Procambarus clarkii (red swamp crayfish): 123757855
Help
Entry
123757855 CDS
T07930
Symbol
shtd
Name
(RefSeq) anaphase-promoting complex subunit 1 isoform X1
KO
K03348
anaphase-promoting complex subunit 1
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
123757855 (shtd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcla04121
]
123757855 (shtd)
03036 Chromosome and associated proteins [BR:
pcla03036
]
123757855 (shtd)
Ubiquitin system [BR:
pcla04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Other subunits
123757855 (shtd)
Chromosome and associated proteins [BR:
pcla03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
123757855 (shtd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Apc1_MidN
ANAPC1
APC1_3rd
APC1_C
PC_rep
Motif
Other DBs
NCBI-GeneID:
123757855
NCBI-ProteinID:
XP_045597691
LinkDB
All DBs
Position
40:6155053..6237332
Genome browser
AA seq
1983 aa
AA seq
DB search
MISCGDTQEFIPFGREYLGYHPGDVGLPPPRPSPAPPHLDLLRQLDTVSINGSKDWWELR
QSNDGLTEEELYVCGPTVVWSRGQAGSRQVIKCMTCDSTVQHILFATFYTYPDQPPLLGE
AVPEEPTGDALPSICVVESDSLNIFTEDGDDYFVALPFPVRKVWPVKYGILLERQVHSSE
MASPKPEAERLPTFYSLLHPLDEINPLLYRSGYSGCARPAYLSDLSQQAVFMSQEPSICI
LYNSSTSSHTIWKIRRAKLEENNFVLQSSVQSNSPVSSMLSNPGSFVQLHSYSHSHSLSQ
SHAYVTSPPAQVPSHSPTPTSSRTRSSMFPTILNTPKTQPSQTPRSHMATLSRTQSPSVF
GGQHLRLAMSPSPSRSPGPRTPRSQFSSLNETFIEPEPLVPDVCLDHLWTDHSLARATKA
FLTEDSVGQKYLCLMLSQAGMLRCIKYDYSNDRSSLIFGSISSIPAKDALPVKSLRMMIV
VDGSSSLSLYTGAVHVSRINLCGLPTFNSSLFKDFSSLNISSRLHSPSTTPLRRSSLLTS
SRPTSAVDAKFDVGLSPVITEKSHMDGSFTEDPNLPISSAIVSLRDPSDTRVTLEHANGN
YYRITLPEIASSPVVKHSLAALKYVLPREAALQLVNKWYATRNAPGSGDFSPHGEWTMFS
MMLLSMIGYDTDKLALTCPVEASDSCTLVATKKFRAAESGSDNDWEYMLSSPLHMAAGNS
LSEMLGLQKVGVMQKPKEVSNGTVHTKSPLFSHLPSILFALHLVYEDFKLNTLNWEFCSL
LVTCLDQLASDLRLTQYLHHYWRDFPTVCPLQGPPSQVPLEESKKFTYVGYFTEKPPHVL
AHLYTIMGGIEPQPFPYIPHVCTTTKNLILLYSVAAADCGLHNIPMEHFLKQINSSNPKP
FASADVSLNLQNYCENNPKIHEKIVLLTDQLGLTVRDIQLLSPGVSLVLMNAQHMCRTCP
PENWPASAYHLIHRPDLVAHREGDAKNEGDGGKRSKDPFNIKVRMQEEKKPSPSSTKEDD
DGMETLDTDMLALRWREDQRIAEVRRMLCSSRAVTINIVQRPEVSDHDFLEEQERHLYAL
CIRTMSLPVGRGMFTLFTSAPIITETLPIPKLNLSGKAPPRGTTIDLSNIEVPPNMDMWP
HFHNGVAAGLKIAPNCGEIDSTWIVYNKPKGTLDSPTNHAGFLMALGLNGHLRNLATVNM
HDYLARGHEMICVGLLLGISVAKRGTMDIQTTKLLSVHLECLLPPTSTELDVPHTVQVAA
IIGVGLVYQDTAHRHMAEVLLQEIGRPPGPEMENSNDRESYSLAAGLALGLVLFGRGGEA
