Procambarus clarkii (red swamp crayfish): 123753933
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Entry
123753933 CDS
T07930
Symbol
pic
Name
(RefSeq) DNA damage-binding protein 1
KO
K10610
DNA damage-binding protein 1
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla03420
Nucleotide excision repair
pcla04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
123753933 (pic)
09124 Replication and repair
03420 Nucleotide excision repair
123753933 (pic)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcla04121
]
123753933 (pic)
03400 DNA repair and recombination proteins [BR:
pcla03400
]
123753933 (pic)
Ubiquitin system [BR:
pcla04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
123753933 (pic)
DNA repair and recombination proteins [BR:
pcla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
123753933 (pic)
TCR (transcription coupled repair) factors
Cul4-CSA complex
123753933 (pic)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_RSE1_1st
Motif
Other DBs
NCBI-GeneID:
123753933
NCBI-ProteinID:
XP_045591879
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All DBs
Position
6:complement(21199451..21251538)
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AA seq
1137 aa
AA seq
DB search
MATAAYNYVVTAHKPTAVTACATGHLTSPTDLNLVVARNNRVELHLVTPEGLRPLKELTI
YGKIACMHLFTPMNEAKDSLFILTTRYCAMILECVGDGDHLEILTRAHGNVSDKIGKPCE
TGMIAIVDPQARCIVLRLYEGLIKVIPLDKDNNELKAYNIRVDELQIQDIEFLYGCSNPT
IIVIYQDTHGRHIKTHEISLKEKEFSKMPWKQDNVETEASTIIAVPEPYGGAIIIGQETI
TYLTGTSHVTVAPALIKTSTIVCYGKVDANGSRYLLGDMSGRLFMLLLDKSDDRAEAVVK
VELLGETSIPECLTYLDNGVVFVGSRLGDSQLIKLNTEADSSGQYVTVMQTFNNLGPIVD
MVVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEQASIELDGIKGMWSLSVNSGKHH
NTIVLSFVGLTRVLTLSGEEVEETEITGFVADQQTFLSSNVKYEQLLQVTGTSCRLVTES
NGQLACEWRPPEGRNISVVAANSNQVVAAAGQHIYYLTIQQSNLKLEASTTVEHEVACLD
VSPLWEEEMASVVAVGLWTDISARVLALPSLEENAKEFLGGDIIPRSILMTTFEGHHYLL
CAMGDGQLFYFSYAPSTGYLSDKKKVVLGTQPTTLRRFRSLSSTNVFACSDRPTVIYSSN
HKLVFSKVNLREVTHMCPLNAEAYPSSLALATSEGITIGTIDEIQKLHIRTVALGETPRR
IAYQEETETFGVITMRVDVMDNNGLRSGGACASLGAHSTSAASTTSSLLKPPVQPPPEPG
QEVETHNLLVISQNTFEVLHCHSFHPGEYALSICSTRLKDDPTVYYVVGTALVNPEESES
KQGRIILFSFGEGKLQQVAEKEIKGACYSLCEFQGKLLASISSTVRLFEWTNERELRLEC
SHFNNVAALCLKTKGDFILVGDLMRSMTLLQYKTLEGSFEEIARDYDPNWMTAIEILDDE
LFLGAEHSHNLFVCHKDSAATSDEERQQMQEVGRFHLGDFVNVFRHGTLVMQGVPEASTV
TQGCVLYGTVHGALGLVTSLHLELYNQLLEMQKRLARIIKSVGKIDHDFYRSFSTERKTD
RCEGFIDGDLIESFLDLGPEKMKEVAQGLMINDGSGMKTEATPDDLIKTVEELTRIH
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atggccacagcagcttataattatgttgttaccgcccacaaacccaccgccgtcacagca
tgtgctacgggccacctgacatcacctacagacctcaaccttgtagttgctcgcaataac
agggtcgagcttcatctggtaacacctgaaggactcagacctctcaaggaactcactata
tatggcaagatagcttgcatgcacctcttcactccaatgaatgaagctaaagactcgctg
ttcattttgactacaagatactgtgctatgattttagagtgtgtgggtgatggagatcac
cttgaaattctcactcgtgcccatggaaatgtgtctgataaaattggtaagccatgcgag
acgggaatgatagccattgttgatcctcaagctcggtgcattgtcttgcggctctatgaa
ggtcttattaaagttattcctctcgacaaagacaacaacgaactaaaggcttataatatt
cgagttgatgagcttcagattcaagatatagaatttttatatggttgttctaatcccaca
