KEGG   Procambarus clarkii (red swamp crayfish): 123755619
Entry
123755619         CDS       T07930                                 
Name
(RefSeq) aly/REF export factor 2-like
  KO
K12881  THO complex subunit 4
Organism
pcla  Procambarus clarkii (red swamp crayfish)
Pathway
pcla03013  Nucleocytoplasmic transport
pcla03015  mRNA surveillance pathway
pcla03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pcla00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    123755619
  09122 Translation
   03013 Nucleocytoplasmic transport
    123755619
   03015 mRNA surveillance pathway
    123755619
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pcla03019]
    123755619
   03041 Spliceosome [BR:pcla03041]
    123755619
Messenger RNA biogenesis [BR:pcla03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     123755619
    TREX complex
     123755619
Spliceosome [BR:pcla03041]
 Complex C
  Other components
   EJC/TREX
    123755619
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    123755619
SSDB
Motif
Pfam: RRM_1 FoP_duplication
Other DBs
NCBI-GeneID: 123755619
NCBI-ProteinID: XP_045594296
LinkDB
Position
43:complement(22106076..22110473)
AA seq 233 aa
MSKPGTSRLRSRQVLADEDLCDVFDIISDNNAWIEDYHDNVDESCNNGGVQKRGLRSRHQ
AGPAKIFISNLNVGFSRADLHDFFARQGDICETAIYYDRFGKPMGAAHVVFEKRTDAVRA
QKKYDGFKLFGRKVSVKIDDGSSSEEMTIKSSTKKPTSLNDSGNGESDKRRSGATTGRGG
GRGAAAARRAATAKKQAAEQLQAELEAFVSQVHLSDSTPRDCEYDREHNFLDQ
NT seq 702 nt   +upstreamnt  +downstreamnt
atgtccaagccgggcaccagccgcctacgctccagacaggttttggcagatgaggatctc
tgtgatgtgtttgatattatctctgataacaatgcctggatcgaagattatcatgataat
gtggatgaaagttgtaacaacggtggagtccagaagagaggactccgctctcgccaccag
gctggtcccgccaaaatcttcatcagtaacctaaatgttggtttctcgcgcgctgacctt
cacgacttttttgctagacaaggagacatttgtgaaacagccatatactacgatcgcttt
ggaaagccaatgggcgctgcacatgtagtttttgagaagcgaacagatgcagttagagct
cagaaaaaatacgacggttttaaactttttggccgaaaagtgagcgttaaaatcgatgat
ggatcatcaagtgaagaaatgacgattaagtcatcaaccaagaagccaacatctttgaat
gattcaggtaacggtgagagtgacaagcggagaagtggcgccaccactggtcggggtggt
ggcaggggggcagcagcagcacggcgagcagccacagccaagaagcaggctgctgaacaa
ctacaagctgagctggaggcttttgtcagccaggtccacctcagtgacagcacccctaga
gattgtgaatacgaccgtgaacacaactttttagaccaatag

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