Procambarus clarkii (red swamp crayfish): 123757125
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Entry
123757125 CDS
T07930
Symbol
Prp39
Name
(RefSeq) pre-mRNA-processing factor 39 isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcla03041
]
123757125 (Prp39)
Spliceosome [BR:
pcla03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
123757125 (Prp39)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
HAT_Syf1_CNRKL1_N
TPR_14
HAT_Syf1_CNRKL1_C
NRDE-2
TPR_16
TPR_19
TPR_12
TYA
Motif
Other DBs
NCBI-GeneID:
123757125
NCBI-ProteinID:
XP_045596486
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All DBs
Position
13:15062169..15088535
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AA seq
731 aa
AA seq
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MEGQTEMEMPSSPLLSEMIKDEILDGESTEPFSDEAEVCLKEEEEEDGGEGSMLKRPAST
CLSEDEPSSKKRSNEVDKLWRNVHDNPNDFQAWTLLLQHIDQVSDLESGREAYDGFFERY
PYCYGYWKKYADLERRKGTKETTCKVFNRGLDAIRLSVDLWLHYMEYITTQFPDDEAFVR
QEFERAMDTCGLEFKSDKLWESYIAWESAGKRWKNVTLLYERILGTPTSKYMQHWQKFQE
HVKKHLPSEIVGVDEFLSLRREVLVELNRSDIETPDEAPPGVEAAPGDEHVGTNVVSSKL
VLPHQYDILKIKDEETKALQKNIIAARQKIHDANVIEVKALWSYEDAIKRPYFHVKPLEK
SQLTAWRNYLDYEIKHMNPARIRVLFERCLIACAFYEEFWMRYIRYLEEAGAVEGDIRSV
YQRACVIHLRERFRPHLSWAAFEEEKGNSDRSLEILEDVQTRVPGSLEAWMQAAGVERRR
NNLVAATEVFSRCLQQCQEREDKNAHSHVSLKLARFHTLFDNAPDKAVEILKEAHDYNKE
NGNVLLALVDQALICRPPKFDEAIQALKEGVENCQQPGNRLMFAHRLFHFMTECGQDASS
VSEGLRVLRQVQMEMRQMDSAMAEIDTASNTSKQGDVTGGGIAVVESRREKRSSQEKSSP
GPMNGTTNNTNQTMVANYQGYQQSGYGGYNQGYTHGYGASHYQGWGYPTQQGGYGYGQQG
WGTYGNYYGQR
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggaaggccagactgaaatggagatgccctcatctccccttctaagtgagatgattaaa
gatgagatattggatggggaatcaacagagccattttcggatgaagcagaagtttgccta
aaggaggaggaggaggaagatggaggtgaagggtctatgttaaagcggccagcaagtaca
tgtctttcagaagatgagccttcaagtaagaaacgctcgaatgaggtagacaagttatgg
agaaatgttcatgataatccaaatgacttccaggcatggacattgttgttgcaacacatt
gatcaagtgagtgatttggaatctggtagagaagcctatgatggattttttgaacgttat
ccatattgctacggctactggaagaaatacgcagacttagaacgacgcaaaggcactaaa
gaaaccacctgcaaggtatttaatcgagggttggatgcgatccggctgagtgttgacttg
tggctccattacatggagtatattactacgcagtttcccgacgatgaagccttcgtgcgt
caagagtttgagcgagcaatggacacttgtgggctggaattcaagtcagataaattatgg
gaatcttacattgcctgggagagtgccggcaagaggtggaagaacgtgacattactatat
gaaagaattttaggaacgccgaccagtaaatatatgcagcattggcagaagttccaggag
catgtgaagaagcatttgccaagtgaaattgttggtgtagatgaatttttgagtttacgt
cgtgaagtgctggtagaactgaataggtcagacattgagactccagatgaagctcctcca
ggtgttgaggcggctccaggggatgaacatgttgggacaaatgtggtttcatccaagttg
gttctcccacatcagtatgacatcttaaaaatcaaggatgaagaaacgaaggccctacag
aagaacatcattgcggctcggcagaaaatccatgatgctaatgtgattgaagttaaagcc
ctatggagttatgaagatgctatcaagaggccttacttccatgtcaagcctctggaaaag
agccaactaactgcttggagaaattatttggattatgaaattaaacatatgaatccagct
agaataagggtgttgtttgagaggtgcctcattgcctgtgccttttacgaggaattctgg
atgaggtatattcggtatttggaagaagcgggagcagtggaaggagacattcgatcagtg
taccagcgggcgtgtgtcatccaccttcgagaaaggttccgtcctcatctctcttgggca
gcctttgaagaggaaaaaggtaatagtgaccgttcactggaaatccttgaagatgtccag
actcgtgtaccaggcagtttagaagcttggatgcaggctgctggggttgagcgccggaga
aacaacctggttgctgcaacagaagtattttctcgttgcctccagcaatgtcaagagcga
gaagataagaatgctcactcccatgtatctttgaagttagcaagatttcacacattattt
gacaatgctcctgataaagctgtagaaattctgaaagaagcccatgactacaacaaggaa
aatggaaatgttttacttgcactggtggatcaagccctcatatgtcggcctccaaagttt
gacgaggcaattcaagctctgaaggaaggtgttgaaaattgtcaacagccaggaaacaga
ctcatgtttgctcatagacttttccatttcatgactgaatgtggtcaggatgcaagtagt
gtgagtgaaggtttgagggtgctgcgtcaggttcagatggagatgcgacaaatggactct
gctatggcagaaattgatacagctagcaacaccagcaagcagggagatgtgacaggcggt
ggtattgctgtggttgaatcgagacgagaaaaacgcagcagccaagaaaagtctagcccg
ggacccatgaatggaactacgaataacaccaatcaaacaatggttgccaattaccaggga
taccagcagtcaggatatggaggttacaaccaaggatatactcatggttatggtgcatca
cattatcagggctggggttaccccacccagcaaggcggttatggatatggacaacaaggc
tggggaacatacggcaattattacggtcaaagataa
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