Procambarus clarkii (red swamp crayfish): 123754289
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Entry
123754289 CDS
T07930
Symbol
Rrp5
Name
(RefSeq) protein RRP5 homolog
KO
K14792
rRNA biogenesis protein RRP5
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcla03009
]
123754289 (Rrp5)
Ribosome biogenesis [BR:
pcla03009
]
Eukaryotic type
90S particles
Other 90S particles
123754289 (Rrp5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1_RRP5
S1
OB_RRP5_4th
TPR_14
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
Suf
HAT_PRP39_C
HAT_Syf1_CNRKL1_C
TPR_19
NRDE-2
Sina_TRAF
Motif
Other DBs
NCBI-GeneID:
123754289
NCBI-ProteinID:
XP_045592491
LinkDB
All DBs
Position
18:25133546..25159467
Genome browser
AA seq
1517 aa
AA seq
DB search
MTLSEGKRKERDLFSVKAKVDPSKTNKKRKKQNKIGEAVKKRQKTDNFSTVDIQPLTYET
LVEGQVILGRVSQVHEYTLHISLPHKLRGTVTIARISNAYNILLTKVKENEDDCEETVHT
LQELFKPGQYVVTRVVSVENVNNKFKVNLSLAPQEVNSGISTSHLRVGYVLPCAVSSVED
NGYVMDMGIPNVRGAFLRNTATDGSGIVGVGSVVRCVITKIMRSEDESNMRFKLSAEAKA
VSNATLDITDTINLSLLLPGTAVVTSISKIEKEGLYLIAAGCDGVVHRLHLEQPLDRLKQ
YKMAQKVRARVLYIAPLTKVVHFTLQKETCNAIPETDPLHGIKIGDTIKNAEIYESNRSG
IYVKIGEQCRGFCSGNRLTDKEKPPEHVARDFPVESRQICRVIQYDYMDQLFIVSLRKSV
LEQQFVKYSEIQVGGVLKATIKGYNAHGAQVAVSKLVTGFVPFLHLTDTHMKNPEKKFPV
GETVKARVVKVNPERQYLLLTCKKYLVESKESIVTEYTKDAENMITEGCIVKVTSAGLLI
AMYNDVKGFAPKSCLSTEPIENVEKLFSEGQVVKCRILTVAPENKKMTLSLIIDGNNPFG
KKKGKQMKLVSQVQMREKVNCIVKEIKEDSIKVNLQPKGIEAEIPVNHLSDDTNKSRLIK
ELLHEGDEIHNAVVFKKDVTTITLTLKYSVFHWVCADGGSHSNSEFLINNSYPAAILEVR
TYGLMTSIPVGNHGRSVLIHATNLTDSSKWLDCTNLGISVGQSISVVHKGEDRNGRPILS
SSLKTNLKNVTQSSIQLLHSYLRDEDMIINRWSESCGTKGLLAKFKTGDKIKARVTAITP
LGLVVTVNQGKVIGILSQDHQDINTNTEVGQEILVCVLRINQEEECLELTARSDILKCLH
MRETNKIKVEMKAKCEVLLARKNFILVMLKTRCVGRVAYMPSLRHTNDFKGRHSLYTVGK
NYRVVIKYIDGPHILGVLNHHDKKEDLNILSERPSVIFNASTDALVEKVEHMEVESGNLE
EMALCKIQRIRTVSQCSTDSIESITSGSNSKDKDAVTVKIINKEKLKTLITDSAPQYDEE
TLNENQKKRRLEKRHLRLLEKKRKVEDGEEEINETIDIEEANGVTSPDTSCALEDPCNKE
NIQDESIAKKAKRKQLKKDKKASKKARKTQAKVDLTEDSCLALGTGFVWEVPDTAGDMGK
ECSESEDEVDVKGKKTKKLTKAEQQILARQEEKLLHELELARLEKDRLPESALDYEELLQ
RSPNSSALWIQFISFHLESVEIDKAKAVAHRALQVIDIREEEERLNIWTVLLRLEVSYGT
PESVAETYREALATNDQLKVHMAMAMVYAESNKLKEAEKVYFIMTKKFSQNRDVWIKAGI
FFFSNSMADEGRRYMDRALLSLDKSDHVELINRFGQLEFRFGEAERGRTIFESLLSNYPK
RIDIWSVYIDILAKKEDIEGARHVLERMTGLKLRLRKMRSIFKKFLDFEKEHGSPQSVEA
VRKRVEEFVTSALHQDV
NT seq
4554 nt
NT seq
+upstream
nt +downstream
