Procambarus clarkii (red swamp crayfish): 123753365
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Entry
123753365 CDS
T07930
Name
(RefSeq) LOW QUALITY PROTEIN: transcription elongation factor SPT6-like
KO
K11292
transcription elongation factor SPT6
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcla03021
]
123753365
03036 Chromosome and associated proteins [BR:
pcla03036
]
123753365
Transcription machinery [BR:
pcla03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
123753365
Chromosome and associated proteins [BR:
pcla03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
123753365
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
SPT6_acidic
HTH_44
HHH_9
S1
Tex_YqgF
HHH_3
Tex_N
Spt6_S1
Motif
Other DBs
NCBI-GeneID:
123753365
NCBI-ProteinID:
XP_069160268
LinkDB
All DBs
Position
52:complement(8716176..8736042)
Genome browser
AA seq
1788 aa
AA seq
DB search
MSQFIYSEAEESEEEQEEYEENERKKLKKLKTVIDDSSEEDDDDDEEKIREENKDFINDD
DEEDDEGGSGPDSEKYGKRKRRKDDEDKTNYLDDDDIDLIEENTGMKLDRKRKYKRLKRI
VDEESDVEEEDVQGQIRREIFEGSDDEEEDGASALHPPQHPEMYASEEEESDEENFIVDD
KTPNVKQERMAMLEPGGMKVAREILGGDYHFEEFEQHEEWEERENDDDDHENDEKGDEGR
EHPRGRKDRGNQVKKTIFEVFEPSELERGHLTDQDHQIRKLDIPERFQLRRIPVTRTRGD
GDDRSADKELTQEAKWIYHHAFFRPFISNQEGREKARHGSHKDTNTIQKIYNALDLMRNQ
TFEIPFIAFYRKEEVCPELNIRDLWKIYRWDEKWCQLKYRKENLRSLFQSMREYQGDHIT
KDPDGSHIENMRILQEEDIVRIEEIETSEQFNDYYKFFLLHYGKDQLSMRDHMNTKHRKQ
RTTPRVTRGFKEHDHGERDQNGAGIEDGKIQRKVDEYEDTEDADEYEKSGNNKNKKGSLR
ANEDVEKELEIEIEEQMEEENHESEEDSESLRRIVRKHEYELLRKAGIESLTNKFGLTAE
QFGENLRDKYQRFDVQQWPEDPTREAKQLISKICSTPERVLEVAVRMVGWQLACEPLIRR
TVREVYFKRARISSRPTPQAVNIIDEHHSLYELKYLKDKPVIDLQGDQFLRLKCGVEDKL
LTVSFSDTIEGSTTKTYLDEMKQLYCRDEFSQVVQDWNDLRGRAIEFAYKRIIKDLKREL
SQRLLQESNDHVMEXCCSKLNNWIKIAPFNPGDFSGEDEDWDTEKGFRVFSITFVPDLSQ
AAFGCCIDIDGDCCEYIRLPHLLKRRNAYNERDALAKKSDIRHMQDFIIRCKPHVISICG
QSREALMVKEDLIQILKDLEKQERFPKINTEIIDNDLAHIYAMSKKGEADFLDYPPLLRQ
AISVGRRVQDPLIEFSQLCNADEELLNIKFHSLQDQLNSKELLDALYTEFVNCTNEVGVD
LNRAVAHPYTQNLVQFVCGLGPRKANLLIRNMKQNNHRLENRNLLVVNFHMGPKIFINCA
GFIKIDTNALGDSDNYIDVLDSTRIHPEAYDWARKMVFDALDYEDENGEPAEALKEILET
PEKLSERDLKAFANELQNQGFGKKNTTLYDIKRELKHRYRDFRSTYRSPTPEEVFSILTK
ESPETFYVGKLVQATVTNFIHRKLRRDQVDNAYPVRTEGTGLWQCPICLKNYFPELSEVW
NHFDVGDCPGPVIGIKVRLDNGISGFISIKNLSDKTVINPAERVRRDCLVLCRIMKIYPD
KFSVDLTSRSSDLQDRNNKWKAPKDTYYDHEAEEKDLNLDRKKMDQKASRYQKRVIVHPS
FRNIDYNEAEKVMQQLEQGEVIIRPSSKGINHLTATWKVTTGICQHIDVLEQAKQYDFSL
GQKLWIGNEEFDDLDEIITRHILPMASNVRQILEHKYYKESIMGNKEKAAELLKEEKRKN
PKSIPYIFSPRKDLPGKFLMSYLPRAKVVHEFVTVNPEGFKFRQKMQFLNLAGLLNWFKQ
NFHRTLSGATPRLMSTGTSYMGNSTPYLMGVDAFTIQKVAQNLNPQMLHNLSQAATNTPC
SVNTSGGFSHGFSKYANTPYTPSDQTPFMTPYATPGPSTIPPYNGSQTLVPSNPTPSHQY
EAAYSQHMMTKVTGHLPQPSRCGSPVSSQAKNKKGLKMAADALVEVNGATNGHNRRRMTP
QCNAGNQSTPRNTNQYDDHTPRHTPQYDDHTSRNTPRYNNQTPRLFHG
NT seq
5367 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagttcatttactcagaagcagaggaaagtgaagaagagcaagaagaatatgaa
