Procambarus clarkii (red swamp crayfish): 123758667
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Entry
123758667 CDS
T07930
Symbol
tex
Name
(RefSeq) THO complex subunit 3
KO
K12880
THO complex subunit 3
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla03013
Nucleocytoplasmic transport
pcla03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123758667 (tex)
09122 Translation
03013 Nucleocytoplasmic transport
123758667 (tex)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcla03019
]
123758667 (tex)
03041 Spliceosome [BR:
pcla03041
]
123758667 (tex)
Messenger RNA biogenesis [BR:
pcla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
123758667 (tex)
Spliceosome [BR:
pcla03041
]
Complex C
Other components
EJC/TREX
123758667 (tex)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
123758667 (tex)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40_CDC20-Fz
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
ANAPC4_WD40
WDR55
EIF3I
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_Aladin
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
eIF2A
Beta-prop_NOL10_N
DSE1_N
Beta-prop_IFT140_1st
RMC1_N
Beta-prop_Vps41
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_WDR35_TULP_N
Tricorn_2nd
NBCH_WD40
PAC11
Beta-prop_EIPR1
Beta-prop_HPS5
PROPPIN
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
CFAP251_N
TRM82_WD
ASA1
Beta-prop_WDR11_1st
Peptidase_S9_N
WD40_RFWD3
PD40
KNTC1_N
Beta-prop_ELP1_1st
Beta-prop_NUP159_NUP214
Beta-prop_SCAP
DPPIV_N
Cytochrom_D1
Beta-prop_Nup120_160
WD_LRWD1
Motif
Other DBs
NCBI-GeneID:
123758667
NCBI-ProteinID:
XP_045599156
LinkDB
All DBs
Position
31:complement(14766611..14786433)
Genome browser
AA seq
325 aa
AA seq
DB search
MVSYLEEMKTYFHSHNKQKEYVGHNSKVHTIGWNADGRRLASGSYDKCVTIFVFDGHRET
LRKDYTYKGHGDSVDQLCWHPTHSEQLTSASGDKTVRIWDTRTHKCSATINTKGENINIT
WSPDGHTIAVGNKEDLVSFIDVRSQKIRHEQQFKFEVNELSWNNANDLFYLTNAQSGQGY
IHIYNYPEMELVHSIHAHPGNCICIKFEPHGQYFATGSADALVSIWDAQELYCRMTLSRL
EWPVRTLSFSHDGQLLASGSEDQTIDIAHVATGEQVAHISVAYPTFTLAWHPRHFLLAYA
CDDKDDRERDRDAGTVKLWGLGERS
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggtgagttacttggaggaaatgaagacttacttccactcgcacaacaagcagaaggag
tacgtggggcataacagcaaggttcacactatcggctggaacgctgacggtcgccgtctg
gcctcggggtcctacgacaagtgtgtcaccatctttgtgttcgacggccatcgcgagaca
ctgagaaaggattacacatacaaaggtcatggagacagcgttgatcagttatgctggcat
ccaacacactcggagcaactcacctctgccagtggggacaagacagtgaggatatgggac
acacgcacacataaatgctcggcaaccatcaatacaaagggtgagaacatcaacatcacg
tggtccccggatggccataccattgctgttggtaacaaggaggatcttgtgtcgtttatt
gatgtgcgcagccagaaaattcgtcatgagcaacagttcaaatttgaagttaatgaattg
tcatggaataatgccaatgacttgttttaccttaccaatgcacaaagtggccaaggatac
atacatatctacaattatccagagatggagctggttcactccattcacgcacatcctggt
aactgtatttgcatcaagttcgagccccatggacagtactttgccacaggctcggctgat
gccctcgtctccatctgggatgcacaggaactgtactgcaggatgactttatccagatta
gaatggccagttcgcaccctcagtttttctcatgatggacagctgttagcgtcgggtagt
gaggatcagacgatcgacattgcccacgtggctacaggagagcaagtggctcacatcagt
gttgcctacccgaccttcacactagcatggcacccaaggcattttcttctggcatacgct
tgtgatgacaaagatgatcgagaacgagatcgtgatgccgggaccgtcaaactctggggt
cttggtgagcgaagttga
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