Procambarus clarkii (red swamp crayfish): 123759016
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Entry
123759016 CDS
T07930
Symbol
Shmt
Name
(RefSeq) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla00260
Glycine, serine and threonine metabolism
pcla00630
Glyoxylate and dicarboxylate metabolism
pcla00670
One carbon pool by folate
pcla01100
Metabolic pathways
pcla01200
Carbon metabolism
pcla01230
Biosynthesis of amino acids
pcla01240
Biosynthesis of cofactors
pcla04981
Folate transport and metabolism
Module
pcla_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
123759016 (Shmt)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
123759016 (Shmt)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
123759016 (Shmt)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
123759016 (Shmt)
Enzymes [BR:
pcla01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
123759016 (Shmt)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Motif
Other DBs
NCBI-GeneID:
123759016
NCBI-ProteinID:
XP_045599694
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Position
15:1128032..1135939
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AA seq
473 aa
AA seq
DB search
MSGSVSNGEGADYPLSKPLSEDDPQLYEILKKEKRRQFRGLEMIASENFTSRAVNDCLSS
CLTNKYSEGMVGQRYYGGNEFIDEVEVLCQQRALKTFGLKPEEWGVNVQPYSGSPANFAV
YTALVEPHGRIMGLDLPDGGHLTHGFYTATKKVSATSIFFESMPYKINLQTELIDYDRLQ
ENAKLFKPKLIIAGVSCYPRHLDYKRFREICDENGSLLMADMSHVSGLVATGLTTNPFEY
CDVVTTTTHKTLRGPRSGVIFYRRGQKGVDKNGKPIMYGYEDKINQAVFPGLQGGPHNHQ
IAAIAVTMRQAAEPSFKDYQEQVIKNSKELAKGLQTAGYKIVTGGTDNHLVWVDMRSVGL
SGGKAEKILEDVSIACNKNTVPGDKSALNPSGIRLGTPALTTRGMKEDDIKMVVLFMDEA
FKIAKDVQAKSGPKLVDFKRVLDDEDFKTRVGALREKVEAYAVKFPIPGLPDI
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgagtggaagtgtgagcaatggcgagggggcggactaccccttgagcaagcccttatcc
gaagatgatcctcaactttatgaaattctcaagaaagaaaagaggcggcagtttcgtggg
cttgaaatgattgcttcggaaaatttcacatctcgtgcggtaaatgattgcttgtcatct
tgcctcactaacaagtactccgagggcatggttggccagagatattatggtggaaacgag
ttcatagatgaggtggaagtgctgtgtcagcagagggccctcaagacgtttgggctgaag
cctgaagaatggggtgtcaatgttcaaccatactctggttctcctgccaactttgccgtc
tacactgctctagttgaacctcatggacgtattatggggttggatcttcctgatggtggt
catctcacacatggtttctacacagccaccaaaaaagtgtcagctacgtcaatattcttt
gaatcgatgccctacaagatcaacttgcagacagagcttattgactatgacagactacaa
gagaatgctaaacttttcaagcctaagctcataattgcaggtgtcagttgttatcctcgt
cacctggattacaaaaggttccgggagatctgtgacgagaatggttccctcttgatggcc
gacatgtcgcacgtaagtggccttgtagccacaggcctaactacaaacccctttgaatac
tgtgatgtagtcactacaactacgcacaagacacttcgtggacctcgaagtggagttatc
ttctatagaagaggccagaaaggtgtggacaaaaatggaaaaccaataatgtatggctac
gaggacaagatcaatcaggcagtgttcccgggccttcaaggaggaccccataatcatcag
attgcagctattgctgttacaatgagacaagctgctgaaccttcgtttaaagattaccag
gaacaggtaataaagaattccaaagagcttgccaaaggcttgcagactgctggctacaag
attgttacaggaggaactgacaaccatttagtgtgggtggatatgcggtctgtggggcta
tcaggaggcaaagctgaaaaaattttggaagatgtatccatagcatgcaacaagaacacg
gttcccggtgacaaatctgcattgaacccaagtggcattcgtttgggaactcctgctctc
accacaaggggcatgaaggaagatgacataaagatggttgtgttattcatggatgaagcc
ttcaagattgcaaaagatgtacaagcaaaatctggacccaagttggtggatttcaagcgt
gtcctggatgatgaggatttcaagacacgtgtgggtgctctcagggagaaggtagaagct
tatgcggttaaattcccaataccaggattaccagacatttaa
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