ataattgttatttatcaagatactcatggaagacacatcaaaactcatgagatttcatta
aaagaaaaggaattctcaaagatgccttggaagcaagacaatgtggagacagaagcctcg
acaataattgccgttcccgagccatatggtggggccatcattattgggcaggaaacaatc
acatatttgacaggcacctcacatgttactgtggctccagcacttatcaagacaagtact
atcgtttgttatggcaaagtggatgccaatggatccagataccttcttggagacatgtcg
gggcgtctgtttatgctgctgctggacaaatcagatgaccgtgcagaagctgtcgtcaaa
gtggagctcttaggggaaacttcaattcctgagtgcctgacgtacctggacaatggtgtg
gtttttgttggatcccgccttggtgactctcagttaataaagctaaatactgaggcagac
tcatcaggccagtatgtgactgtcatgcagacattcaacaatctcggacctattgttgat
atggttgtagttgatttggaacgacaaggacaaggacagcttgtaacttgctcaggtgcc
tttaaggaaggatcgttgcggatcattcggaacgggatcggcatccacgagcaggcttct
attgagctggacggtatcaagggcatgtggtcactgagtgtgaattcaggaaagcatcac
aatactatcgtcctctcatttgttggcctcaccagggtgttgacattgagtggtgaggag
gtagaagagacagagattactggtttcgttgccgaccaacagacctttttatcctccaat
gttaaatatgagcagttacttcaggtgacgggaacgtcttgccgcttagttaccgaaagc
aatgggcagctggcgtgtgaatggagaccaccagaaggtcgcaacatctctgtagttgcc
gccaacagtaaccaggtggtggctgcggcgggccaacacatttattatctcaccatccag
cagtctaatttgaaacttgaagcatccactactgtggagcatgaagttgcctgccttgat
gtctcgcctctctgggaagaagaaatggcatctgttgtggctgttggcctctggactgac
atatctgcaagagttcttgcccttccttcactagaggaaaatgccaaagagtttcttggg
ggagatattattcctcgttctatactgatgacaacatttgagggccaccactacctctta
tgtgccatgggagatggccagctattttatttcagctatgctccatcaactggttacctc
tctgataaaaagaaggtggttcttggaacacagcccacaacattgcgaaggttccgttct
ctgtcttcgacgaatgtgttcgcttgttctgaccgacccacagttatctattcgtctaac
cataagctagtcttctccaaagtcaatttaagagaagtgacacacatgtgcccactgaat
gcagaggcttatcctagtagtcttgccttagccaccagtgagggcattaccattggtacc
attgatgaaatacaaaaattacacatccgcacagttgcattgggagaaacccctcgacgc
attgcttatcaggaggagacagagacatttggagtaataacaatgcgtgtggatgtgatg
gacaataacggattgcgtagtgggggtgcgtgtgcctccctgggtgcccactctacgtct
gctgcatcgacaacgtccagcttactcaagcccccagttcaacctccacctgaacctgga
caagaagttgagacacacaaccttcttgttatatcacaaaatacttttgaagttcttcac
tgtcacagtttccatcctggagagtatgcattaagcatatgctccacaaggctgaaggat
gacccaactgtgtattatgttgtgggcacagcactcgtcaaccctgaagagtccgagtcg
aaacagggacggattattctcttctcgtttggcgagggtaaactgcagcaggtggctgaa
aaagagataaaaggagcttgctattctctgtgcgagttccagggcaaattgttagcttca
atttcaagtacggtgaggctgtttgaatggaccaatgaaagagaactacgactagagtgt
tcccacttcaacaatgttgcagccctgtgtctgaagactaaaggggacttcatccttgtt
ggtgacttgatgcgctcaatgaccctcctccagtacaagacattggagggcagttttgaa
gaaattgcaagggattatgaccccaactggatgacagcaatcgagattttagatgatgag
ctgttcctgggagcagaacattctcataatctttttgtttgtcataaagatagtgcagca
acatctgacgaggagcgacaacagatgcaagaagttgggaggtttcacctaggtgatttt
gtgaacgtgtttcgtcacggaacactagtgatgcaaggggttcctgaggcatctactgtg
actcaggggtgtgtcctgtatggcacagttcatggtgcactgggacttgtgacaagcctg
catttggaactatacaatcagcttttagagatgcagaagcgacttgctcgcattattaaa
tcagttggaaagattgatcatgacttttacagaagcttcagcactgaacgcaagactgac
aggtgtgagggcttcattgatggtgacctgattgagagtttcttggaccttggcccagaa
aagatgaaggaagtagctcagggtttgatgattaatgacggttcaggaatgaaaactgaa
gccaccccagatgacctcattaaaactgtagaagaactgaccagaatccattga
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