gaaaatgaaaggaaaaaattgaaaaaactaaaaacagttatagatgattcttctgaagag
gatgatgacgatgatgaagagaaaattcgtgaagaaaataaagacttcattaacgacgac
gatgaagaggatgatgaaggaggttcggggccagacagtgaaaagtatggcaaacgaaaa
cggcggaaggacgatgaagataaaacaaactacctcgatgatgatgatattgatcttatt
gaggagaacactggtatgaaacttgacagaaagagaaagtataagcgtttgaagaggatt
gtggatgaagaatctgacgtagaagaggaagatgtgcagggtcagattcgaagagagatc
ttcgagggttcagacgatgaggaggaggatggggcctccgctctccaccctccacagcac
cctgaaatgtacgcgtcagaggaggaagagtctgatgaagagaatttcattgttgatgac
aagacacccaatgtcaaacaggagaggatggctatgcttgaacctggtggaatgaaggtt
gcccgtgaaatattaggcggtgattatcattttgaggagtttgaacaacatgaagaatgg
gaggagcgtgaaaatgatgatgatgaccatgagaacgatgaaaaaggcgatgagggacga
gagcatccccgaggtcgcaaggatcgcgggaatcaagtcaagaagactatctttgaggta
tttgaacctagtgaattagagcgaggccatttgactgaccaagatcatcaaatccggaag
ctggatattcccgagagattccagctgaggcggatacctgtgactcgcacccgtggagat
ggtgacgatcgctcagcagataaagagctgactcaagaagccaagtggatttatcaccat
gcattcttcaggccatttatatccaatcaggaggggcgtgaaaaggcaaggcatggctcg
cacaaggatactaatactatccagaaaatatacaacgccctggacttgatgaggaaccaa
accttcgaaattccatttatagccttttataggaaggaagaggtctgccctgaattaaac
attcgtgatttatggaaaatctatcgttgggatgaaaagtggtgtcaactgaagtatcgc
aaggagaacttgcggtcactcttccagtcaatgagagaataccaaggtgatcacatcacg
aaggacccagatggttcacatatagaaaatatgcgtattcttcaggaggaggacattgta
agaattgaggagattgaaacttcagaacagttcaatgattattacaaatttttcctgctt
cactatggcaaagatcagctatcaatgcgtgaccacatgaataccaagcacaggaagcag
agaaccacaccaagagtcactaggggttttaaggagcatgatcatggtgaacgggaccaa
aatggtgctggtattgaggatgggaagatacagaggaaagtagatgaatatgaggataca
gaggatgcagatgaatatgagaagagtggtaataataaaaacaagaaaggttcattgaga
gctaatgaggatgtagaaaaagagttggagatagaaatagaagaacaaatggaggaagaa
aatcacgaatctgaggaagactctgagtctttgagaagaattgttcgaaaacacgagtat
gaacttctgcggaaggctggtattgagtcacttacaaataaatttggcctgactgctgag
cagtttggtgagaacctacgtgataagtatcagaggtttgatgttcaacagtggccagag
gaccccacgagggaagctaagcagctcatttccaaaatatgcagcaccccagagcgagtc
cttgaagtagctgttaggatggttggttggcagctggcttgtgaacccttaataagacgc
acagttagagaagtatactttaaacgtgccagaatcagtagcaggcccactcctcaggct
gtgaacatcattgatgaacatcattcactttatgaacttaaatatttaaaggacaaacca
gtcatagatctacagggtgaccagttccttcgtctcaaatgtggtgttgaagacaaactg
ttgaccgttagcttttccgataccattgaaggaagtacaactaagacttacctggatgaa
atgaagcagttgtactgccgagatgagttttcccaggttgtccaagactggaatgatctg
agaggccgggcaattgaatttgcctacaaacggattattaaagatcttaaaagggaattg
tctcaacgtttgctccaggaatcgaatgatcacgtgatggaanagtgttgcagtaaactc
aataactggataaaaattgcaccctttaaccccggagacttttctggtgaagacgaagac
tgggatactgaaaaaggcttcagagtattttctattacatttgttccagacctttcccag
gcagcatttggttgttgcattgacattgacggtgattgttgtgaatatattcgtctccca
catttactcaaacggcgcaatgcttacaatgaaagagacgctttggctaaaaaaagtgat
attaggcacatgcaggattttattattcgctgtaaaccacatgttatttccatatgtgga
cagtctcgagaagctctcatggttaaggaagacctgattcaaattctcaaagatctagaa
