KEGG   Procambarus clarkii (red swamp crayfish): 123757500
Entry
123757500         CDS       T07930                                 
Name
(RefSeq) superkiller complex protein 8
  KO
K12602  WD repeat-containing protein 61
Organism
pcla  Procambarus clarkii (red swamp crayfish)
Pathway
pcla03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pcla00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    123757500
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pcla03019]
    123757500
Messenger RNA biogenesis [BR:pcla03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     123757500
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR3_2nd WD40_CDC20-Fz Beta-prop_WDR36-Utp21_2nd EIF3I WDR55 WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st WD40_Gbeta Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_TEP1_2nd Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_WDR35_TULP_N NBCH_WD40 Beta-prop_RIG_2nd Beta-prop_ACSF4 WDR90_beta-prop_4th Beta-prop_Aladin WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_Vps41 Beta-prop_NUP159_NUP214 Beta-prop_WDR41 eIF2A Beta-prop_VPS8 Beta-prop_DCAF4 Beta-prop_Nup120_160 Beta-prop_NWD2_C Tricorn_2nd Beta-prop_SCAP WD40_like Beta-prop_SPT8 PROPPIN Beta-prop_IFT140_1st Cytochrom_D1 Beta-prop_DCAF12 Beta-prop_HPS5 DUF7899 WDR54 Beta-prop_RIG_1st PALB2_WD40 Ge1_WD40
Other DBs
NCBI-GeneID: 123757500
NCBI-ProteinID: XP_045597136
LinkDB
Position
19:complement(19787737..19796833)
AA seq 338 aa
MFSLLTKRENAHSEGIWSCAWGHFVPEEKKKDNEDNEKENGEENKENQVRRNEENLPDSE
QRYIVTGGLDDLVRVWCWSGDGVEGELTPMHTLEGHSLGVISVDVNAAGTTAASSSLDST
IRLWNLHSGEQLQTIDCGPVEAWSVVFSPEGNLIASGNHAGKINVYAVDGGRHVTTLDTR
GRFTYSIAYSRDGKYVASGAIDGFINVFDVESGKLVHTLEGHAMTIRSITFSPDSQLLLT
AADDGHMKMYDIKSSNLACTLSGHGSWVLSVDFARDQQHFVSSSSDHTVKVWDFAQRNCV
HTFKDHHDQVWCAKYSQDSSKIVSVSEDKSVIVYNSPV
NT seq 1017 nt   +upstreamnt  +downstreamnt
atgttttcattgctgactaaacgtgaaaatgctcattcagaaggcatttggtcatgtgct
tggggccattttgtcccagaagaaaaaaagaaagacaatgaagataatgagaaagagaat
ggcgaagaaaataaagaaaaccaagtgagaagaaatgaagagaatttgcccgactcggaa
cagaggtatattgtcactggaggcctggatgacttggttcgagtgtggtgctggtcaggt
gatggggtggaaggagagttgacaccaatgcacacacttgaaggtcactcactcggagtt
atatcagttgatgttaacgctgctgggactacggctgcatcatcgtctttagactcgact
attcgattgtggaatctccattctggtgagcagttgcagaccattgactgtggcccagtt
gaagcctggtctgttgtattttctcccgagggtaatctcatagcctcaggaaatcatgct
ggtaagatcaatgtttatgcagttgatggcgggcgtcacgtaacaacattagacacaaga
ggacgttttacttactcaattgcttatagtcgtgatggaaagtatgttgctagtggagca
atagatggtttcatcaatgtatttgacgttgagagtgggaagctggtacatactttagaa
ggacatgccatgacaattcgttccatcacattttcaccagactcgcaacttctcctcaca
gctgctgatgatggacacatgaaaatgtatgatatcaagagcagcaacttggcgtgtaca
ctctctggccacggctcctgggtgctgagtgtggacttcgctcgtgaccaacagcacttt
gtgtcgtcatcttctgaccacaccgtcaaggtctgggactttgcccaacgtaattgtgtc
cacaccttcaaggatcatcatgatcaggtttggtgtgctaaatatagtcaagacagcagt
aaaattgttagtgtatcagaagacaagagtgttattgtgtacaactctccggtctag

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