Procambarus clarkii (red swamp crayfish): 123756746
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Entry
123756746 CDS
T07930
Symbol
Gapvd1
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcla04131
]
123756746 (Gapvd1)
Membrane trafficking [BR:
pcla04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
123756746 (Gapvd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
RasGAP
DUF5601
Motif
Other DBs
NCBI-GeneID:
123756746
NCBI-ProteinID:
XP_045595996
LinkDB
All DBs
Position
26:complement(8277725..8321501)
Genome browser
AA seq
1573 aa
AA seq
DB search
MGSLQADIGELAHHLKQERLFLEAEKHQIQLLNEKVRKTIERAYHASWVRGEQQRNYDDL
VLRPHSSPPACCQKANLLNQLKFIDGYKVLGFNESLYGDLLSSLRENPRLVARCLAMGES
QSQEAMQVTARTVFSSIYANCVLPDDETYVLNLLKHLMELQLATSETPRRLLRHGSCAFS
QIYRAYVDTLPQAKVFLTAALHQPIVQLLMEDELFLDIDPSKAAVRFPAEERLRRFGKEG
TPEYNAALAKYRAWTIAKLVKIADRFMESIKEAMNCFPPQLSWLVRILYDVLLTAKRADT
REVSAICVDLVFAFFLCPALVTPEPHGICDAPISHISRFNLIQVAQILQVLAMSRWETPD
HRLSDLYSHFEKEVICGVVDGILESGGSEAPPPGVSCLNSPLSTLVRSSCLIPEPRLHAL
VAFMYTILSELPEDDEMRKDLETSIGRLKPSHLSPAPPATSALSTPNTAKKNLLGRVKSN
RVKANKSQSEGSGDSDSLGSLQESTVSSSSHLPGQSSIDEGDVMPPPLDYDTVLVISLNT
SSPPECPGLMSEEKVLSTVQTKSTSRVRMNVEDEGDGGGGEATIEKRTRFSLSHDEGSIG
NTSDNLEAISEAASNHSVASSLDDVEQVEDQPDNLSDMVSANVSGRGTPNVSGRDTPSSQ
VTEGEEAGLRSGEENQPPPPNVPVTVPKPARADIEEKFGRFEIKPLIGGDETISLVSDTW
STDVLASDSETIEAADRADRGDQFHDQLLNRHLAELDRMQGDYLSGDATGETFETASEAW
STDVLASDSERMTEFDTDDAQSVARSDDTGRSEVEVELGGSDLLRRETLHQEDIVTPRAH
GSRSPVDATLSGAMGGSSSGGILKPMPVLPSSLTTDSGNSIPSGILKPIPVLQHRSGRPA
TPPRVEFQPIHPAEEDQCLMDRLPSDREEEELPQEEQEIASATQSLGRLSLNLSTLPNNG
IVSGDQHLLLNTFIGDGSRGRSNAPLMDLGNNSEGGHIVVHPHHKLVSSDRGSGEDSSLH
LSTTSLASSSSSGSDVVGGSGKLRSTSNASSGPTTDSIDTPEPSAPAISMAATGAIPKSI
SFDKTAERGDRDAIDGDAKHKRGFFKNFKLPGFKGRRKPGSRPGDDTAYIRSGLNSQDLN
IRRALSEENRPPTIEETSDDILAKYRNKKPEMDTSETDGMVSTQHNIQVNEIAKTEEDER
LFIDPSSIETSYAFADAKRKLRLVLSIADFSMSPYLPEFGAPTGTDSSLDNDVVTWLRCQ
LAEATNLHDRSLVAQLHETLRCVQLFDSQGREHLVRSLVEDYRSRSPYVAYLVRSRQGLL
TTIAHLEKLLSRINADGAVVMSSIVGVCVRMFLERREQNLSRFTHDFTVLTVPDEKVQLV
ENFLTQLFSELERDPMWISSTNEQLHAAQLALERVVMSHIYIHALYPNGDGDVSRDQVLH
EHMKKLAAVITPTHKDLRIPKLYQYECPWPSAQAEIVCISAYKTPGDKLQCVVRASQTIM
NLLSLAHDQSVPAADDFMPVLVYVLIKANPPALLSTVQYVNLFFEKRLKGEDQYWWTQFC
AAIEFIKTMDYML
NT seq
4722 nt
NT seq
+upstream
nt +downstream
nt
atgggaagtctacaggcagacataggagagttggctcatcacttgaagcaggaacgatta
ttcctagaggcagagaagcatcaaatacaattgttaaatgaaaaggtaaggaaaacaata