aaacaagaaaggtttcctaaaataaatacagaaatcattgacaatgacctagctcacata
tatgcaatgtccaagaaaggagaagcagatttccttgattaccctccactattacggcag
gctatatcagttggtcgacgtgttcaggatccattgattgaattctcgcagctatgtaat
gctgatgaagaattacttaacattaagttccacagtctacaggaccaattaaactctaag
gaactactcgatgctctgtacactgaattcgtcaactgcactaatgaagttggggtcgac
ctaaatcgtgccgtagcacatccatatacacagaacttggtccagtttgtttgtggttta
ggaccacgaaaggccaaccttcttattaggaatatgaagcagaataatcatcgtctagaa
aacaggaacctgttagttgtgaacttccacatgggtccaaagatattcattaactgtgca
ggatttattaaaatagacaccaatgctttgggtgacagtgataattatatagacgttcta
gattctaccagaattcatccagaagcttatgactgggctcgaaaaatggtttttgatgca
ctagattatgaagatgaaaatggagaacctgcagaagccttgaaggaaatcttagaaact
ccagagaaacttagtgagcgtgatcttaaagcttttgctaatgaactacagaaccagggc
tttggcaagaagaacacaactttgtatgacattaaacgtgagctgaaacatagatacaga
gattttaggtcaacctacaggtctccgacgccagaagaagttttcagtatcttgactaag
gagtcgccggagactttttatgtgggtaagcttgttcaggctaccgtcacaaattttatt
catcgcaaactccgtcgagatcaagtggataatgcctatcctgtcagaactgaaggtaca
ggtctttggcagtgtcccatctgtctaaaaaattattttcctgaactaagtgaagtgtgg
aatcactttgatgtcggtgattgcccaggtccagtcataggaattaaagttcgattagat
aacggaatatcaggtttcatcagtataaaaaacttgtcggataaaacggtgataaatcca
gcagaaagagtgagacgagattgtttagttctttgtcgtatcatgaaaatttatcctgat
aaattttcagttgatctcacgtcacgatcatcagacctgcaggaccgaaataacaagtgg
aaggctccaaaagacacttattatgaccatgaggctgaagaaaaagatttaaatttggac
aggaaaaagatggaccaaaaagcaagtcggtatcaaaagcgagtgattgttcatccctcc
ttcagaaacattgactataatgaagctgaaaaggttatgcagcaattggagcaaggagag
gtgatcatacgaccatcaagtaaaggcattaatcatctcactgctacctggaaagttaca
acaggaatctgtcagcatatcgatgtgctggaacaagctaagcaatatgacttttctctt
ggtcagaaactatggattggaaatgaagaatttgatgatttggatgaaattattaccaga
cacattttacctatggccagtaacgtaagacaaatacttgaacacaaatattacaaggag
tctatcatgggcaataaggagaaagcagcagagttactgaaagaggagaaaaggaaaaat
ccgaagtcgatcccctatatcttttcgcctaggaaggatttgccaggaaagtttctcatg
tcatatttaccaagagcgaaagtggtccatgaatttgtaactgtcaatcctgaaggtttc
aagtttaggcagaaaatgcaattcctaaatcttgccggactacttaattggtttaagcag
aatttccatagaacattatcaggtgcaacaccaagattgatgtccacaggcacgtcatac
atgggcaactcaacaccatatcttatgggtgttgatgccttcacaattcagaaagtggct
cagaacctaaatccacaaatgctgcataacctctcccaggcagccactaatacaccttgt
agtgtcaacacttctggaggattctctcatggtttctcaaaatacgctaatactccttac
acaccttcagatcagacaccattcatgacaccgtatgccaccccagggccatccaccata
cctccctataatggatcacagacacttgtgccatcaaacccaactccctcacatcaatat
gaggcagcatattctcagcatatgatgaccaaagtaactggacacttacctcagccatct
cgctgtggatccccagttagcagccaagcaaaaaataaaaaaggattgaaaatggcagca
gatgctttggtggaagttaacggtgcgactaatggacataatagacgaaggatgacgcca
caatgcaatgctggaaaccagtcaacacctcgcaatactaatcaatatgatgaccacaca
cctcgccatactcctcaatatgatgaccacacatctcgcaatactccacgatataataac
caaacacctcgccttttccatggttaa
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integrated database retrieval system
