Procambarus clarkii (red swamp crayfish): 123756729
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Entry
123756729 CDS
T07930
Name
(RefSeq) uncharacterized protein isoform X1
KO
K24055
leucine-rich repeat-containing protein 7
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pcla04990
]
123756729
Domain-containing proteins not elsewhere classified [BR:
pcla04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
123756729
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_14
LRR_8
LRR_4
PDZ
LRR_LRWD1
PDZ_2
LRR_R13L1-DRL21
PDZ_6
Motif
Other DBs
NCBI-GeneID:
123756729
NCBI-ProteinID:
XP_045595962
LinkDB
All DBs
Position
26:complement(7184953..7279312)
Genome browser
AA seq
1706 aa
AA seq
DB search
MPSLFACFMCGGRGESDDIRTLDYCHASLSDVPADVFACERTLEELHLDSNQLSELPRQL
FYCHGLRVLGLSDNELSSLPPAVASLINLTTIDLSKNAISDIPDNIKGCKQLSVVNASTN
PLCRLPEGFTQLLSLQELYLNDTFLEYLPANFGRLSRLRVLELRDNQLNTLPKSIARLTS
LQRLDIGQNDFSELPEVIGSLGSLTELWFDNNKVKSLPPLLGRLKKLVHVEASKNKVDWV
AGEIENCVMLTDLHLSSNDLKELPEQLGGCHQLQVLKLDDNALTHLPESIGELSALEELV
VTRNDLETLPASVGLLRALHTLHVDDNVLTELPPELGSCSRLTVLTAASNSLTSVPAELG
HLPRLTILNLCGNLIPHLPVSLTKLKLRALWLSENQNKPQVQLQSETLPETGQRVLTCFM
LPQQRDQQSETVVEADTFPGQSWDEQRRAKTLIKFAFEGDVDKPGRLTRAPTPYPKELKA
LAKHARNLHSLQKDPARQFVLGRSQDLNKTSSSSIVASTKDEMETDSSRKGVDNPLKQPL
LDQSSNACPRDDDSMEVEEIGSPLTVVEPRVEERPLLRQARNVRNSYGNTPVVGTLISEN
NFTLTNGAKNITSSAANALSTDQPYTIGDRKVFGHAQVVAMTQSREKTVIDPNKSVASVA
EDCKSQQNTPSVVEPLPLSSHEASNTFTSPSAANSELANEAVDKRIKKPPPYHIAAVMSR
HAANFNESSVEPSLIPSGALGSNGHAVMESNGLQQSSAASPATSAAAAAAAAEDENNDTS
SSSDSGYGNGKASSQQITDEQHCSDGSGINTPSSPQNLTDSGFSMPSSLSSPQGSADVTS
LYSVKSFTVPISATTPQTSSISAPAVPANVPISTNSYSRATSQNVPSTISPSSSVSRPSY
DSLQKSLSRTGDVHNLPYNVATSSARPASIATGTQLENCNTRVVHRPGSLALGTLADSAL
LNRLPRDHRPGSLAAPINTLGIPPAPARAASHMGLNVMAPSRSNDFQMFKSQDLTRTRQG
WTPDHQSSSGAPNHRQESNGLVSIIDQVTSSLLEHGDSPPPKMPACEVPQSFDSTSMTTV
PSTGYSQTATQSGTSDASIKAAITSVESGLCSGIDTSGSHEYQDNSSSGGRVSSDGPANF
TQDQPRGEVLHPTPHWPNLSSTSRHTHDSLQDSVSSAQNPLCDSQETDSGASESETNQSS
DTESSVGHSEGTLSPLKVTSKPQSRIPALITEVPFPEIKTINKDPHSSSHTSHSLHESRI
PTFSCMGRNSSSLTNDAHSSVESRIPTLVSISKSSSSLAQERRNFAESQIPTLSSKGANV
NNSMYDKQAQCDTRLPVLGNVGHNSHNAVFDAQSLSESLKSLGYNSNAESQITSDSRIPV
MGLMGRTSSNLTREALGINTGKLPSPDVTIGNKNFPLNKPLVTGSNGSSIPLMSLQSRCN
SNQGSSLPSLGNISTTMPGDSNRHLVSYGHVSSPQNYQDAGHVYISTRLPSPGYSSGIRP
PTVHSPSQQQQQPAIQSHLRGYPSGIRPPMVNTAINTPGIPLPSPISPSNHLTNPGSRGS
ITSTGSASRIPMASGGTPSRLPAPGCNKHRISPAVTPSPDSNKASQSAWMFGQHKNARVV
CQNFPVVIEKNPDLGFTIGQSHTDPEDKSIYVTSVAGGGAASSALKVGDKLLQVDGADLR
SADLLIATSILHKTSNTVNLMVSRLQ
NT seq
5121 nt
NT seq
+upstream
nt +downstream
nt
atgccgtccctgtttgcgtgcttcatgtgtggggggagaggggagagtgatgatattcga
acactagactattgtcatgcttctctctctgatgttcctgctgatgtctttgcctgtgag
