Procambarus clarkii (red swamp crayfish): 123758320
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Entry
123758320 CDS
T07930
Symbol
Cals
Name
(RefSeq) calsyntenin-1
KO
K22659
calsyntenin 1
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pcla04515
]
123758320 (Cals)
Cell adhesion molecules [BR:
pcla04515
]
Cadherins
Cadherin related
123758320 (Cals)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Laminin_G_2
Laminin_G_3
Glyco_hydro_16
Motif
Other DBs
NCBI-GeneID:
123758320
NCBI-ProteinID:
XP_069178711
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Position
11:37221546..37254781
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AA seq
747 aa
AA seq
DB search
MKRSQPVMVTVKVNRVCHLGWKGIPDQVEYSPGSGRLELFPSSSLELCNVPCHVERVQAR
IGLTTNHIGKGCDRDTYSVAAQRKMCGASSDSIELLPAPGAGKDWTAGLHSDEGHEGDLI
YEFEGDSSGAIVPESVLDHNLTNIFTISTWLKHKSHPNMDKHTKEHVLCNADDHKMNRHH
TALFVRNCRLILLLRRESTEANLNTFQPAEWRWKLPQVCDNEWHHYSVHVKFPEVTLYVD
GHIFRPENGESPEVIDDWPLHPTRGINTTMTVGACWQGSESNMKHGLTGYLAGLSVLVGA
LESPRVLSCLTRCQEALDTPAMELLQPSMELLTNNEMTQITIEGNNVTNLETLVRRVAYV
NGRDFPTPGRRPISLTTNILCDSGKALKVATAQSFVVVMQPHQPSIELNGTTNFAEEYES
FRQGLRVFPDVGVYLSAAAEEATAPTPGGQLDECVVSVYPPLNPDHETLVLPDNLISELG
LVSSITRQGATISGTHTTHHYQSILRQIHYANRKPAYYLNRAFKLSCSELGGRFTSNEYV
QTVTVIHPQLSVDRNSGLVGSIGPLSNTIPENPHPGLHTHNQGVENGGPLTHHNPPPVPA
HAKIAAHHVELKPAHTVNDVYFTSNVMEGVAVNSAGHAVTIIIVVCVGFLVFMVVLGVIR
VRAAHTRHAHEDVADAEMAWDDSSLNITVNPMEQQLELAETQRLRDDDDDDDDSSDDGSN
FNDDLDSSDEDEGKPKELEWDDSTLKI
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgctctcaaccagtcatggtgacagtaaaggtcaatcgtgtgtgccatctgggt
tggaaaggaattccagatcaggtggaatattctcctggatctggtcggctggaactattc
ccatcctcatcactcgagttgtgcaatgttccgtgccatgtggagcgagtccaggctcgc
attggcctcaccaccaaccacattggtaaaggctgcgaccgagacacgtattcagtggcg
gcacaaaggaagatgtgtggagcaagctctgacagcattgagcttctcccagcccctgga
gctggcaaagactggactgctggcttgcattccgacgagggccacgagggggacctcatt
tatgagtttgaaggcgactcctccggagcaattgtacccgagtctgtccttgatcacaat
ctaaccaacatcttcaccatctccacttggctgaaacacaagtcacatccaaatatggac
aagcacacaaaggaacatgttctgtgcaatgctgatgatcacaagatgaaccgccaccac
acagccctgtttgtacgcaactgtcgtcttattctcttgctgcgtcgcgagtccaccgag
gctaacctcaacaccttccaaccagcagagtggcggtggaagcttcctcaggtgtgtgac
aacgagtggcatcattactctgttcatgtcaagttccctgaagtcaccctgtatgttgat
ggacatattttccgaccagagaatggagagtcgcctgaggtgatagacgactggcctcta
catccaacacgaggcatcaacaccaccatgactgttggagcatgttggcaaggatctgag
agtaacatgaagcatgggttgacgggttacctagctggattgtcagtactagtgggtgct
ctggaatcaccacgcgttctgtcttgcctcacgcgctgtcaagaagcccttgatactcca
gccatggaattgctgcaacccagtatggaacttctcaccaacaatgaaatgacacagatc
acgattgaaggcaataatgttaccaacttggagacccttgtccggcgtgtggcttacgtt
aatggcagagacttccccacaccaggacgccgaccaatctcgctcaccaccaacattttg
tgtgattctggtaaggcactgaaggttgcaactgctcagagctttgtggtagtgatgcag
ccgcaccagccaagtattgagctcaatggcactacaaactttgccgaggaatacgaatca
ttccgccagggacttcgtgttttccccgatgttggagtatacttgtcagcagctgccgaa
gaagccactgctcccaccccggggggacaactggatgagtgtgtagtgtccgtctaccca
cctctcaaccctgatcatgaaactttagtcctcccagacaacctcatttcagagctagga
ttagtgtcatccatcaccaggcagggagcaacaatttcaggaactcacacaacacatcac
taccagtctatccttcgtcagattcactacgcaaatcgcaagcctgcatattacctcaac
cgtgctttcaaactatcctgctctgagctgggaggcagatttaccagcaatgaatatgtc
cagacggtgacagtgatccacccacagttaagcgtggataggaattcgggtctagttggt
agtatcggccctctgtccaacaccattcctgagaatcctcaccctggcttacacactcat
aatcagggagtagaaaatggtggaccccttacccatcataacccaccacctgtaccagct
catgcaaagatcgctgctcaccatgtcgaacttaaacccgcccatactgtcaatgacgtc
tactttacctcaaatgttatggaaggagtggcagtcaacagtgctggacatgcagtgacc
atcattattgttgtgtgtgttggcttcttggtattcatggtggtgctgggtgtgattcgt
gtccgtgccgcccacacgcgtcacgctcacgaggacgtggctgacgcagagatggcctgg
gatgattcatccttgaacatcaccgttaaccctatggagcaacaactagaactggcagag
acacagcgcctgagggacgacgatgacgacgatgatgactcgtctgatgatggcagtaac
ttcaatgatgacttggattcttcggatgaagatgaaggaaaacccaaagaacttgagtgg
gatgattccaccctcaagatataa
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