
gtattgaattctccacaatacaaaaaacacgaaggcgataaatataatgacctcaacaag
tttgaatctcctgtgacaagatcagaagtgccaggagcaattgttgacaatttgcataca
ggtgataatgaaaattataaacagcagcagttaccaccgcagtatcatcagcagcagcag
cagcagcaacaacagcagcagcaacaacaacagcagcagctacacaagatctcaggtttt
agtccacaaccccaagatgtatgtgctgatggctatggtggacgtggcagaggttacaga
ggttctggtagaggttacaatcgtggcagaggctataatcgagaacgtgaacaacataga
tataatgaggacagttggggccagtattaccaagacaattgtcccagtggccgtggtaat
tatagaggcggacaccagcagcgtttaccccaaccacatactccccatacacccagagat
atagaagaaataacagcaatgttaaagaacatcagtatcagttcacaaaatagaaaagag
ccgttcaggaacaaaaatcgtggtggaggtggaaatgtggataacagacgcaacacaatg
cctccacgactgcaggaatcggccgctgctgcagccaacatgcaaggtcggggaaacaga
ggtggtaatgcctctcctgacggagatagctcatcttctagaccaaaaagatactcgtct
caaagacaacgctccattcctgggcagcaagttncacccttcccaccgcaacatggttat
atggatccatcggtagatgcaggactccaggagtccatggttggtgcagagtgcatgggc
atgcagtctattgctgcttcaagagtccagtgggattag
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