Procambarus clarkii (red swamp crayfish): 123756405
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Entry
123756405 CDS
T07930
Symbol
alphaCOP
Name
(RefSeq) coatomer subunit alpha isoform X1
KO
K05236
coatomer subunit alpha
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcla04131
]
123756405 (alphaCOP)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcla04147
]
123756405 (alphaCOP)
Membrane trafficking [BR:
pcla04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
123756405 (alphaCOP)
Exosome [BR:
pcla04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
123756405 (alphaCOP)
Exosomal proteins of bladder cancer cells
123756405 (alphaCOP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_Prp19
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_CDC20-Fz
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML_2
TPR_COPA_B
WD40_Gbeta
EIF3I
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
WD40_RFWD3
Beta-prop_WDR41
Beta-prop_Aladin
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_RIG_2nd
NBCH_WD40
zf-Tbcl_FmdE
Motif
Other DBs
NCBI-GeneID:
123756405
NCBI-ProteinID:
XP_045595486
LinkDB
All DBs
Position
25:4372689..4429938
Genome browser
AA seq
1241 aa
AA seq
DB search
MSFESRLMRSFVDERTMLTKFETKSARVKGLSFHSKRPWVLASLHSGIIQLWDYRMCTLV
DKFDEHEGPVRAVCFHQQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTEFHQE
YPWILSASDDQTIRIWNWQSRSCVSILTGHNHYVMCARFHPTQDLIVSASLDSTVRVWDI
SGIPGKPGGLRKKNVSPGMGGIGGSDDHHTRNPELFSAGDATVRHVLEGHDRGVNWAAFH
PTLPLVISGSDDRQVKLWRMNDCKAWEVDTCRGHYNNVSCVMFHPRQELILSNSEDKSIR
VWDMAKRICLHTFRREHDRFWVLAAHPSLNLFAAGHDSGMIIFKLERERPAYALHGNLLY
YVKERFLRRLDLTKNKDVAVMQLRAGSRAPVHSMSFNPAENAVLLTTRTHNMDNSNYDLY
QIPKDSDPQNPDSPDSKRSAGLTAVWVARNRFAVMDKSHQLVIKNMQNEVTKKVTTPPCD
EIFYAGTGMLLLRDSDGVSLFDVQQKRVLGTARIAKCRYVVWSASMTTVALLSKHTILVC
NRKLERLCSITETNRVKSGSWDDSGVFVYTTSNHIKYALTNGDHGIIRTLELPVYVTRVS
GSSVYCLDRQATPRVLTIDSTEFRFKLALVQRKYDEVLQMVRGAKLVGQSIIAYLQKKGY
PEVALHFVKDERTRFLLALECGNIDVALDAAKALDDKGCWEKLAEHALLHGNHPVVEYCY
QQTKNYDKLSFLYLITGNLAKLRRMMKINEIRKDYEGWYTNALYLGDVPERIRVLKACGK
TSLALLMAATHGHTQEAESLASHVEGGTIPEPLPNAQLLQPPVPVQPMDTAWPLLTVAKG
FFDTAVASGKSGGGTVAAMAVDITGDIAGDGWGDDDEETGDGDMALEGGDGEGGGWEVDD
DLELPPELEGAVTVGGADGEDGYFVPPPRGHPPTHGWTQRSQLAIDHILAGAFESATRLL
HDQVGVVNFEPYRDLFLSSFAHSRTSYPGAPALPSLFAYPSRNWRTAQTKDQLPALGLKL
SSLMDKLKEASQLTTAAKFSEAVEKFKAILLAVPLIIVDTKQEVSEAQNLLRVCKEYVVG
ISMELHRKGLGKSSEEELQRSLELAAYFTHCELQPGHQILTLRTAVNLAFKMKNYKMAMS
FGRRLVNLGPRPEVAQNIRKVVQACEKNPVDEMVVQYDEHNPFTVCAKSYVPIYRGKPEV
QCPLCGASYLPEHKGITCRVCSVAQVGKDSIGLRISPLQFR
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
atgagtttcgagtcacgattaatgagaagttttgttgatgagcgcacaatgttaacaaaa
tttgagaccaagagtgcaagggtaaagggtttatcctttcattccaagaggccatgggtc
ctagccagcttgcacagtggcatcatccagttatgggactatcgtatgtgcacacttgtg
gataagtttgatgaacatgaaggacctgtccgtgctgtttgcttccaccagcagcagcct
ctctttgtgtctggtggtgacgactacaagatcaaggtatggaactacaagctgcggaga
tgtctcttcacactacttggacatctggactacatccgtactaccgagtttcatcaggag
tatccatggattctgtctgcctcagatgaccagacaatacgtatttggaactggcagagt
cgttcatgcgtgtccatcctgactggacacaaccattatgttatgtgcgctcgcttccat
ccaactcaagatttaattgtgtcggcttcgttggattctacagttcgagtgtgggatatc
tcaggtattcctggcaaaccaggaggtcttcgcaagaagaatgtatctcctggtatgggt
ggtattgggggaagtgacgaccaccacacccgcaacccagaactgtttagtgcaggggat