gagcgagcgtaccatgcttcatgggtgcggggagagcagcaaagaaactacgatgacctt
gtacttcgtcctcactcttcgccacctgcgtgctgccagaaggcaaatctcttaaatcag
ctcaagttcattgatggatacaaagttctgggattcaatgaatctctctacggtgatttg
ctttcaagcctgcgtgaaaacccaagacttgtcgcaagatgtctggcaatgggagagagt
caaagccaggaagcaatgcaagtcactgccaggacagtattttcttccatttatgccaac
tgtgtcctcccagatgatgaaacttacgtcctcaacttactgaaacacttaatggagtta
cagctggcaacttcagagaccccacgtcgattgttacgtcatggctcttgtgctttcagc
cagatataccgagcctatgtggacacgcttccccaagccaaggtgttcttgacagctgca
ttgcaccagccaatagtacagctacttatggaagatgaattgttccttgatatagaccct
tcaaaagctgctgttcgctttcctgccgaggaacgtctcagaaggtttggtaaagaagga
actccagaatacaatgctgccttggcaaagtatcgagcatggactattgccaagcttgtc
aaaattgctgacaggttcatggagagtattaaggaggcaatgaattgctttccacctcag
ttgtcttggcttgtcagaattctttatgatgtgctattaacagcaaagcgagcagacacc
agagaagttagcgccatctgtgtagatctggtgtttgcatttttcctctgcccagctctt
gtcacaccagaacctcatggaatctgtgatgcaccaatctcccacatctcaaggtttaat
cttatacaggtagctcagatcctccaagtgttggcaatgagtcgctgggaaactcctgat
cacagactctctgatctctactcgcactttgagaaggaggtaatatgtggcgtcgtggat
ggaattctagagagcggagggtctgaggcgccacccccaggagtctcctgccttaacagc
ccactgagtactctagtccgttcgtcttgcctcattccagagcctcgtctacatgcactt
gttgctttcatgtatactatactgagtgaactaccagaagatgatgaaatgcgcaaggat
cttgaaacatccattggccgcctcaagccgtcacatctctcacctgctccaccagccact
tcggccttatctaccccaaacacagctaaaaaaaatttgttaggacgagtgaaaagtaac
agggtcaaggctaacaagagtcagagtgagggaagtggtgactctgattctcttggatca
ttgcaagagtccacagttagcagttccagccatctaccaggccagagcagcatagatgaa
ggggatgtaatgccgccgccattagactatgacacagttttggttatctcgctcaatacc
tctagtcctcccgagtgccctgggctgatgtcagaagaaaaagttctttcaacagtgcag
acaaaatcaacatcacgtgtgagaatgaacgtagaagacgaaggtgatggtggtggaggg
gaggccactatagaaaaaaggacacgattttcactttcccatgatgaaggctcaattggc
aacacctctgataatttagaagcgattagtgaggctgcaagcaatcacagtgttgcgtca
agcctagatgatgttgagcaggtagaggatcaacctgataacttgtcagacatggtgtcg
gcaaatgtgtcaggccggggaactcccaatgtgtcaggccgtgacactccctcatcacag
gtaacagagggtgaagaagcaggcctgagaagtggagaagaaaaccagccccctccacct
aatgtccccgttacagttcccaaaccagcaagagcagatattgaggaaaaatttggacgt
tttgaaatcaaacctctaataggtggtgatgaaactatatctttagtgtctgacacttgg
agcactgatgtcctagctagtgactctgaaactattgaagctgcagacagagcagaccgt
ggggaccagtttcatgatcagctattaaatcgacatttagcagaattagatagaatgcaa
ggagattacctgagtggagatgcaactggagaaacttttgaaactgcctcggaagcttgg
agcacagatgttttagcctcagactctgagagaatgacagaatttgacaccgatgatgca
cagagtgttgcccggtcagatgacacgggccgatcagaagttgaagtggagctgggtgga