cgtacccttgaagaactgcatcttgattctaaccagttgagtgaactgccacggcaatta
ttttactgtcatggtctgcgagttcttggcctaagcgacaatgagctttcatcgttacct
cctgctgtggcatccctcatcaacctcactaccatagacctcagcaagaatgctatttca
gacattcctgataacattaaagggtgcaagcagcttagtgtggtaaatgccagcactaat
ccactgtgccggcttcccgaaggttttacacaattgctgtcattacaagaactttacctc
aacgatacatttttggaatatctacctgcaaattttggacggctgtcgcggttaagggtt
cttgaacttcgtgataatcaacttaacacgcttcccaagtccattgcacgccttactagt
ttacagcgtcttgatattggacaaaatgatttttcggaactgcctgaggtgattggcagt
ttgggaagcctgactgaactatggtttgataataacaaggtaaagtcactgcctcctctt
ttgggacgacttaaaaagctggttcatgttgaagcctccaagaacaaggtggactgggta
gctggtgaaattgagaactgtgttatgctcacagatctacacctctcttctaatgatctt
aaggaactgccagaacaattgggtgggtgtcatcagttacaagtgttgaagcttgatgat
aacgctttgactcatcttcccgagtccattggtgagctgtcagctcttgaagaattagtg
gttactcggaatgatttagagactttaccggcatcagtgggcctcttgcgagctctacac
accttgcatgttgatgacaacgttttaacggagctaccaccagaattaggttcgtgttct
cgactaactgttctcactgctgcttcaaactccctcaccagcgtgccagcagagcttggt
cacttgcctcgcctaactatacttaatctgtgtggcaatctcatacctcacctaccagtg
tcacttaccaaacttaagctgcgtgccttgtggttgtccgagaatcagaacaagccgcag
gttcagctgcagtccgagactctgcccgagacaggtcaacgtgtccttacatgtttcatg
ctgcctcaacaacgtgaccagcaatcagaaactgttgtggaagctgatacctttcctggc
caaagttgggatgaacaacgccgagcaaaaactctcattaaatttgcttttgaaggagat
gtggataagccaggccgcttaacacgtgctccaacaccatatccaaaagaattaaaggca
ttggcaaagcatgctcgaaatttacacagcttgcaaaaggatccagctcgtcagtttgtg
cttgggcgtagtcaggatttgaataaaacatcctcctcttccatagttgcttctactaag
gatgaaatggagacagattcatccagaaagggagtggacaacccattgaagcagccatta
ttagatcagtctagtaatgcttgccctcgtgatgatgactcaatggaggtagaggaaatt
ggctcaccattaacagttgtagagccacgcgtagaagagcgcccgttgctgcgtcaggct
cgaaatgtgcgtaactcttatggaaacacacctgtagtgggaaccttgatcagtgagaat
aatttcactctgacaaatggagcaaagaacattacttctagtgcagcaaatgctttgtct
acagaccaaccttatacaataggtgacaggaaagtttttggtcatgcacaggttgttgca
atgacccagtctcgagaaaaaacagttattgatcctaacaagtctgttgcatccgttgct
gaggattgtaaatcgcagcaaaatactccctctgtagtggaacctttaccactgtcatcc
catgaggcctccaacactttcacctcgccatcagctgcaaacagcgaattagcaaatgaa
gctgttgacaagcgtattaagaagccgccaccatatcacatagctgctgtcatgtcgagg
catgctgcaaatttcaatgaatctagtgtggagccttccttgatacctagtggagctctt
ggcagtaatggacatgctgttatggaaagcaatggattacagcagagttcagctgcatct
cctgccacttcagcagcagcagcagcagctgcagcagaagatgaaaacaatgacaccagc
agctccagtgacagtggctatggtaatgggaaagcatccagtcaacagattactgatgag
cagcactgtagtgatggcagcggtatcaatactccatcttctccacaaaacctcacagac
tccggcttctctatgccttcttcattatcgtcgcctcaaggcagtgcagatgtaacttct
ttgtattctgtgaaatcattcactgtgccaatatctgcaacaactccccaaacttcctcc
atatcagcacctgcagtccctgctaatgtaccaatatcaacaaacagttattcacgggct
