Procambarus clarkii (red swamp crayfish): 123753013
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Entry
123753013 CDS
T07930
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA-splicing factor 38-like
KO
K12849
pre-mRNA-splicing factor 38A
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123753013
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcla03041
]
123753013
Spliceosome [BR:
pcla03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
123753013
Complex C
U4/U6.U5 tri-SnRNP related factors
123753013
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Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
123753013
NCBI-ProteinID:
XP_069179582
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Position
12:48741374..48742026
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AA seq
217 aa
AA seq
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MANRTIREARATHGTNPQYLVEKIIRTRIYDSRYWKEECFALSAELLVDKAIALRCIGGV
HGANSIPTPFLCLVLKMLQIQPEXIIIXFITQEDFKYARALGAFYLRLVCGSLNCYKYLE
PLLNDFRKLRVIDPSGQFQFTHMDEYIDCLLRDECSCDIILPRIQKRLFHEANNKLKGRV
SVLNDDLDNNERESDEEDIFPPPRPRNDPVEVYNIYK
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atggccaaccgcacgatcagggaagcccgggccactcacggcacaaacccccagtattta
gttgagaaaattataagaactaggatatacgactctagatactggaaagaagaatgcttt
gccctctcggcggaattactagtcgacaaagcaatagccctcaggtgtattggtggtgtt
cacggagccaacagcatacccacgccattcctatgtctcgtgctaaagatgctccagatc
caacctgagnacataattatataattcatcacacaagaggattttaagtatgctcgtgct
ttgggggcattttacttgagacttgtatgtggatcactgaattgttacaagtacctggaa
cctctccttaatgactttaggaaactacgcgttattgacccttccggccagttccagttt
actcacatggatgaatatattgattgtttattaagagatgaatgttcatgtgatataatt
ttaccgaggatccaaaagagactgtttcatgaagccaacaacaagcttaaaggtcgagta
tccgtattaaatgatgatttggacaacaacgagagggaaagtgatgaggaggacatcttt
cctccaccaagaccaagaaatgatccagtagaggtttataatatatataaatga
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