Procambarus clarkii (red swamp crayfish): 123757951
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Entry
123757951 CDS
T07930
Symbol
Ddx56
Name
(RefSeq) probable ATP-dependent RNA helicase DDX56
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcla03009
]
123757951 (Ddx56)
Enzymes [BR:
pcla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123757951 (Ddx56)
Ribosome biogenesis [BR:
pcla03009
]
Eukaryotic type
Pre-60S particles
Helicases
123757951 (Ddx56)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
AAA_19
Motif
Other DBs
NCBI-GeneID:
123757951
NCBI-ProteinID:
XP_045597899
LinkDB
All DBs
Position
40:18015665..18050270
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AA seq
559 aa
AA seq
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MSEEMEDEKTIQFHEMGLDDRILEAIARLGWKEPTLIQEKAIPYILEGKDVLARARTGSG
KTGAFVIPAIHKILEGKQKATEQTVQVLILAPSKELCKQIKENIGQLTVSCKREVRFVDV
SPQVSLEAQRPLLVDKPDIVIGTPMRVLAHLSAGNLKVKESLKFLVVDEADLMFAYDHLE
DIQAVLKQLPKIYQSFVTSATMWDDVKDLKKLVMNKPVVLRLEEPPLPTTTQLTQYVIKL
EKIDKVILINVLFRLNMIRGKTIIFVNNVDTGYKLRMYLGQFGISSCVLNSEMPVASRCH
IVEQFNNGKYDIIIASDEQMLKAQTNKKNAENKSKRKKDKESGIARGIDFQFVSNIINFD
FPRDVDGYIHRVGRTARGNNQGTALSLVSVNEMEIFKEVEAKLKELMPGSDSVFKDFKFD
TKQLDGFRYRALDAWKRCTSIAIRETRKKELKQELLNSNKLKSFFEDNPGDLKVLRHDKS
KHGLTPMTHLKHVPEYNIPVKLRNVSRVVNRRKINKKAPKADMDKGKFKRTTKTQQKYMK
RKADPLQSMEFSGFKKQKT
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaggagatggaagacgagaagaccatacaattccatgaaatgggcctggacgac
cggatattggaggccatagcaagattaggatggaaggagccaaccttgattcaagagaag
gctatcccatatattctggaaggaaaggatgttctggccagggctaggactggatccggc
aagactggagcatttgttattccagctattcacaagattcttgaaggaaaacaaaaggca
acagaacagactgtacaggtcctaattttggcaccaagtaaggagttgtgtaaacaaata
aaagaaaacattggtcagctgacagtttcatgtaaacgtgaggtgcgatttgttgatgtt
tctcctcaagtttccctggaagctcagcgtcctctccttgtggataaaccggacatcgtc
attggaacacccatgagggttttggcccatttatctgctggcaacttgaaggtcaaggaa
tccctcaagtttctggtggttgacgaagctgatcttatgtttgcttatgatcacctagag
gatatccaggcagtgttaaagcagttaccaaagatttaccagtcatttgtgactagtgct
acgatgtgggacgatgtgaaagatctcaagaaactggtcatgaataagcctgtagttttg
agacttgaggagcctccattgccaaccactactcagcttacgcaatatgtcattaagttg
gagaagattgacaaggttatcctgatcaatgttctgtttcgcctgaatatgattcgcgga
aagacaatcatcttcgttaacaatgttgatacgggatataagctaaggatgtacttagga
cagtttggaatcagctcttgtgtactcaactctgaaatgccagtagcctcaaggtgtcat
atagtagagcagttcaacaatggcaaatacgatattattattgcctcggatgaacagatg
ctgaaagcccaaacaaataaaaagaatgcagaaaataaaagcaaaaggaagaaagacaaa
gaatctggcattgcccgtggtatagacttccagtttgtttccaacattatcaacttcgat
tttccccgtgatgttgatggctatattcaccgtgttggacgaactgctcgaggaaacaat
cagggcacagctttatctctggtttctgttaacgaaatggaaatattcaaggaagtagag
gccaagttgaaggaactgatgcctgggtctgattctgtgtttaaggactttaaatttgat
acaaaacagcttgatggtttcagatatcgtgctcttgatgcttggaaacgttgcacttca
atcgctatccgagaaacgaggaaaaaggaacttaaacaggagttgctcaattccaataaa
ctaaaaagttttttcgaggataacccaggagaccttaaagttcttcgacatgacaaatca
aaacatgggcttactcctatgactcacctgaagcatgtgcctgagtataacattcctgtt
aaactgcggaatgtgtcgagggttgtcaacaggaggaaaattaacaagaaagctccgaaa
gctgatatggacaagggcaaattcaaacgaactacaaaaacccagcaaaaatacatgaaa
agaaaagctgaccctttgcagagcatggagttttctggattcaagaagcagaaaacctga
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