nt
atgacactgtctgaaggaaaacgcaaagaacgagatcttttctcggtcaaggcaaaggtt
gacccaagcaaaaccaataaaaagaggaaaaagcagaataagattggtgaagctgtaaag
aaaagacagaaaactgataatttttctacagttgatatacaacctttaacttatgagaca
ttggtagaagggcaagttatcctgggtcgtgtgtctcaagttcacgagtatactttgcat
atcagtcttcctcataagctgagaggcactgtcaccattgctcgcatatctaatgcttac
aatatcctccttacaaaggtaaaagaaaatgaagatgactgtgaagagacagtccacaca
ttgcaggagctcttcaagccgggccaatatgtagttacccgagtagtatctgttgaaaat
gttaataacaaattcaaagtcaacctgtcactggcaccccaggaagtcaactctggcatc
tcaacatcacatctccgagttggctacgttttaccatgtgccgtgtccagtgttgaagac
aatggatatgttatggacatgggcattccgaatgttagaggagcttttttgaggaacaca
gcaactgatgggtcaggaattgttggtgtgggtagtgttgttcggtgcgtcataaccaag
ataatgagaagtgaagatgaaagcaatatgcggttcaaactgagtgctgaggccaaagct
gtcagtaatgccactcttgacattactgatacaataaacctgtcactcctgcttcctggc
actgcagttgtcacctctatatcaaagattgagaaggaaggcctgtaccttattgcagca
ggttgtgatggtgtagtacatcgtctgcatctggagcagcctttagatcgtctgaaacag
tataagatggcccagaaggtcagggcaagagtcctgtacattgcaccacttactaaggtg
gtgcacttcacactacaaaaggaaacatgcaatgcaatcccagaaactgatcctttacat
ggcattaaaattggggacacgatcaagaatgcagagatttatgaatcaaatcgaagtgga
atatatgtgaagattggggaacaatgtagaggattttgctcggggaatcgtttgactgat
aaagaaaagccaccagagcatgtggctcgagatttcccagttgaatccagacaaatatgt
cgtgttatccagtatgattatatggaccagctgttcattgtgtcgctgcgaaaatctgtc
ttggagcaacagtttgttaaatatagtgaaattcaagtaggcggagtcctgaaggctact
atcaaaggctataatgcacatggtgcacaggttgctgtgagcaaacttgtcactggcttc
gtcccgttcctacacctcacagacacgcacatgaagaacccagaaaaaaaatttccagtt
ggtgaaacggttaaagctcgagtagtcaaggttaatccagagaggcaatatttacttctc
acctgcaagaagtatttggtggaatctaaggaatccattgtgacagagtataccaaggat
gctgaaaatatgataacagaaggatgtattgtgaaagttacttctgccggcttgctaatt
gcaatgtataatgatgtgaaaggatttgctcccaagtcgtgtctcagcactgaacctatt
gaaaatgttgagaaactattttccgagggtcaagtggtgaagtgtaggattttaacggtt
gctccagaaaataaaaaaatgactttaagtttgattattgatggaaataatccctttggc
aaaaagaaagggaaacagatgaagttagttagtcaagtacagatgagagagaaagtaaac
tgcattgtaaaggagataaaagaggacagcatcaaagttaacttacaaccaaaaggaatt
gaagctgaaattcctgttaaccatctgtctgatgacaccaataagagcaggctgataaaa
gaacttttgcatgaaggagatgaaatccataatgctgttgtattcaagaaagatgttact
accattactttaactcttaagtattctgtttttcattgggtttgtgctgatggtggatct
cactcaaattctgaatttttaataaataatagttacccagctgctatactcgaagttcga
acttacgggttgatgacatctattcctgttggtaatcatggtcgtagcgttcttatacat
gcaacgaacttgacagactcgagcaagtggcttgactgtactaacctgggaatatcagtt
