Procambarus clarkii (red swamp crayfish): 123757955
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Entry
123757955 CDS
T07930
Symbol
SMC3
Name
(RefSeq) structural maintenance of chromosomes protein 3 isoform X1
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcla03036
]
123757955 (SMC3)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pcla00535
]
123757955 (SMC3)
Chromosome and associated proteins [BR:
pcla03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
123757955 (SMC3)
Meiosis-specific proteins
Cohesin complex and associated proteins
123757955 (SMC3)
Proteoglycans [BR:
pcla00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
123757955 (SMC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_23
AAA_21
AAA_29
ABC_tran
Motif
Other DBs
NCBI-GeneID:
123757955
NCBI-ProteinID:
XP_045597906
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All DBs
Position
40:18141930..18200463
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AA seq
1200 aa
AA seq
DB search
MYIRQIIIQGFKSYREQTVIDPFDPRHNVVVGRNGSGKSNFFYAIQFVLSDEFNHLRAEQ
RQALLHEGTGPRVISAFVEIIFDNADGRIPIDKNEVCLRRVIGAKKDQYFLNRKAVTKLD
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERREESKVILK
ETQSKREKIEEFLRTIEDRLQTLEEEKEELKEYQKYDKMRRALEYTIHDRELKETRKKLT
DMENQRKNSGAEQEQFRQQLQKSQESIKTLSKDMKDVKSKLSQVKEERDTYNMEQQQLLK
EKTKLEFTIKDLTDEVQGDNKSKERAEKELQKLRSTISQKEAELEAIRPQYEEMKGREDE
AQHELSMKDQKRKELYAKQGRGSQFTSKEQRDQWIQKELRSLTKAVKSKQDQIQRLEDEI
IRDTDRRAHLDKKVEELSTDTENYRQSIDEHNKVFYEMKKRKDQLQSERNEHWRKENNLQ
QNVSSLKEELSRADQSLRSMAGKPILNGRDSVQKVLDTFRDRGGHLGEIATQYYGLLIEN
FECERSIYTAVEVTAGNKLFHHIVESDKIGTQILKEMNKQKLPGEVTFMPLNRLTVKDID
YPQTNDAIPMVSKLTYSQRYHKALKYIFGRTLICRNLEVATHLARSTRLDCVTLDGDQVS
SKGSLTGGYFNTSRSRLEIQKTRSELRDQITSAETELRTLQETLRNTEQEINKIVSEMQK
TEIKNSKAKNLFEKVKTDIRLMKEEQSGLERTKQPKERSLTQLKANLEAMMATKEGLESE
LHQDLMATLSVQDQHEVDQLNDDIRRLTQENKEAFTRRMKLEADKNKLENLLTNNLHRRK
DELMQALQEISVEDRKRQLEHSQSEIQRVDARIEEVAVQYKDVEKKVTEHQKKEKSLKSE
LEKVKSKEKEVMERMEEDAKDLEKMASKQNLLHQKIDECTKKIRDLGSLPSEAFDKYQNL
ATKQLFKKLEGANMELKKYSHVNKKALDQFISFSEQKEKLVMRKEELDRGYDKIKELMNV
LEHRKYEAIQFTFKQVSKYFSEVFKKLAPQGHAQLVMKSNRDEESEQEEQGTVDNFSGVG
IRVSFTGRNAEMREMNQLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDQALDAQHRKAV
ADMIHELSKDAQFITTTFRPELLEHANKFYGVKFRNKVSHVECVSREEAYDFVEDDQTHG
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
atgtacattagacaaattattatccaaggatttaagagttacagagagcagactgtcata
gacccttttgaccctcggcacaatgtagtcgttggtcgaaatggctctggcaagagtaac
ttcttctatgccatccagtttgtactaagtgatgaattcaatcaccttcgagccgagcag
cggcaggccctcctccatgagggtactggtcccagagttatttctgcttttgtggagatc
atctttgacaatgctgatggcaggataccaattgataagaatgaggtgtgcttgcgtcgt
gttattggtgccaagaaagatcagtactttcttaacagaaaagcagttaccaagcttgat
gtgatgaatcttctagaatctgcagggttctcacgatcaaacccatattacattgtcaaa
cagggtaagattaaccagatggcaacagctcctgactcccaaagattaaagttactaaga
gaagttgctggaacccgcgtgtatgacgaaagaagagaagagtctaaggttattcttaaa
gaaacacaaagtaagcgggaaaaaattgaagaattccttcggacaattgaggacagattg
cagacattagaagaagaaaaagaagagctgaaagagtaccagaagtatgacaagatgcgt
agggcactggaatacacaattcatgacagagagctcaaagagactagaaagaagttgaca
