Procambarus clarkii (red swamp crayfish): 123752814
Help
Entry
123752814 CDS
T07930
Name
(RefSeq) U3 small nucleolar RNA-associated protein 15 homolog
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
123752814
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcla03009
]
123752814
Ribosome biogenesis [BR:
pcla03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
123752814
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_IFT122_1st
UTP15_C
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_THOC3
WD40
WD40_Prp19
WDR55
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
EIF3I
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
PAC11
ANAPC4_WD40
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_WDR41
Beta-prop_ACSF4
NBCH_WD40
WD40_RFWD3
Beta-prop_NOL10_N
DSE1_N
Beta-prop_SPT8
Beta-prop_Aladin
Beta-prop_VPS8
Beta-prop_SCAP
CFAP251_N
Beta-prop_NWD2_C
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_Nup120_160
WDR54
Beta-prop_Vps41
Beta-prop_DCAF12
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
123752814
NCBI-ProteinID:
XP_045590796
LinkDB
All DBs
Position
17:48172276..48198647
Genome browser
AA seq
542 aa
AA seq
DB search
MAAFKKTLTRAYSKSTAVTTPDTSYWKKLEFPVTVKEFTAINYVDVSPVDPHYIAVTSGP
KIDVYHKEATQVWRTITRFQRIAYGGKFKHDGQLLLAGSEEGQVKLFNYKQKQLLRIFKG
HHGPTHRVDFIQSSPQIVTFSDDKTAILWDMSDESQICTLTGHTDFVRAGIASPASENII
LSGSYDHTVKLWDTRTASCVLTVDHGAPVESLVCFPSGGVFVSAGGCEVKVWDAIAGQLL
AKLSQHHKTVTCLAFASDKKRLLSGSLDRHVKIYDVETYSVVHTLDYPAPVLSMAVAPGD
STLAVGMISAGCGLMSFQHRRDAETSAPVLSKRKASNIRNVASEDFVIMADDQVVTHTRR
EVMAKYDRMLCKFEYSRALDIVMSSYIAHKRPSISVGVLQELIRRGGIRTAVAGREVKTL
LPLLNFLIKYIRHPGYKQVLIDVVNVVIDVYGDTLDENPALVRQFTRLKDEVAAEVRLSR
EHVSLMGAIQIFLTASNPERAPTTTSIQQLTATSSVCNSDVHKALHPSSSAKSAAAVVVD
VS
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggcagccttcaagaagacactcacacgtgcctacagcaagtccaccgcggtcaccaca
cctgacacaagctactggaagaagctagagttcccagtcaccgtaaaggagtttactgct
attaattatgttgatgtgagcccagtagaccctcactatattgctgttacatctggtcca
aagattgatgtttaccacaaggaggcaacacaagtgtggcgaactattacaagatttcag
cggatagcctacggtggaaagtttaagcacgatggccagcttctcttggctggttcagaa
gagggccaagttaaactattcaattataaacaaaaacagcttcttagaatatttaaagga
catcatggtcccactcaccgtgttgacttcatccagagttcgccacagattgttaccttc
tcagatgacaagaccgccattctatgggatatgagtgatgagagccaaatttgcacttta
acaggacatacggattttgtgcgtgctggaattgcaagtccagcatcggaaaacataatt
ctcagtggctcatatgaccatacagtaaagctgtgggacacgcgtacagcaagctgcgtc
ctcactgtcgaccatggggctccagttgagagccttgtatgttttccatcaggcggagtt
tttgtttcggcaggtggttgtgaggttaaagtatgggatgccattgcagggcaattatta
gctaaactatcgcagcatcacaagactgtcacctgccttgcttttgccagtgataagaag
agacttttgtctggctctcttgaccgtcatgtcaagatctatgatgttgaaacttattct
gttgttcacacacttgactaccctgcaccagttctcagcatggcagttgctcctggagat
tctacactagctgttggaatgatttctgcagggtgtgggctaatgtctttccagcatcgt
cgggatgcagaaacaagtgctcctgtgctatccaagcgaaaagcttcaaatattagaaat
gttgcatctgaagatttcgtaataatggctgatgatcaggttgtaacacacacaaggcga
gaagtaatggccaaatatgatagaatgttgtgcaagtttgaatacagtcgtgcattggac
atagttatgtcatcatacattgctcacaaaagaccgagcatatctgtcggagtgttgcaa
gaattgataagacggggaggaatcaggactgctgtagctggtagagaagtcaagacattg
ttaccgctactcaacttcttgataaagtacattcgtcaccctggatataaacaagtcctc
atagatgtggtcaatgtcgttattgatgtgtatggggatacactggatgagaatccagct
ctagtcaggcagttcacacggttgaaggatgaggttgctgcggaagtgcgtctaagtcgt
gaacacgtttcactgatgggtgctattcaaatcttcctcacggcatcaaatccagaaaga
gctccaaccacaaccagtattcaacagttaacagcaacatcatctgtgtgtaatagtgat
gtgcataaagctctacacccatcttcgtcagctaaatctgctgcagcagttgttgtagat
gttagctga
DBGET
integrated database retrieval system