gggcagagtatatcagttgttcacaaaggtgaagacaggaatggtcgtccaatcttatcc
tcttccttgaaaactaatttaaagaatgttactcagtcaagcattcagttactccatagt
tatctcagagatgaggacatgattataaatagatggtcagaaagttgtggcacaaagggt
ctactggcaaagtttaaaactggagacaaaattaaagccagagtaaccgcaatcactcct
ctcggtcttgttgtaacagtgaaccaaggtaaagtaattggaattttgtcccaagatcat
caagatattaataccaatactgaagtgggccaggaaatactggtttgtgttcttcggatt
aatcaggaggaagaatgcttggagctgacagcaagatcagacattcttaagtgtcttcat
atgagggaaactaataagatcaaagttgaaatgaaagctaagtgtgaagttctacttgcc
agaaagaatttcatcctggttatgttgaagacccgttgtgtgggaagggttgcttacatg
ccctctctcagacatacaaatgattttaagggacgacattctctttataccgttggtaag
aattaccgcgtggtgatcaaatatattgatggccctcatattttaggagttttgaaccat
catgataagaaagaagatttgaacatactctcagagcgaccaagtgtcatttttaacgcg
agcactgatgctctagttgagaaagttgaacacatggaagtcgaatctggcaatttagaa
gaaatggctttatgtaaaatacagagaattagaacagtttcacagtgttccacagatagt
attgagagcataacgagtggcagtaacagtaaagataaagatgcagtaacagtaaagatt
ataaacaaagaaaagttaaaaacgttaataactgacagtgcccctcagtatgatgaagag
acattaaatgaaaatcagaaaaaaagaagattagaaaaaagacatttacgattgttggag
aaaaagagaaaagttgaagatggtgaggaggaaattaatgaaactattgacatagaagag
gccaatggagtgacttcacctgacactagctgtgcattagaagacccgtgtaataaggaa
aatatccaggatgaaagtattgctaaaaaggcaaagagaaaacaattgaagaaagataaa
aaagcgagtaagaaggctcggaagacacaggcaaaggttgacttgacagaggattcctgc
cttgcattgggcactggttttgtatgggaggtcccagacactgctggtgatatgggaaaa
gagtgttcagagagtgaagatgaagtggacgttaaaggaaagaaaacaaaaaagctaaca
aaagcagagcaacaaatactggcaagacaggaggagaagcttttgcatgagttggagctg
gctcggctggagaaggaccggttacccgagtctgctctggactatgaagaactcctacag
cgtagtcccaactcttcagctttgtggattcagtttattagctttcatctagagagtgta
gaaattgacaaagcaaaggcagtggctcatcgtgctcttcaagttattgatattcgtgaa
gaagaagaacgtctcaatatatggacagtgttgttacgacttgaagtttcttatggcact
ccagaatctgttgccgagacttaccgtgaagcactggccaccaatgaccaattaaaagtg
cacatggctatggctatggtatatgctgagagcaataaattaaaggaagcagaaaaagtg
tatttcataatgactaagaagtttagtcagaatcgtgatgtttggatcaaggcaggaatt
ttcttctttagcaatagtatggcagatgaaggaagacgttacatggatagagctcttctt
tctctggataaaagtgatcatgtagaattgattaatcgctttggtcaacttgagttccgt
tttggtgaggctgaacgaggcagaactatttttgaaagtcttcttagtaattatccaaag
cgcattgatatttggagtgtgtacattgatatcttggcaaaaaaggaagatattgaagga
gcaaggcacgtgttggagcgtatgacaggactaaagctgagacttcgtaaaatgcgttct
atcttcaagaagttcttggactttgaaaaggaacatggaagtcctcagagtgtagaggct
gttaggaagagagttgaggagtttgtgacctcagcactccatcaagacgtttag
DBGET
integrated database retrieval system