gatatggaaaatcagcgaaaaaactcgggtgctgagcaagagcagtttagacagcagctg
caaaaatctcaagaatccattaagacactgtcaaaggatatgaaggatgtgaagtccaag
ctgtcacaggtaaaagaagaaagagacacatacaatatggagcaacaacaacttctgaaa
gagaagacaaaattggaattcacaataaaagacttgacagatgaagttcaaggagacaac
aaatcaaaggaaagggcagagaaagaattgcaaaagcttcgaagtactatttcccagaaa
gaggcagaattggaggccattagaccacagtatgaagaaatgaaaggtcgggaggatgag
gcacagcacgagttgtccatgaaagatcagaaacggaaagagctttatgccaagcagggc
cgaggtagtcagttcacatctaaggagcagcgtgaccagtggatccagaaggagttaagg
tctctcaccaaagccgtcaagtcgaagcaggatcaaattcagcggctggaagatgaaatt
atacgcgatactgaccgcagggcccatcttgataagaaagtcgaggagctatccacagac
acagaaaactacagacagagtattgatgagcacaacaaagttttttatgaaatgaagaag
agaaaagaccagttacagagtgagagaaatgaacactggcgtaaggagaacaacctacag
caaaatgttagttctctcaaggaggaactgtcaagggctgaccaatctttacgttccatg
gctggcaagcccatccttaatggccgggacagtgttcagaaggtgttggatacgtttcgt
gaccgtggtgggcaccttggagaaattgccactcagtattatggtcttctcattgaaaat
tttgaatgtgagcgttccatctatactgctgtagaagttactgctggtaataagcttttt
catcatattgttgaatctgacaagattggcactcagattctgaaggagatgaacaagcag
aagttgcctggggaagttaccttcatgcctctcaacagactcacagtaaaagacattgat
tatcctcagactaatgatgccatccctatggtaagcaagttgacttactctcaacgatac
cataaagctctcaagtatatttttggccgcaccctcatatgccgtaatttagaagttgct
actcatctggctcgttccactcgtcttgactgtgttacgctcgatggagatcaagtgtca
agtaagggatcactaactggtggatacttcaacacttcacgatcccgtcttgaaatccaa
aagacgagatcagaattacgggatcagattacatcagctgaaacagagctaagaacttta
caagaaactttgagaaacacagaacaagaaataaataagattgtttctgagatgcagaaa
acagaaattaagaacagcaaagccaagaacttatttgagaaagtgaaaacagatattaga
ttgatgaaggaggagcagtcaggactggagcgcactaagcaacctaaggaaagatcattg
actcagctgaaagccaacttggaggccatgatggccaccaaggagggcttggagtctgag
cttcaccaagatctcatggccacacttagtgttcaggaccaacatgaggttgatcagctg
aatgatgacatcagacggctgacccaagaaaataaggaagctttcaccagacgtatgaaa
ttagaagcagacaagaacaagttggagaaccttcttacaaataatcttcatcggagaaag
gatgagctaatgcaggcattgcaagaaatttcagtggaggacaggaagcgtcaactggaa
cacagccagagtgagatccagagagttgacgcccgtattgaagaagtggctgtgcagtac
aaagatgtagagaaaaaggtcactgagcatcaaaagaaagaaaagagtttaaaatctgaa
ctagaaaaagtgaaatccaaagagaaggaagtaatggaaagaatggaagaagatgctaag
gacttggagaaaatggcatccaagcaaaatcttctgcatcagaagatagatgaatgcaca
aaaaagattcgagatttgggatctcttccctcagaagcctttgataaatatcagaatcta
gcaacaaagcaactttttaagaagttagaaggtgccaacatggaattgaaaaagtattca
catgttaacaagaaagccctcgatcagttcatttctttctctgaacaaaaagaaaaactt
gtgatgagaaaagaggagttagatagaggatatgacaagattaaggaactgatgaatgtc
cttgagcaccgtaaatatgaagctatccagttcactttcaagcaggtatccaaatatttc
agtgaagtgtttaagaaactagcccctcaaggtcatgctcagttggtgatgaaatctaat
agggatgaggagagtgagcaagaagaacagggtactgtggacaacttctcgggtgttggt
atcagagtatctttcactggaagaaatgctgaaatgagagaaatgaatcagctatcagga
ggtcaaaagtctcttgttgctcttgcccttatttttgctattcaaaaatgtgatccagct
ccattctacctctttgatgaaattgatcaggctcttgatgctcagcacaggaaggcagtg
gctgacatgatccatgagttgagtaaagatgctcagtttatcactaccaccttcagacca
gagctgctggaacatgccaacaagttctatggggttaagtttaggaataaagtttcccat
gtggaatgtgtgtcgagagaagaagcgtacgactttgttgaagatgatcagactcatggt
tga
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