Procambarus clarkii (red swamp crayfish): 123758663
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Entry
123758663 CDS
T07930
Name
(RefSeq) pre-piRNA 3'-exonuclease trimmer
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123758663
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcla03019
]
123758663
Enzymes [BR:
pcla01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
123758663
Messenger RNA biogenesis [BR:
pcla03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
123758663
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
123758663
NCBI-ProteinID:
XP_045599149
LinkDB
All DBs
Position
31:complement(14860143..14886373)
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AA seq
540 aa
AA seq
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MVEVTTNNFNQLLPGILSDIKSSSFVALDTEFTGLLADAAFKGSLFDDGPKRYQKLVSNI
RRFTICQLGLAIFKGVPDANAYTVTSYNFYLRPHSCISFDPTFLCQTSSIEFLQKYKFDF
NKWLYSGIGCMNSDEMEQLRSELFSLVRGSQAFRIPYSVQDQLSIIGEWGAKANEGETTI
PSDDIDVTSQVILVVSIRSRFPDLWAALDNRQVIIQKVSALERARLEAQDPEGKEFVETV
VRSMLGFTSVFRCLADHQKPLVLHNCLLDLMLIYKQLHQNLPTSYDMFKSNLHKMFPIIY
DTKFIASELKILYREKDEKVRNLINNTGLVELHSSLKREMPVLYQPSLKHCPPDNKYSGN
ETLPHEAGYDAFLTGGCFLTMAHVHAMLQMSSLSQQRPMSPREHVYALKSLANCVQIQRA
AIPYMELAGQDPKSKRPPWLLVEGRTRSALVTPGSVSIALAQYGHLDVVPRNANSVLVAT
SSWLCTRDIFTNLAKDSHLKVKFYNRLRHSPFVRTLAWSGALISTGLSAWIVYSTLKKPS
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggtagaagtaacaacaaacaactttaaccaacttcttcctggcattttgtctgacata
aagtcgtcttcatttgttgcactagatacagagtttacgggacttcttgcagatgctgcc
ttcaagggaagtttgtttgatgatgggccgaagagataccagaagctggtatccaacatt
cgaaggtttacaatatgccagcttggtttggcaatctttaagggtgttcctgatgccaat
gcatacaccgtgacaagctataacttttaccttcgaccgcattcttgcatctcttttgat
cccacatttttgtgccagacatcaagtatagaatttctacagaaatacaagtttgatttc
aataagtggctgtattctggcattgggtgcatgaactcggatgaaatggagcaacttcga
agtgaattattctccctcgtgagaggaagtcaagccttcaggattccctattcggtgcag
gaccagctaagcattataggagagtggggagcaaaagctaatgagggggagacgactatc
ccctctgatgacattgatgttacctcccaggtgatacttgtggtcagcatacgaagcagg
tttccagatctctgggctgcattggacaatagacaggttatcattcagaaagtgtcggct
ttggagcgtgcaagacttgaggcgcaggatcctgaaggcaaagagtttgtagaaactgtt
gtaagaagtatgttgggctttacgagtgtgttccgctgtttagcagatcaccagaagccc
ctcgtccttcacaactgccttttagatcttatgctgatatacaagcagttacatcaaaac
ctaccaacatcatatgacatgtttaagtccaacttgcacaagatgtttcctatcatctat
gacacaaagttcatcgcttcagagctgaaaattttgtatagagaaaaggatgaaaaagtg
aggaacttgattaataatacggggctggttgagctacattcatctctgaagagggagatg
ccagttttataccaaccctcactcaaacactgcccgcctgacaacaagtatagtggaaac
gagacactgccccacgaagcaggctatgatgctttcctcaccggtgggtgttttctcact
atggcccacgttcatgccatgctccaaatgtcatcgttgtcacagcaacgccccatgagc
ccacgagaacatgtttacgctcttaagagcttagcaaattgtgtgcagattcaaagggca
gcaattccttatatggagttggctggccaagatccgaaatctaagcgacctccctggtta
ctagtggagggccgcaccaggtcggcattggtgactcctggcagtgtgtcgatagcactg
gcacagtacggacatcttgatgttgtacctcgtaacgccaactctgtcctggttgctacg
tcttcatggttgtgcacaagagacatctttacaaacctggcaaaggacagccacttgaaa
gttaaattctacaatagacttcggcattctccatttgtgaggacccttgcctggtctggg
gccttgatatccactggacttagtgcatggattgtatattctacacttaaaaaaccttcc
tag
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