Procambarus clarkii (red swamp crayfish): 123757173
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Entry
123757173 CDS
T07930
Symbol
Pms2
Name
(RefSeq) mismatch repair endonuclease PMS2 isoform X1
KO
K10858
DNA mismatch repair protein PMS2
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla03430
Mismatch repair
pcla03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
123757173 (Pms2)
03460 Fanconi anemia pathway
123757173 (Pms2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcla03400
]
123757173 (Pms2)
DNA repair and recombination proteins [BR:
pcla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
123757173 (Pms2)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
UfSP_MPN_N
Motif
Other DBs
NCBI-GeneID:
123757173
NCBI-ProteinID:
XP_045596579
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Position
13:complement(13332880..13350216)
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AA seq
982 aa
AA seq
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MADLALEADEATSTSDVAKSIKPIDKTTVHRICSGQVVLTLATAVKELVENGLDAGATSV
EVRLRYHGTTLLEVSDNGKGVEERDFEGLTLKHHTSKIQDFGDLVGVKTYGFRGEALSSL
CALSDLTVTTRHTSQEVGTKLVYDHNGKLVTRTPVSRQVGTTVSLQGLFSTLPVRHKEFH
RNIKKEFSKMVQVLYSYCLISTEVRITCTNHTDKGKKSIVVSTSGHSTVKENISSIFGVK
QVSSLLELQQESASSDVLAEYGVDSDIVATQENTLFTLEGYVSSCAHGQGRSAADRQFYF
INSRPCDPARVTKVVNEVYHHYNRHQFPCVVLNIRLKEDDVDINVTPDKRQILINNEKLL
LATIKTSLIRLYENIPSSYSMQNTSMSSPLSNSFNNAYGSPKPAVASPLASTMASTGKVS
ALSQRFGHRPLGSPTSEVFPPSQGGLKRSLSYGFSSNSSPNNKQPKLTSFLKKSKLEEAD
VGSCDETSAALAATSSLEGIQPLSDQWASEDRTEETVEEEEEDSVHDMGLEEKENRLESV
EMEMSDEVPVACQGNTQDNLENSLDFPNTQDLNDLSNSKGPDESHWQSDADNHNHNTNNN
ELEKNEPKSECLSNNTRTNLNGISVLKKMSTFSRSLPTSLMSKKAHNATNEFLSNLLAKK
SGINGGKNVSAKCSHLSNEHTNDKCEEVEIVFEDLAPKDAEDLETPKEDIHNTELPSRKV
MLCEDYNASEFTGKRKSKQIIFSLETLRARISASKAKAAHEDIIRKFRAAINPMDNAAAE
DELRKEISKDMFAKMKILGQFNLGFIIVCLGSDLFIVDQHATDEKYNFEILQQTCTLQNQ
RLIIPQTLELTAVNESILLDNIEIFKKNGFEFKVEEDKPVGRRVALVSMPFSRGWEFGRE
DIEELIFMLSDAPGIMCRPSRVQAMFASRACRKSVMIGTALTHTQMQKLVCHMGEIEQPW
NCPHGRPTMRHLINLDIIAAPR
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccttgctctagaggctgatgaggccacgagcacctcggatgtagccaagtcg
attaaacctattgacaagactactgttcaccgcatttgttctggccaagttgtgttaaca
ctcgcaacggctgtcaaagagctggttgaaaatggtctagatgccggtgctaccagtgtg
gaggtgcgtcttcgttatcatggaaccacgctcctggaagtctctgataatggaaaggga
gttgaagaacgggattttgaaggcctgaccttaaaacaccatacttcaaagattcaagat
tttggggacctagtcggagtgaagacatatggttttcgtggtgaggctctcagttcactg
tgtgcactcagtgacctcactgtcacaacacgccataccagtcaagaggtcggaacaaag
ttggtgtacgatcataatggcaaacttgttaccagaactccagtatcgagacaggtaggc