gccacagtacgccatgtgttggagggtcatgaccggggggttaactgggctgcattccat
cccacactgccgctggtcatctctggttcagatgaccgccaggttaaactttggagaatg
aatgattgcaaggcgtgggaagtggacacctgccgggggcactacaataatgtgtcctgc
gtcatgttccacccaaggcaagagttgattctttccaactctgaggacaagtccattcgc
gtgtgggacatggcgaagagaatatgcctccacaccttccgtcgagaacatgatagattc
tgggtcctggctgcacacccctcgctcaacctgtttgctgctggacacgacagtggcatg
atcatttttaagctggagcgggagagacctgcttatgccttgcatggaaacctcttgtat
tatgtgaaggagcgctttctacgtcgccttgacttgacaaagaacaaggatgttgctgtc
atgcagctgcgtgcaggttcccgggcaccagtacacagcatgtccttcaatccagcggaa
aatgcagtcctcctcaccactcgtacgcacaacatggacaacagcaactatgacttgtat
cagataccgaaggattccgacccccagaaccctgattcccccgattccaagagatctgct
gggttaacagccgtgtgggtggccaggaaccgctttgccgttatggacaaaagccaccag
ttggtgatcaagaatatgcagaatgaagttaccaaaaaagtaacaactcctccctgtgat
gagatattttatgcaggcacaggcatgctcttgcttagagacagtgatggggtctctctc
ttcgatgtccagcagaagagagtactgggaactgctcgcattgccaagtgccgctatgtt
gtgtggtctgctagtatgactactgtggccctgctctccaagcatacaattcttgtttgc
aaccgcaagcttgaacgtctctgctccatcacagagaccaacagagtcaagtcgggttcc
tgggatgatagtggtgtatttgtttatacaacaagtaatcatatcaagtatgcactgaca
aatggcgaccatggcatcatccgcactctggagctgccagtatatgtaacacgggtatct
ggtagctcggtgtattgtctggaccgtcaagcaacacctcgtgtcctcaccattgactcc
acagaattccgcttcaaattggcactagttcaacgcaagtatgatgaagtgctgcaaatg
gttcgtggcgccaaactggtgggacagtcgatcattgcatacttgcagaagaaaggttac
ccagaagttgcccttcattttgtgaaagacgagagaacacgatttctcttggccttggag
tgtggaaatattgatgttgctttagatgctgccaaggctcttgacgacaagggatgctgg
gagaaactggcagaacatgcactcctgcatggcaaccacccagtggtagagtactgttat
caacagaccaagaactatgataagctctccttcctatatctcatcactggaaatttggcc
aaacttcgacgcatgatgaagatcaatgaaatccgcaaggattacgagggctggtacacg
aatgctctgtatctgggagatgtgccggaacgcattagggttctgaaggcatgcggcaag
acgtcgctggcacttctgatggctgccactcacggccacactcaggaagcagagtccctt
gcatcccatgtggagggtggcaccattcctgaacctctacccaatgcccagttgttgcag
ccacctgtgccagtccaaccaatggacacagcctggccactactcactgttgccaaaggg
ttctttgacactgctgtggccagtggaaagagtggtgggggaactgtggcagccatggct
gttgatattactggtgatattgctggagacggttggggcgatgacgacgaggagactgga
gatggtgacatggccttagaaggtggagatggtgaaggtggaggctgggaagtggatgat
gaccttgaattgccacctgaattggaaggagcagtcacggttggtggtgctgatggggaa
gatgggtactttgtgccacctccaaggggtcatcctcccacacacggatggacacagcgc
agccaactggccattgaccatatactggctggtgcttttgaatctgccaccaggctgttg
cacgatcaagttggtgtagtgaactttgagccgtatcgtgatttgttcctgtcatcgttt
gcccactctcgcactagttatcctggtgccccggccctcccatctctctttgcctaccca
agtcgtaattggcggacagcacagacaaaggatcagttgcctgctcttggtttaaagctg
tcaagtctaatggataaattaaaggaagcgtcgcagctaacgaccgcagccaaattttct
gaagccgttgaaaagtttaaagcaatcctcctggctgtgcccctcatcattgtagacaca
aaacaagaggttagtgaagcacagaatttgctacgtgtgtgtaaggagtatgtggttggc
attagtatggagcttcatcgtaaaggcctcggtaaatcgtcggaggaagaactccaacgc
tctctcgagttggctgcatacttcactcattgtgagctacagcctggccaccagattctt
actttaagaactgctgttaatttggcattcaagatgaagaattacaagatggcaatgagc
ttcggacgtagactggtaaatctgggaccaaggccagaggtggctcagaatatcagaaaa
gttgtacaggcctgtgagaaaaaccctgttgatgaaatggtagttcagtatgatgaacac
aatcccttcactgtgtgcgccaagtcatatgtgccaatatacaggggtaagccagaggtg
cagtgcccattatgtggagcatcatacctgccagagcacaagggcatcacctgcagagtc
tgttctgtcgcccaagtagggaaggactccattggcctacgtatttctccattgcagttt
cgatag
DBGET
integrated database retrieval system
