Procambarus clarkii (red swamp crayfish): 123757974
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Entry
123757974 CDS
T07930
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
123757974
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcla04121
]
123757974
Enzymes [BR:
pcla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
123757974
Ubiquitin system [BR:
pcla04121
]
Ubiquitin ligases (E3)
HECT type E3
123757974
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WWE
WWE_5
Motif
Other DBs
NCBI-GeneID:
123757974
NCBI-ProteinID:
XP_045597966
LinkDB
All DBs
Position
40:complement(22156902..22344954)
Genome browser
AA seq
2426 aa
AA seq
DB search
MAERGEGTAGGSHSRATTSGAHTAATRNSRNQLVGSVVEGLESFGSPLPLRKRKIGITEV
VHTKRRNSDGPQEPAGGFSSITSNTTGATGTTSKRQRISSNSSNSDARYADSGDCADCGL
ESPASKRQRRSSHVESRSHSAASLAANAPSTPTRNQVAPRRSSRIVEKNKLSNVKAGQFA
CSKDLKISLKRNCKMTMLSSTSSGKGIETLLASTSSNTGKMSLKGSSLSSEIQNCRFVLK
GNLWSCDVSHTIPETNSAIINTKKKIKRPVSSRSIQTRQSNTYSSLNGCSNSHANKKETQ
RGKSRIDKMSIANDKKSDVGKTGRRNTQGATGQSLQTTSQKIQQNKVAGPSSQTGLIGQI
STVHPKERSMKNTNNLKQLPRSVSKQNGYKATQKLQNQSNVQALTSFALKPDSSNNVKPE
AKKSRIPISLSMTRLSHTKRSVNREEMVTHSATVRRKVKEEMTTSISGQPSNTEKSPGGG
GILKSYPLRNRLRLSDGGGGGGGGSGGNNPLTAGRLEQQGQSQSLPSSPSSQGVAFLADT
FRRLRESRRSSQEQSATSKRNTPQTKDSRQSAGTWKRTHGTKKSPLSSKRSSRSKTNNTG
SCASSSQHSSRGCGKVSFGSGGSGMSGSHGGHEGSSTSSGPPQASSHGACSTTGTTGGTS
STGVPPATTTASAALHVAPSTSTTSGLLPTASLATLGAIGGGSSSGASGGLAGSIGGLMG
APTDSESEENEMGRLETLLASRGLPPSLFGALGPRMQHILHRSVSSSISSKAQQLLVGLQ
ANGEESEQLQAVIEMCQLLVMGNEDTLAGFPIKQVTPALINLLNMEHNFDMMNHACRALT
YMMEALPRSSAVVVDAVPVFLEKLQVIQCMDVAEQSLTALDMLSRKHSKSILQAHGVSAC
LMYIDFFSTGAQRAALSITANCCQNLTADEFHFIADSLQLLSSRLTTQGDKKCVESVCLA
YSRLVDCFQNDPNRLQEIAGHGLLSNIQQLLVMSPPVLNSGTFIMVIRMLSFMCNNCPEL
AVQLLKNNIAHTLCYLLTNSTEPPGEQVELVSRSPQELYEITCLIGELMPMLPSDGIFAI
DGALQRPSSCPQDAALWQWQDATWQNYSTSDSRIIEHSHQSGEDEISLCIQGRAYTIDFH
SMQQINDNSGTMRSVQRRMMPVGLGGTVLTATQATDARAKCLCDDSELASNLIRSLFSLL
YEVYSSSAGPAVRYKCLRALLRMVQFSSPDLLQQVLKSQSVSSHLATMLSSHDLKIIVGA
IQMAEILMIKLPEIFAIYFRREGVMHQIKRLCDPDATLVTPAAKWNSPELSLGSGRVTNP
SSTSPLLTGRPFNGNCLDSTPSLPTPPNQDDDKLQSPSQLRLYDVLKRKRTARMRTGTWR
KSRQDDSTSSSSSFSEFFMKNAGLGGRDTWRGMANRTKLVTGNNSSNSTSNSSGGGGSGG
SSKSSFLANFNPSRWGRCNSATSTPSHESPAGKDKLVSNNISSSGSSSNNKEVVRVWVRD
QAQRLNQQYFTTELQGASHPALSVLNRLIAAIQQLEQEPNSAVQALREISRIVTESDISP
FEVIHSGLVRCLLTYLTASENTTLSLTHDGALLTAIGGVSSSSENGGLTAICISTPRDTR
LRNFLHVFLGCTLNTLSLGTVDTSHIALFSALITKLNGCVNQLEQFPVKVHDLPGTALSG
LGRGGSTSAIKFFNTHQLKCNLQRHPDCTRLRQWRGGPVKVDPLALVQAIERYLVIRGYG
RLRDEDDDNSDDDNSDEDIDDTLAAVSVNQSSSSHKLQFVINDHILPYNMTVYQAIRQFS
SPSDASASEADTDTETPISHSAIWLQTHTIYYRPLQEEEQSRSSGGRKGKAGGSKTSPKK
KADTFVGDGSIVGGNNSVLDQYLTANLPASVTVSDPSIEVLALLRVLHALNRHYGSLYPT
ACYPSPLPTAEFTNLKLTAKANRQLQDPLVIMTGNVPPWLPQIAYVCPFLFPFETRQLLF