AGFTDLNIAGELYHYIEGGHKKPLFGIHKDKYKSPSYQIKEGECVNIDVTAPGATLALGM
IYFQSNNKAIGEWMVAPSTPYLLDQVRPDFLLLRTVALGLIMWDSVMPTSQWIESHVPLT
VLTHVHRGGNQSTPGIDYESMHQAYYNILAGACMVIGLKFAGSSNSEAFQILWKYTRMFT
NFTKRSVAELAGKSTIETCLNVILLSLSMVMAGTGDLDVLRIIRYLRSRVGPSNSTVGYG
SHLTIHMALGFLFLGGGRFSLGTSNMAIAALLIACFPKFPTHSNDNRYHLQALRHLYVLA
AEPRLLMPIDVDTGRLCQVSVTVRFSDTPQYTNQSYEAMAPLMLPELSKLSQVIIEGDAV
NHRYWPIRFSAQNKTWAFLETILCSGEGLAVKLKDGRYPYGDAPSGFQAQLAHLLTQDKS
ARWTIKGSVLEEVSGCSARLVSTMVGGLSPLSSSSAAASTSSKVPSAACPSTSSTQLGID
DGETAFTQALVTIIYEYLSVGKPQAITNWLAALQGVRRVSVLSQRAGLLLWQVKLIGRAA
HFLHRLTCTAKETSTSGEEISGGEPSPLVSAEQALSLNKRLDLLTDTWLEEVREEVVRYL
RGDAEKQYSAKCAFTLVMRDLPLPLNFHECEGCSDPLALLAVLRRAKVPTIAISALANML
FQT
NT seq
5952 nt
NT seq
+upstream
nt +downstream
nt
atgatatcatgtggggatacccaagagtttattccatttgggcgggaatatcttggttat
catccaggggatgtgggtttgccgccacccagacctagtccggcaccacctcacttagat
cttttgagacagctagacacagtctctattaatggctctaaggattggtgggaattacgc
cagagtaatgatggattgacagaagaagaattgtatgtatgtggtccaacagtggtatgg
tcacgaggacaagcaggctcacgtcaagtaatcaagtgtatgacctgtgattctacagtt
cagcatatcttatttgctactttctacacataccctgaccaacctcccctgcttggggaa
gctgtcccagaagaaccaacaggagatgcactacctagcatctgtgtggtggagagtgac
agtctcaatatatttacagaagatggtgatgactattttgttgctttaccttttccagta
cggaaggtatggccagtaaaatatggcattcttcttgagcgccaggttcattcatctgaa
atggcatcccctaaacctgaggcggagaggctgccaacattttacagtttactgcatcca
ctagatgaaataaatcctcttctctatagaagtggttacagcggctgtgctcgacctgcc
tacttgagtgatttatctcagcaagctgtgttcatgtcacaagagccttccatctgcatt
ctttataactccagtaccagcagtcataccatatggaaaatacgaagggcaaaattagag
gaaaacaactttgtacttcagagcagtgttcaaagtaattctccagtgtcctctatgctg
tccaatcctgggtcatttgtacagttgcactcgtattcacatagtcattcactttcccaa
agccatgcatatgtaacttctcctcctgctcaagtaccttcccattcaccgactcctact
agctctcgtacaagatctagcatgtttcccactatacttaacactccaaagactcagcca
tctcagacacccaggagccacatggcaacacttagccgaacacagtcaccttcagtgttt
ggtgggcagcatcttagactggcaatgagtccttccccatctcgatctccagggccccgt
acacctcggtcacagttttcttctcttaatgaaacatttattgagcccgagcctttggtt
ccagatgtttgtttggatcacctgtggacggatcattcacttgctcgggccactaaggct
ttcctaacagaagatagtgttgggcaaaaatatctttgtttaatgctgtcccaggcaggg
atgcttcgttgcattaaatatgattattccaatgacagatcaagtcttatctttggctct
atatcctctatacctgctaaagatgcgttgccagttaaatcgctccggatgatgattgta
gttgatggaagtagcagtttatccttatatacaggagctgttcatgtcagtcgaataaat
ctctgtggattacccacattcaattcctcgctttttaaagatttttcgtcattgaacata