acaacagtctcactacaaggactcttctctaccctgccagtgcgacacaaggagtttcat
cgcaatatcaagaaagaattcagtaaaatggtccaagtgctctactcttactgtttaata
tctactgaagtcaggataacatgcacaaatcatactgataagggcaagaaaagtattgtt
gtgtcaactagtggacattcaactgtaaaggaaaacatctcttcaatttttggagtcaaa
caggtttccagtttgctagagttgcagcaagaaagtgcctcatctgatgtattagcagag
tatggagtggactcagacattgtagctacccaggagaacacactgttcactttggaagga
tacgtatcatcgtgtgcccatggtcagggacgctcagcagctgatcgtcaattctacttc
atcaattcccgaccgtgtgacccagctagagtgacaaaagtagttaatgaagtataccat
cactacaaccgccaccaattcccttgtgtagtgctgaatatacgactcaaggaggatgat
gttgacatcaatgtcacccctgacaagcgtcaaattctcatcaacaacgaaaagctccta
ttagcgaccattaagacatccttgattcggctttacgagaacatcccttcttcatacagt
atgcagaatacatccatgagctcaccacttagtaactctttcaacaatgcctatggcagt
ccaaaacctgctgttgccagtccattggcctcaactatggccagtactggaaaagtgtct
gctcttagtcagaggtttggccacagacctctgggatcaccaacatccgaggtattccca
ccgtctcaaggtggtctcaagcgttctctctcttacggtttctcctccaacagcagccca
aacaacaaacaaccaaagttgacatcattcctgaagaaaagtaaattggaagaagccgat
gttggcagttgtgatgagacatcagcagctctagcagctacttcaagtctagagggcatt
caaccactgtcagaccagtgggcctctgaagacaggacggaggagaccgtggaggaggag
gaggaggatagtgtgcatgacatggggttggaggagaaggaaaaccgtcttgaatctgtt
gagatggaaatgagtgatgaagtgcctgttgcttgtcagggtaatactcaggataatttg
gaaaattctctggattttcccaatacccaagacttgaatgatttgtccaactctaaagga
cctgatgagagtcattggcaatctgatgccgataaccataatcataatactaacaataat
gaattagaaaaaaatgagccaaaatctgaatgtctttccaataatactagaacaaattta
aatggaatttctgtacttaaaaaaatgtcaacattttctcggtcactaccaacatcttta
atgagcaaaaaggctcataatgctacaaatgagttcttgagcaatcttcttgctaaaaaa
tctgggattaatggaggaaaaaatgtatctgccaaatgcagtcatttatcaaatgaacac
accaatgataaatgtgaggaggtggagatagtatttgaagacttagctccaaaagatgct
gaagatttagaaactcctaaggaagacatacataacactgaactcccctccagaaaagta
atgctgtgtgaagactataatgcaagtgaatttacaggtaagagaaagtcaaagcagatc
atcttcagtttagaaacattgagggcaagaatcagtgcttcaaaggcaaaggctgcacac
gaagatattatacgcaagtttcgtgctgcaataaaccccatggataatgctgccgctgaa
gatgagctcagaaaagagatttcaaaagatatgtttgcaaagatgaaaattttaggccag
ttcaatttaggtttcatcattgtgtgtctcggttccgacttgtttattgttgatcaacac
gctacggatgagaagtacaattttgagattctccagcaaacatgcactctacagaatcaa
cgactcatcattcctcaaacacttgagctaactgcagtgaatgagtcaatattgctcgat
aacatcgaaatcttcaagaagaatggatttgaattcaaggtggaagaggacaagcctgtt
ggtcgtagggtcgccctcgtatcgatgcctttcagccgtggatgggaatttggaagggaa
gacattgaggagcttattttcatgctttcggatgcacctggtatcatgtgtcggccatca
cgtgtacaggccatgtttgcatcgagggcatgtcggaaatctgttatgattggtactgcg
ctaacccatacacagatgcaaaagcttgtctgccatatgggtgaaattgagcagccatgg
aactgcccacatggaagaccgacaatgagacatcttatcaaccttgatataatagcagct
ccaagatga
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