YAVSFDRDRALQRLMDSSPELNSVDSSERVTPRLEKRKRTVSRDDILKQAESVISDLASS
RAMLEIQYDNEVGTGLGPTLEFYALVSKELQKADLELWRGETVTVEERTEDNPGKAVKYV
NASNGLYPLPVPRNMKSAHMTKLRTKFRFLGKFMAKAVMDSRMLDLGLHECVYKWLLSEE
WSLGLGDVTALDLTLGHTLDRLHATVLHKRRVTAQAEQEGISGIELQTRLDALTVDGCSV
EDLALTFTLPGYPNIEFRKGGSDISVTINNLDQYLQLVIEWLVREGVRRQMEALREGFEC
VFPLTQLHVFYPEELEQLFCGSSDASQWDMKQLAECCRPDHGYTHNSRAVKFLLQILSEY
TSAQQRSFLQFVTGSPRLPVGGFRSLTPALTIVRKTFEAGENPDDFLPSVMTCVNYLKLP
DYSSIDIMRAKLEIAAREGQHSFHLS
NT seq
7281 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcgcggtgaggggaccgcaggggggtcacactcacgagccaccaccagtggg
gcccacactgcggcaaccaggaacagcagaaatcagctggttgggtcagtagtggagggg
ttggagagtttcgggagtcccttacccttacgcaagcgaaagattggtatcacagaggtg
gtgcataccaaaaggagaaacagtgacgggccacaggagcctgctggaggtttcagtagc
atcacgtccaataccacaggtgctactggcaccacaagcaagaggcagaggattagcagc
aacagcagcaacagtgacgcacgttacgcagatagtggtgattgtgccgattgtggcttg
gagagcccggcaagcaagcgtcagcgtcggagcagtcacgtagagagccggagccactca
gctgccagcctggccgccaacgcacccagcacacccactcgcaaccaggttgcgccaagg
agatcatctcgtattgttgagaagaataagctgtccaatgtaaaagctggtcagtttgcc
tgtagcaaggatttaaaaataagtcttaaaaggaattgtaaaatgactatgctgtccagc
acttcatcagggaaaggtattgagactttgcttgctagtacatcatcaaatacaggcaaa
atgagccttaaaggaagcagtctatcatcagaaattcaaaattgcagatttgtattaaag
ggaaatctctggtcatgtgatgtgtcccatacaattccggaaacaaactctgccataatt
aacactaagaaaaaaattaaaagaccggtttcttcaagaagcattcaaacacgtcaaagc
aacacatacagttctttgaatggctgttcaaatagtcatgcaaataaaaaggagactcaa
agaggaaagagtagaattgacaaaatgtcaattgccaatgacaagaaatcagacgtgggt
aagacaggcaggagaaacacacaaggagctactggtcagtcattacagacaactagtcaa
aagatccaacaaaataaagtggcaggtccaagctctcagactggcttgataggacaaatt
tcaaccgttcatcctaaagaaagaagtatgaagaatactaataatttaaaacaattgcca
aggagtgtttctaaacaaaatggttataaagcaacccaaaaactccaaaaccagagtaat
gtacaagctttgacatcatttgctctgaaacccgattcttcaaataatgttaaacctgaa
gccaagaaaagtcgcattccaatttcattgtccatgaccagactatcccataccaaaaga
tctgtaaatcgtgaggaaatggttacacattctgccacagtacgcaggaaggtaaaggaa
gaaatgaccacctcgatatcgggacagccctcgaacacagaaaagtcgcctgggggtggt
gggatactaaaatcatatccgctgcggaaccgtctgcgcctaagcgacggtggtggaggc
ggtggtggaggtagcggcggtaataacccgcttactgctggacgcttagagcagcagggg
cagtcgcagtcattgccctcatcgccctcttcgcaaggcgttgccttcctggctgacacc
ttcagaagacttagagagtcacggagatcttcacaagaacagtctgcaaccagtaaaaga
aacaccccgcagaccaaagactcgagacagtcagcaggaacttggaaaagaacacacgga
accaaaaaatcgcctctttcttctaaacgtagcagtcgcagtaaaaccaacaacacgggg
tcgtgtgccagtagcagccagcactcgtctagagggtgcgggaaggtgagttttggcagc
ggtggctcaggcatgtctgggtcacatggtggccatgagggttcctccacatcatcaggc
cccccacaagcctcttcccatggtgcttgttccactacaggcactacaggaggcactagt
tcaactggagtacctccagccaccaccacggcctccgctgctctccatgtggcaccttct
acctcgactacttcgggtttgctgcctacagcatcattggctacacttggagccataggt