agcgacttgctgagacgtgagactctacaccaggaagatattgttacacctcgtgcacat
gggtctcgttctccagttgatgcaacattgagtggggccatgggaggaagcagcagtgga
ggaatactgaagccaatgcctgttttgccttcttcattaactacagattctggtaacagc
attcctagtggtattctaaaacccattccagtattgcaacatagaagtggcagaccagca
actccccctcgagtagaatttcaacctatccatcctgctgaagaagaccagtgtcttatg
gacagattgccatctgacagagaagaggaagagttgccacaagaagaacaagaaattgca
tctgccacacaatctttagggcgtttaagcctgaatctttcgacactccccaataatggc
attgtatcaggtgaccaacatcttttgcttaatacttttattggtgatggtagtagggga
agatccaatgctcctcttatggatttgggtaataatagtgaagggggacacattgttgtg
catcctcatcataaacttgtgtccagtgatcgtggctcaggagaggacagcagcttacat
ttgagtacaactagcttagcatcttccagcagttctggatctgacgtagtcggaggctct
ggcaagcttcgctctacctctaatgctagttctggacccacaacagactcaattgatacc
ccagagccaagtgcaccagctatcagtatggcagccactggagcaataccaaaaagtatt
agttttgataaaacggctgaaagaggggatcgtgatgctattgatggtgacgcaaaacat
aagcgaggatttttcaaaaattttaagctccctggttttaagggccgccgtaaacctgga
agtaggcctggtgatgatacagcatatatacgttcaggacttaatagccaagatttgaat
ataagacgagctttgtctgaagaaaatcggcctcctacaattgaagaaacaagcgatgat
attctggcaaaatacagaaataagaaaccagaaatggatacttcagaaacagatggcatg
gtctctacgcaacataatatacaagttaatgaaatagcaaagactgaggaggacgaaaga
ctgttcatagacccaagcagtattgaaacgagttacgcctttgctgatgccaaaagaaag
ttgcgactagtattgagcattgcagacttctccatgtctccatacttaccagagtttggg
gctccaacaggaacagattccagcttagataatgatgtggtgacatggttacggtgtcag
ttggctgaagcaactaaccttcacgaccgttccctcgtggctcagttacatgaaaccttg
cgctgtgttcaactctttgattctcagggtcgtgaacatctcgttagaagtttggttgag
gactataggagcagatctccttatgttgcttatcttgtccgtagtagacaaggcttactt
acaactattgcacacctagaaaaacttttatcaagaataaatgctgatggggccgttgtg
atgtcatccattgttggggtttgtgttcgaatgttccttgagcggcgagaacagaacctc
agtcgcttcactcatgacttcactgtgctcactgttcccgatgagaaagtacaacttgtg
gaaaatttcttgactcaacttttttccgagcttgaacgggatccaatgtggataagtagc
acaaatgaacagttgcatgcagctcagttagcactggagcgggtagtaatgtcccacatc
tacatccatgctctctatcccaatggtgatggagatgtatctagggaccaggtgttacac
gagcacatgaagaaactagcagctgtgatcactccaacccataaggatctcaggatacct
aagctgtaccagtatgagtgtccttggccaagtgctcaggctgagattgtgtgcatcagt
gcatacaagacaccgggtgataaattgcagtgtgttgtgagagcctctcaaaccattatg
aatctgctttcccttgcacatgaccaatcagttcctgcagcagatgacttcatgcctgtc
ctagtctatgtgctcattaaggccaacccgccagcacttctctccacggtgcaatacgtg
aatctcttctttgagaagaggctcaagggagaggaccagtactggtggactcagttttgt
gcagctatcgaattcatcaagactatggactatatgctatga
DBGET
integrated database retrieval system