tcatcaaggctacatagcccatctacaacaccactacgtcgatcaagtctcctaacttca
agtagaccaacttctgctgtagatgccaaatttgatgtaggtctttctccagttataact
gagaaatcacatatggatggatctttcactgaagacccaaatttgcctatttcctctgcc
attgtatctctgagagatccatctgatacgagagttacattggaacatgctaatggaaat
tattacagaataactctcccagaaattgcatcatctccagttgtaaagcattccttagct
gcactcaaatatgtccttccacgagaggctgctctccaattggtcaacaagtggtatgca
actcggaatgccccaggatctggtgatttttctcctcatggggaatggaccatgttttca
atgatgctgttatcaatgataggctatgacacagataaactagctttaacatgtccagta
gaggcctcggattcatgtactcttgtggctacaaaaaagtttcgtgcagctgagagtggt
tcagataatgattgggagtacatgttgtcttcaccattacatatggctgctggaaatagt
ctgagtgaaatgctaggattacagaaagttggtgtgatgcaaaaaccaaaggaagtcagc
aatggtacagtgcacacaaaatcacctttgttttctcatctcccatcaattctttttgct
cttcacttggtttatgaagattttaaattaaacaccttgaattgggaattttgcagtctt
ctagttacttgtctagatcaactagcttcagatttacggcttactcagtacctacaccat
tattggagggattttcccactgtgtgtccattacaaggtccaccctcacaggtgccacta
gaggagtctaaaaaatttacatatgtagggtactttactgagaagccccctcatgtatta
gctcacttgtacactataatgggaggcattgagcctcagccttttccctacattcctcat
gtgtgcactacaaccaaaaacctgattttgctctactcagttgcagctgcagattgtggg
ttacataatatcccaatggaacattttctgaaacaaataaactcaagtaatccaaaacca
tttgcttcagctgatgtatcactgaatttgcaaaattattgtgaaaataaccccaaaatt
catgaaaaaatagtgctcttaacagatcaacttggattaactgtcagagatattcagctc
ctttctcctggcgtatcattggtcctaatgaatgcccagcacatgtgtcgcacatgtcct
cctgagaattggccagcctcagcgtaccacctcatccataggcctgatcttgttgctcac
agggaaggtgatgctaaaaatgaaggtgatggtggaaaaagatcaaaggatccttttaat
ataaaggttagaatgcaagaggaaaagaaaccatcaccatcctccacaaaggaagatgat
gatggcatggaaaccttggacacagacatgctggctctaagatggcgtgaagatcagcgc
atagctgaagtgagacgtatgctgtgctcctcgcgtgctgttacaattaacattgttcag
cggccagaggtatcggatcacgattttctagaagaacaagaaagacatttgtatgctctc
tgtattaggactatgtcgcttcctgttggtcgaggtatgttcactctgtttacttctgct
ccaataattacagaaactctcccgatacccaagctcaacctgtcgggcaaagctccacca
agaggaacaactattgatctttctaacatagaagtgcccccaaatatggacatgtggcca
cactttcacaatggtgttgcagcaggtctcaaaattgctcccaattgtggggaaatagat
tctacatggattgtatacaataaaccaaagggaacattggacagtccaactaatcacgca
ggatttctcatggcccttggacttaatggtcaccttcgaaaccttgcaactgtcaatatg
catgattatctagcacgaggtcatgaaatgatatgcgttggactactacttggcatatct
gtagccaagaggggaacaatggacatccaaactacaaaactactcagtgttcatttagaa
tgtctcttgccaccaacatcaaccgagctggatgttcctcatactgttcaggttgcagcc