ggtggaagtagcagtggagcaagtggaggcctggctggcagcattggaggactcatgggt
gcaccaacagatagtgagagtgaggaaaatgaaatgggacgattagaaactttgttggca
tcgcgtggtcttcctcctagcctgtttggggcattagggcctcgcatgcaacacattttg
catcgctcggtttcttcctccattagttccaaggcacagcagctcttagttgggttgcag
gcaaatggtgaggaaagtgagcagcttcaagcagttatagagatgtgtcagttgttagta
atgggcaatgaagacacactggcaggcttccccatcaagcaagtcaccccagcactaatc
aacctgcttaatatggagcacaattttgatatgatgaatcatgcatgtcgagccttaacc
tacatgatggaggccctacctagatcatcagcggtggtggtggatgcagtaccggtgttt
ttagagaagctacaggtgatccagtgtatggatgttgcagagcagtcgctgactgctcta
gacatgctttctcgtaagcattcaaagtcaatattgcaggctcatggagtgtctgcttgc
ctaatgtacatagacttcttttcaactggagcccaacgtgcggctttaagcattactgcc
aactgctgtcagaacctcactgccgacgagttccattttatagcagattctcttcaactc
ctgtcatcaagattaactacacagggagataaaaagtgtgtggaaagtgtctgcttagca
tacagtcgactagtggattgtttccaaaatgaccccaaccgccttcaagagatagctggc
catggtcttctgtcaaacattcagcaactgctggttatgtccccacctgtattgaacagt
ggaacattcatcatggtaataagaatgctgtcctttatgtgcaacaactgtccagaactg
gctgtgcaacttttaaaaaacaacattgcacatacactgtgttaccttctcaccaattct
acagaacctccgggagaacaagtggaactagtatctcgcagtccacaagagttgtacgag
attacttgtttaattggtgaattgatgccaatgcttccctcggatggcatctttgctatt
gacggggctttgcaacgaccgtctagttgtcctcaggatgctgctctttggcagtggcaa
gatgctacgtggcaaaattattcaacaagtgattcaagaattatagaacattctcatcag
tcaggagaggatgaaataagcctatgtattcaaggtcgtgcatacaccatagattttcat
tcgatgcagcaaatcaacgataactccggcaccatgcggtctgttcaaaggcgcatgatg
cccgtaggcttaggtggaactgtgcttacagctacccaggcgacagatgctagagcgaag
tgcctgtgtgatgattctgagttggcatccaatctcatccgctcactctttagtttgctc
tatgaagtgtacagttcttctgcgggacctgctgtgcgatacaaatgcctaagagccctc
ttgaggatggtacagttctccagtccagatcttctacagcaggtgttgaagagccagagt
gtttcatctcatttggccactatgttatcatcacacgacttgaagatcattgttggagct
attcagatggcagagatcctcatgataaagttgccagagatatttgcaatttactttcgc
cgtgaaggagtgatgcatcaaataaaacgcttgtgtgacccagatgctaccttggtaaca
ccagcagctaaatggaatagcccggagctttccttagggtctggtcgtgttacaaatcca
agttctactagtcccttgctcactggccgtccattcaatggcaactgcttggactctacc
ccgtctcttcctacaccaccaaatcaggatgatgataaattgcagagcccatcacaacta
agactttacgatgtactgaagcgtaaacgcacagcccgtatgcgtactggaacctggaga
aaaagtagacaagatgattcaacgtcgtcatcgtcatctttcagcgaattcttcatgaag
aatgcaggcttggggggtcgagatacatggagagggatggctaatcgtacgaaacttgtg
acgggcaataacagtagcaattctacgagcaacagtagtggtggcggcgggagcggtggc
agtagtaagtcctctttcctcgctaactttaatccttcacgctggggaaggtgcaattct
gccacttcaactccttcacatgaatcacctgctggaaaggacaaattagttagtaacaat
ataagcagcagcggaagtagcagtaataataaggaagtagttcgtgtgtgggtgagggat
caagcacagagacttaaccagcagtacttcaccactgaattacaaggagcttcacatcct
gcccttagtgtattaaatagacttatagcagctattcagcaattagagcaagagccaaat
agtgctgtccaggccttaagggaaattagcaggattgtaacagaaagtgatataagtcca
tttgaagtgatccactctgggttggttcgttgtctattgacctacctcactgcctctgaa
