Procambarus clarkii (red swamp crayfish): 123755006
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Entry
123755006 CDS
T07930
Symbol
Ndc1
Name
(RefSeq) LOW QUALITY PROTEIN: nucleoporin NDC1
KO
K14315
nucleoporin NDC1
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123755006 (Ndc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcla03019
]
123755006 (Ndc1)
Messenger RNA biogenesis [BR:
pcla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
123755006 (Ndc1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
123755006
NCBI-ProteinID:
XP_045593349
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All DBs
Position
28:complement(3563426..3572658)
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AA seq
553 aa
AA seq
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MKPEELFSKEVLLWRYVRALACLLLLQVVAPMAVCNLYHTVVAQGVWNPVTIVSNLVTSC
IYPTKLMRLVVPAVCFVLLARVHIKSYAVSAWVPLNRWEKWRRILSLTVLFRSGLIMIAC
ALLANFYTSLAHPDFPFFLRACMPGDIMCLKRKTLIMFMGVYMGYHYSYKYFMANGNVVT
PAPAHPRKLQLIKASLSLQNLRDACNTYGASKLSFLFAICFYMAVAIAISLMYGGTWQEW
LVIFDLSLMMMTMLATVLLAISLALFSQVFHIFITEPVEIPVATEEDSNPEADGCSWRLC
HALSSSGLLQLLAFYDLKSLAASDPRNFARRSQVFTISQPGGHPRNWLGIVNPSLNLIRK
FCERLRKHNCPESLPKVSPVPAGTGFAPTDVNKNEVAKLPQVPLKERLINVIMGLKRFPI
FGYFLSDLPDSTNRSIFAEGLPVIWAIQALGDLTAASFTEDKYGVVQRNIPDILMAFTQL
QKVVDGLGRVTLARRAGTGESLPAELQLRKALRFSLRSALYTITTTFGHTVLEMQVSCEC
QNKLLSYLEFKEG
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgaagcccgaggagctcttctccaaggaggtgttgctatggcgatatgtgcgagccttg
gcgtgcctgttgctgctgcaggtcgttgccccgatggctgtgtgcaacctgtaccataca
gttgttgcccagggagtttggaatccagttaccatcgtctcaaatcttgtaacgtcgtgc
atctatccaacgaaactgatgcgtctggtggttcctgctgtgtgttttgtcttgctggca
agagtccacattaagtcgtacgctgtgagtgcatgggtgccgcttaaccgctgggagaag
tggagacgaattctttccctgacggtactcttcaggagtggcctcattatgattgcttgt
gcactattggcgaacttttatacgtccctcgcacaccctgacttccccttctttttaagg
gcatgtatgcctggggatatcatgtgccttaaacgcaagactctgataatgttcatgggt
gtgtatatgggatatcactatagctacaagtacttcatggccaatgggaatgtggtgacg
cctgcccctgcacacccacgcaaattgcagttgatcaaggcaagcttgagcctccagaac
ttgcgggatgcctgcaatacctacggggccagcaaactttcatttttgtttgccatttgt
ttctatatggctgttgcaatagcgataagtttgatgtatggtgggacgtggcaagagtgg
ctggtgatctttgacttgtcactgatgatgatgaccatgctggccactgtgcttctggcc
atcagtctcgccctcttctctcaggtcttccatatttttataacagagcctgttgagatt
ccagttgccaccgaagaggacagcaaccctgaagcagatggatgctcatggaggctttgt
catgccctcagctcctctggtctcctccaacttctagcattctatgacctcaagtcactg
gcagcttcagaccctagaaactttgctagacgttctcaagttttcaccatcagtcaacca
ggtggtcatcctcggaactggctcggcatcgtgaatccctctctcaatctgattcgtaaa
ttctgtgaaaggctccgtaaacacaactgcccagagagcctccctaaggtgtcccctgtt
cctgctgggacaggatttgccccaactgatgtcaacaagaatgaagttgccaagctgcca
caggttccacttaaggagagactaataaatgttataatgggtttgaaaagatttccaata
ttcggatattttttgtctgaccttcctgactccactaaccgaagcatcttcgctgaaggg
ctgcctgtcatatgggctattcaggctcttggggacctgacagcagcatccttcacagaa
gacaaatatggtgtagtacagaggaacataccagatatactaatggctttcactcaactg
cagaaggtggtggatggcttgggtcgagtaacattggccaggagagcaggcacgggggaa
agtctacctgctgagttacagttgaggaaagcactcagattttccctcagatcagcatta
tacacaatcaccacaacttttggccatactgtattggagatgcaagtatcatgcgagtgt
cagaataaattgctgtcttacttggaattcaaagaaggttga
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