Procambarus clarkii (red swamp crayfish): 123757566
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Entry
123757566 CDS
T07930
Symbol
Dsp1
Name
(RefSeq) high mobility group protein DSP1 isoform X2
KO
K10802
high mobility group protein B1
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla03410
Base excision repair
pcla04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
123757566 (Dsp1)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
123757566 (Dsp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcla03036
]
123757566 (Dsp1)
03400 DNA repair and recombination proteins [BR:
pcla03400
]
123757566 (Dsp1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcla04147
]
123757566 (Dsp1)
Chromosome and associated proteins [BR:
pcla03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
123757566 (Dsp1)
DNA repair and recombination proteins [BR:
pcla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
123757566 (Dsp1)
MMR (mismatch excision repair)
Other MMR factors
123757566 (Dsp1)
Exosome [BR:
pcla04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
123757566 (Dsp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
HMG_box_5
FTCD_C
YABBY
Motif
Other DBs
NCBI-GeneID:
123757566
NCBI-ProteinID:
XP_045597273
LinkDB
All DBs
Position
19:complement(22471472..22483941)
Genome browser
AA seq
205 aa
AA seq
DB search
MPRAKLVDTKPRGRMSAYAFFVQTCREEHKKKHPDENVIFSEFSRKCADRWKTMTDKEKQ
RFYDMAEKDKTRYDTEMRGYRGPRQARATRKRRNRKDPNAPKRALSAFFWFSNDERPKVR
AANPDMGVGEVAKQLGAAWSNTPPEVKAKYEVMAENDKARYEKEMKAFKEGNFGAKKLKT
AVATEDDDDDESESEEEDDDDEEDE
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgccacgtgccaaattagtagatactaaacctcgtgggcggatgtccgcctatgccttt
tttgtacaaacttgtcgagaagagcataagaaaaaacatcccgatgaaaatgtgattttc
tcagaattttctcgcaagtgtgctgatcgctggaagaccatgactgacaaagagaaacaa
cggttctatgacatggctgaaaaagacaaaactcgctatgacacagagatgcgaggatac
agaggacctcgtcaggctcgtgccacacgaaaaaggcgtaatcgtaaggaccccaatgct
cccaagagagctctatcggcattcttttggttttccaatgatgaaagaccaaaagtgcga
gctgctaaccctgatatgggtgtgggagaagttgcaaagcaacttggtgcagcgtggagt
aacacaccacctgaggtcaaagcaaagtatgaagtcatggcagaaaatgataaagccaga
tatgagaaggaaatgaaagcctttaaggaggggaactttggagctaagaaactgaaaact
gcagttgccactgaagatgatgatgatgatgagagtgaaagtgaagaggaagatgatgat
gatgaagaggatgaatga
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integrated database retrieval system