aatacgactctgtccttaacgcacgacggagccttattgacagccattggtggggttagc
agtagctctgaaaatggaggccttacagccatctgcataagcacaccacgggacaccaga
ctcaggaatttccttcatgtcttccttggatgtacattgaatacactaagcttaggcact
gtggacacgagtcacattgcattattcagtgcactgataacgaagctcaatgggtgtgtc
aatcagttagagcagtttccagtgaaggtccacgacttgccaggcactgctctttcaggt
ttgggtagaggagggtccacatcagccataaagttcttcaacacacaccagctcaagtgc
aacttgcaacgtcacccagattgcacaagactaagacagtggcgtggaggaccagttaag
gttgatccattggcattggtgcaggccattgaacgttaccttgtaatcagaggctatggt
cgactcagggatgaagatgacgacaactctgatgatgataattcagatgaagacatagat
gatactttggctgctgtatcagttaaccagagttcttcaagtcataaacttcagtttgtg
ataaatgatcacatcttgccatacaacatgactgtctaccaagcaatcagacagttctcc
tcgccctccgatgccagtgcctccgaagcagacacagataccgaaactccaatatctcat
tctgctatatggctacaaactcacactatatattataggcctttacaagaggaggagcaa
agtcgaagttctggaggcagaaagggcaaagcagggggttccaaaaccagccccaagaag
aaagcagatacttttgttggagatggaagtattgttggagggaacaacagtgttcttgac
cagtacctgactgccaatcttcctgctagtgtgactgtcagtgacccaagtattgaagtg
ctggcactactacgggttctccatgcattgaacagacactatggctccctctatcccaca
gcatgttacccatcccctcttcctacagccgagttcacaaatctcaaattaacagctaaa
gctaatagacagttgcaagaccctttggttataatgactgggaatgttccaccatggttg
cctcaaatagcatatgtttgtccgttcctgtttccgtttgagacgcgccaactgctcttc
tatgcagtttccttcgaccgtgaccgagccttacaacgacttatggactcctctcctgag
ctcaattctgttgacagtagtgaaagagttaccccgagacttgaaaaacgaaagagaact
gtctctcgtgatgatattctcaaacaggcagagtctgtgataagtgatttggcttcttcg
agagccatgttagaaattcaatatgacaatgaagtggggacaggtttagggcccacgtta
gaattttatgcactagtttctaaagaactacagaaagcagatttagaactatggcgtggt
gaaacggttactgtggaagaaagaactgaagataatccaggaaaagcagtgaaatatgtt
aatgccagcaatggcctttatccattacctgtacccagaaacatgaaatctgctcacatg
acaaagttaagaacaaaattcagattccttgggaaatttatggcgaaggcagtcatggat
tccagaatgctggatttgggtcttcacgagtgtgtgtacaaatggttattgagtgaagaa
tggtccctaggattgggggacgtaactgcattagatctgacacttgggcatactctggac
aggcttcacgctacagtcttgcacaagaggcgcgttaccgcgcaagcagagcaggaagga
atctcgggaatagagcttcagactcgtctagatgctttaacagtagatggctgcagtgtg
gaagacctggcgctaacctttactctgcctggctaccctaatatagaatttcgaaagggg
ggctctgatatatcggtcaccattaataacctcgatcagtacctgcaactcgtgatagaa
tggctagtgcgggagggagtgagaagacaaatggaagcccttcgtgaaggatttgaatgc
gtgtttcctttgacacaactccacgtcttttatcctgaggagctcgagcaattgttctgc
ggttcctcggatgcatcacaatgggacatgaagcagctagcagagtgctgccggccagat
catggctatacgcacaattctcgagcagtcaagttcctgttgcaaattttgtcagaatat
acatctgctcaacagcgatctttcctacaatttgtcacgggttcaccccggcttcctgtt
ggaggttttagaagtctaactccagctctcacaattgtgaggaaaacgtttgaagctgga
gagaaccctgatgacttcttaccctctgtgatgacctgcgttaattacctgaaactacca
gactactccagtattgatattatgcgtgccaaattggagatcgcggccagagagggtcag
cacagcttccacctctcatag
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integrated database retrieval system
