Procambarus clarkii (red swamp crayfish): 123758105
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Entry
123758105 CDS
T07930
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin B-like
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla04120
Ubiquitin mediated proteolysis
pcla04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
123758105
04120 Ubiquitin mediated proteolysis
123758105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcla04121
]
123758105
Enzymes [BR:
pcla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123758105
Ubiquitin system [BR:
pcla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
123758105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_5
zf-RING_11
zf-RING-like
zf-ANAPC11
zinc_ribbon_16
Prok-RING_4
zf-Nse
Motif
Other DBs
NCBI-GeneID:
123758105
NCBI-ProteinID:
XP_045598249
LinkDB
All DBs
Position
LG03:complement(20139341..20193673)
Genome browser
AA seq
667 aa
AA seq
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MPAPMPVGGLTMASFALTAAVIGNAYYQKRQFYPSVVYITKSNPSMAAIYLLAFTLVILL
GKFLKKVFFGSLRAAEFEHLVERSFYAVTETCLAFTVFRDDFSPKFVALFTVLLFLKAFH
WLADYRVDFMERSPVITLLFHIRVISLLLLLSLLDLILVSHAYHSTITRGASVQLVFGFE
YAILLTVALNIAVKYVCHTVDLQSENPWENKAMYLLYTELCMGFFKVVLYAVFMIIMIRI
HTFPLFIIRPMYLTLRSFKRALNDVILSRRAIRNMNTLYPDATPEELTAVDNVCIICREE
MVTGAKKLPCGHIFHASCLRSWFQRQQTCPTCRMDILRQPQPPPPSQGVAPPQAPPTQPQ
TPPQIPQQPQPQAQQQIPNPFAGLFGGMPMPMGPPPVGLPPFPFPPVPMQQAQQQQSAST
SQTTSTTTTGTTESTSSTTTASGAAAAATAAAATSGGSSSQTGSTIPSSPFNMMPPFFPL
FPFNIPPPPPPLNFSAMTEEEVRQLEGNERKHVEARIQVLRNIQTLLDAAVVQMNQYAAV
VSSLDKTNQSHTSSNQSSDQTAAASDTVIPPQQPIQSSDQSDVHLSVTSSQFSFEENHSS
LASSEELPTSKPEVTSSSPSNEDSSQAELSSWLGASPATDTSTADPSDPEDPQEIRRRRL
EHFSHNS
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgccggcgcccatgcctgtagggggcctcaccatggcctcgtttgccctgacggcggcc
gtcatcggcaacgcctactaccagaagcggcagttctacccctctgtggtgtacatcacc
aagtctaaccctagcatggcggcaatctacctgcttgccttcacactggtaatcctcctt
ggaaaattcctcaaaaaggtcttctttggatctctaagagcagcagagtttgagcacctc
gtcgaacgatctttttatgctgttactgaaacctgcctggcattcactgtgttcagagat
gacttctctcccaagtttgtagcactttttactgtgctactatttctgaaagccttccat
tggcttgcagactacagagtggactttatggaacggtcaccagtaataacattgctcttc
cacatcagggttatatccttgcttcttcttctgagtctactagacttgatcctggtgagt
catgcctaccactccactatcactcggggtgcttcagtccagctggtgtttggctttgaa
tatgctattctcttgacggtggcactaaatattgctgtcaagtatgtttgccatacagtt
gacttacagtccgagaatccatgggagaacaaggcaatgtatcttctttatactgaactt
tgtatgggtttctttaaagtggtgctgtatgcagtgtttatgatcatcatgataagaatc
cacaccttcccactcttcatcatcagaccaatgtacttgacattaaggtctttcaagaga
gcactgaatgatgtgattctctctagacgtgctattcgaaatatgaacactttatatcca
gatgcaacgccagaggaactgacagctgttgacaatgtttgcattatctgcagggaagaa
atggttacaggtgctaagaaactgccatgtggccacatattccatgcatcatgcctgcga
tcgtggtttcaacgtcaacaaacatgcccaacgtgccgaatggatattttacgacagccc
cagcctcccccaccgagtcaaggtgttgctccgccacaagctcctccaacacagccgcag
actcctccacagatcccacaacagcctcaacctcaagctcagcaacagatacccaatcct
tttgctggtttgtttggtggcatgcccatgccaatgggtccaccacctgtgggtcttcct
ccatttccatttccacctgtgcccatgcagcaagctcaacagcagcagtctgcctccact
tcacagacaacatccactactacaactggaaccacagaatctacctcctccacaactact
gcatctggggcagcagcagcagccacagcagcagctgcaacatcaggtggcagcagtagc
cagacaggaagcacaataccatcgtcaccattcaacatgatgccaccatttttcccactc
tttcccttcaatattcctccaccaccgcctccattaaacttctcagcaatgacagaagag
gaggtccgacaactggaaggcaacgaaagaaaacatgtcgaggccagaatacaagtatta
agaaacattcaaacattacttgatgctgccgttgttcagatgaaccagtatgcagctgtt
gtgtcatcacttgataaaaccaatcagagccacacaagttctaatcagagctctgatcag
acagctgcagcatcagataccgtgatacctccacaacaacctatacagtcatcagatcag
tcagatgttcacctgtctgttacctcatcacagttttcctttgaggaaaatcattcatct
cttgccagtagtgaagagcttccaacatccaaacccgaagttacttcatcatcacccagc
aatgaggacagcagtcaagcagagttgtcgtcatggttaggtgcaagccctgccaccgac
acatctactgccgacccatcagacccagaggatccacaagagatcaggcggcgacggcta
gaacacttctcacacaactcctag
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