atcattggagtgggattagtctatcaggacacagctcatcgacatatggcagaagtccta
cttcaagaaattggtcgcccaccaggcccagaaatggaaaattcaaatgatcgagagtca
tattctttggcggctggacttgctcttggcttggtattatttgggaggggtggggaagct
gctggctttacagatctgaacattgctggagaactttatcactacattgaagggggccac
aaaaaaccactatttggcatccacaaagataaatacaaatcaccaagttaccaaataaag
gagggtgaatgtgtaaatattgatgtaactgctccaggagccactctagctctggggatg
atatatttccaaagcaataacaaggctattggagagtggatggttgccccaagtacacct
tatttattagaccaggtccggcctgatttcctgctccttcgcacagttgctcttgggctt
atcatgtgggactctgtgatgccaacatctcagtggattgagagtcatgtacctttgacg
gtccttactcatgttcaccgaggtggaaatcagtctacgccaggaatagattacgaatct
atgcatcaggcatactacaacatattagctggtgcatgtatggtcataggattaaagttt
gctgggtctagcaacagtgaggccttccagattttatggaaatacacaaggatgttcacc
aatttcaccaagaggagcgttgctgagttagctggaaaatcaaccattgaaacttgtctt
aatgtaattctgctaagtctctccatggtaatggctggaacaggcgaccttgatgtactg
cgtatcatccgataccttcgatctagagttgggccttcaaattccacagttgggtatgga
tcccatctgacaatccacatggcattaggcttcttgtttttgggtgggggtcgcttctct
cttggcacgtctaacatggctattgcagcgctgcttattgcctgcttcccaaagtttcca
acacactctaatgacaatcgctatcatttacaagccttgagacacctctatgttttggca
gcagagccaaggcttttaatgcccattgatgtggatactggaagactatgccaagtcagt
gttactgtcaggtttagtgacacacctcagtacacgaatcagtcttatgaagctatggct
ccgctgatgttacctgaactgtcaaagttgtctcaagttattatagaaggtgacgctgtt
aaccatcgttattggcctatcagattttctgctcaaaacaagacctgggcttttctggaa
acaatattgtgttctggtgaaggtttggcagtcaagttaaaggatgggcgttatccatat
ggtgatgcaccttcaggattccaggctcagttagcccatttgctcacacaagacaaatct
gctcgatggacaattaagggctccgtgttggaagaagttagtggatgttcagcaagacta
gtgagcaccatggttggcggtttatctccattgtcttcatcttctgctgctgcctctaca
tcatccaaggttccctctgctgcatgtcccagcacgtcatcgacccagctcggcattgac
gatggagaaactgcatttactcaagcactcgttactattatatatgagtatttgtctgtt
ggcaagcctcaggctatcaccaattggctcgcagcactacagggtgtaaggcgagtttca
gttcttagtcaacgagccggactcttactgtggcaggtaaagttaattggccgtgctgct
catttccttcatcgtctaacatgtactgctaaagaaacttcaacatcaggtgaagagatc
agtggtggggagcctagtcctcttgtgtcagccgaacaagcattgtcacttaataaacgc
ttggaccttcttactgatacctggcttgaagaagtacgggaagaagttgtgcgatacttg
cgaggagatgcagagaaacagtattcagcaaaatgtgcctttacacttgtcatgcgagac
ttgcctttacctcttaattttcatgaatgtgaagggtgctctgatcctctggcactactt
gctgttttacgcagagccaaggtgccaaccattgcaatatctgcccttgcaaatatgttg
ttccagacctga
DBGET
integrated database retrieval system