acctctcagaatgtaccttcgaccatatcaccatcgtcgtctgtgtctcgtccttcttac
gactccctgcaaaagtcgctctcaagaactggtgatgttcataacctgccttacaatgtt
gccacatccagtgccagaccagcttctattgccactgggacacagttggaaaactgcaac
actcgagtggtacatcggcctggatcccttgcattgggaaccctcgcagactctgctcta
ctgaacagattgcctcgtgaccatcggccaggatccttggctgcgcctatcaacactttg
ggtatcccaccagctcctgccagagctgcgtcccacatggggctaaacgtaatggctcca
agtagatcaaatgacttccaaatgttcaagagtcaagacttgactcgtacaagacaggga
tggacaccagaccatcagagttcaagtggtgctcctaaccaccggcaagagagtaatggt
ctcgtctccattattgatcaggtgacaagcagcttgttagagcatggtgatagtccacca
cccaagatgcctgcttgtgaagtgcctcagtcatttgactcgacctcaatgacaacagtt
ccttctactggatattctcagactgcaacacaatctggtacatcagatgcctctatcaaa
gctgcaattacatctgttgagtcaggtttatgttcaggaatagatacaagtggttctcat
gagtaccaggataatagttcctcaggtggcagagtctcttctgatgggcctgcaaatttt
acacaggatcagccacgtggagaggtgctgcacccaactccccattggcccaatctctct
tcaacttcaagacatacccatgattccttgcaagattctgtatcatctgcccagaatcct
ctctgtgattctcaggaaacagacagtggcgcatcagaatctgaaacaaatcagtccagt
gatacagaaagtagtgtgggacattctgaaggtactctgtctcctcttaaggttacatca
aaacctcaatcaagaattcctgctctaatcacagaagtgccttttcctgaaattaaaaca
attaataaagatcctcacagttctagtcacacttctcattcgcttcatgaatcccggatt
cccactttcagttgtatgggacgtaattccagttcattaaccaatgatgcccactcgtca
gtggaatcaagaataccaactcttgttagcattagcaaaagttcaagcagtttagctcaa
gaaagaagaaactttgcagagtcacagattcctacacttagttctaaaggagcaaatgtt
aataattcgatgtatgataagcaagcacaatgcgacactcgtttgcctgtattaggcaat
gtgggacataactctcataatgcagtgtttgatgcccagtctttatcagaatctctgaaa
tctctgggttacaactccaacgctgaatcccaaattacaagtgactctcggatcccagtg
atgggactgatgggcaggacgtcaagtaacttgacccgtgaggcacttggcataaacact
ggaaaacttccaagcccagatgtaactatagggaacaaaaatttccccctcaacaaacca
ctggtgacagggagtaatggatccagtattccgttgatgtccttgcagagtagatgcaac
agtaatcaaggttccagtttgcctagccttggaaacatttcaactaccatgcctggtgac
tccaacagacaccttgtttcttatggacacgtttccagtccccagaattatcaagatgcg
ggacacgtatatatatccacacgacttccatctccaggatattcatcaggaattcgacca
cccacagttcattcacctagtcagcagcagcagcagcctgctattcagtcccacttgaga
ggatatcccagtggtatacgtccacccatggtaaatactgccatcaacacaccaggtatc
ccattaccatctcccatctcaccaagcaaccacttaacaaaccctgggtcccgaggctcc
atcacctccactggctcagcttctcgcataccaatggcttcaggagggactccatctaga
ctgcctgctccaggctgcaacaaacaccggatttcaccagctgtaacaccatccccggat
agcaataaagccagccaatcagcatggatgttcggccaacataaaaatgcccgagtggta
tgtcagaatttcccggtagtgattgagaagaatccagacctaggctttaccattgggcag
tcccatacagacccagaggataagagtatttatgtgacaagtgtagcaggtggaggagca
gcttcttcggcacttaaagttggagacaagcttttacaggttgatggtgccgatttacgg
tctgctgatttgttgattgccacctccatcctccacaaaacatcaaatactgtcaattta
atggtttctcgcctacagtga
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integrated database retrieval system
