Procambarus clarkii (red swamp crayfish): 123758735
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Entry
123758735 CDS
T07930
Name
(RefSeq) fizzy-related protein homolog isoform X1
KO
K03364
cell division cycle 20-like protein 1, cofactor of APC complex
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
123758735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcla04121
]
123758735
Ubiquitin system [BR:
pcla04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
123758735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_WDR5
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_WDR19_1st
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_Aladin
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
WDR55
Beta-prop_RIG_2nd
Beta-prop_HPS5
Tricorn_2nd
WDR90_beta-prop_4th
Beta-prop_RIG_1st
NBCH_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_IFT122_1st
Beta-prop_WDR41
Beta-prop_Vps41
Beta-prop_EIPR1
Beta-prop_SPT8
Beta-prop_VPS8
Beta-prop_SCAP
ELYS-bb
Ge1_WD40
Beta-prop_IFT80_2nd
Motif
Other DBs
NCBI-GeneID:
123758735
NCBI-ProteinID:
XP_045599315
LinkDB
All DBs
Position
31:complement(23136165..23157136)
Genome browser
AA seq
485 aa
AA seq
DB search
MDREYERRLLRQQNGPVNSPASPLSPRRQLTHISVQSPSKDRTGDRFIPTRAGANWDVNF
ALIQENNKVNNEVRKGREGGEGKDGVAYTTLLRNELLGTNIEDLRDTPDERRALSPVQNP
NLYHFSPRKNHQREDTLSPYSLSPVSAKSQKLLRSPRKAARKISKIPFKVLDAPELQDDF
YLNLVDWSSQNVLSVGLGHCVYLWSAYTSQVTRLCDLSLDGDSVTSVSWSERGNQVAVGT
HKGLVQVWDVASSKRVCILNGHTARVGALAWNGDVLSSGSRDRLILQRDVRTPCIIPDRR
LAGHRQEVCGLKWSPDSQYLASGGNDNKLFVWNLHSLTAVQTYTEHNAAVKAIAWSPHHH
GLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHASELVSTHGYSQNQILVW
RYPSLAQVAKLTGHTYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKARSQKESKSVLNL
FTSLR
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggatcgtgaatatgagagacgtttattgcgccaacaaaatggcccggttaattcacct
gcatctcctttatcgccccgtcgtcagttaactcatatatctgtccagtcaccaagtaaa
gaccgcacaggtgatagatttattcccactcgcgctggtgccaattgggatgttaatttt
gctcttattcaagaaaacaacaaagtaaataatgaagtgcgtaaaggtcgtgaaggggga
gaaggcaaagatggggttgcgtacaccacacttcttcgtaatgaactccttggtacaaac
attgaggatctaagagacaccccagacgaaagacgagctctctcgcctgttcagaatcct
aacctttatcatttttcaccacgcaaaaatcatcaaagagaggatactttgtcgccatat
tccttgtctcctgtaagtgccaagagccaaaagttgttgcgatctccaagaaaagctgct
cggaagatatccaaaattccctttaaggttttagatgcaccagagctccaagatgacttt
tatctcaacttggttgactggagttcccagaatgttttatctgtgggccttgggcactgt
gtttatctgtggtcagcatatacgtcacaagttacccgactgtgtgatctttccttggat
ggtgactcagtaacgtcagtctcgtggtctgaaagaggtaatcaagttgcagttggaact
cacaagggtcttgtgcaagtttgggatgttgcaagcagtaaaagagtgtgtattttaaat
ggacatactgcacgtgtaggggctttagcttggaacggtgacgttctctcatctggatca
agagatagattaattttacaaagagatgtaaggactccatgcatcatcccagatagacgg
ttggcagggcatagacaagaggtgtgtggtttaaaatggtctccagatagtcagtatttg
gcatctggtggtaatgacaataagctctttgtgtggaatctgcactcactgacggccgtc
cagacgtacacagaacacaatgctgcagttaaagctattgcctggtcaccacatcatcat
gggttacttgccagtggaggagggacagccgatcgctgcatacgtttttggaatacatta
actggacagccaatgcagtgtgtggacactggttcacaagtttgtaacttggcatggtcc
aaacatgcttcagaactggtctctacccatggttatagccagaaccagattttagtttgg
cggtacccatcactagcacaagtggccaagctgactggccatacttatcgtgtcctatac
ttggcaatgtcacctgatggggaggctattgttactggtgctggagacgaaactttgcgg
ttttggaatgtttttagtaaagctcgatctcaaaaggagtccaaatcggtattgaatctt
ttcacttctttgcgataa
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