Procambarus clarkii (red swamp crayfish): 123759332
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Entry
123759332 CDS
T07930
Symbol
Tfb1
Name
(RefSeq) general transcription factor IIH subunit 1 isoform X2
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla03022
Basal transcription factors
pcla03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
123759332 (Tfb1)
09124 Replication and repair
03420 Nucleotide excision repair
123759332 (Tfb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcla03021
]
123759332 (Tfb1)
03400 DNA repair and recombination proteins [BR:
pcla03400
]
123759332 (Tfb1)
Transcription machinery [BR:
pcla03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
123759332 (Tfb1)
DNA repair and recombination proteins [BR:
pcla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
123759332 (Tfb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_TFIIH
BSD
Motif
Other DBs
NCBI-GeneID:
123759332
NCBI-ProteinID:
XP_045600192
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All DBs
Position
22:47910978..47946505
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AA seq
545 aa
AA seq
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MSGEREDILLQVNHVRYKKNNGQLYLSQTRVGWMMDESDTFAVSVQYNDIRTQKISPEGK
PKVQLQLVLHDISSFTFHFCTPEGGEKQLAERNQVKERLSQLMTQNRRQPPDELMEKKRM
LDENEQLQQLYRALVPTSIISVDEFWKEIAGQYKQNMGPQQDVGVSGAFLADIKPHTDGN
NGKVQYNLTPEIMTAVFKTYPAVKKKHGEYVPHRMSEAEFWTLFFQSHYYSVHTTSRIEN
VFSECSKYDDKEWNRDVSSTQNDPLFDLNDIYEEKPMSIEGDLRVAGVKAGSNVFHALMI
KRFNQHSLNIIKSQTHSEKEKVLDELAAKNPNGIPNGEEKQDTEVHKSKKARLTEKIVYD
DLEDSNKVETSSLTIHQRDRYLTGPTEYSTIQSLQPRQVCVLQEQLTEHVNSWCPNLHIS
QDPDAAYQSLQRFSEMCRKGRSSVGVRTGDQLPGNLHKELGQVYSSAGELLRHFWSCFPP
RTPQLQEKLHKMHETLCRYHNVTIRPFQEMAVNDYNCNSSILDHLIEMFHIANTKFENWK
ARNTR
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgagcggagaacgggaagatatccttcttcaggtgaaccatgttcgctataagaagaat
aatggccagttgtatctttctcaaacgcgagtcggctggatgatggatgaatcggacaca
tttgctgtgagcgtccagtacaatgacatcagaactcaaaaaatctcgccagagggaaag
cctaaagtacaactccaacttgttctccatgatatttcctcgttcacattccacttctgc
acaccagagggaggagaaaaacagttggctgagaggaaccaggtcaaggaacggcttagt
cagctgatgacccaaaacagacgtcaaccacccgatgaattgatggaaaagaaaagaatg
ctagatgagaatgagcaactgcagcaactgtaccgtgctctggtgcccacatctatcatc
tctgtggatgaattttggaaagaaattgctggccaatacaaacaaaatatgggaccacaa
caagatgtgggggtgtctggggcgtttctggcggacataaagccacacactgatggcaac
aatggaaaagttcagtacaacctgacgccagagattatgactgccgtttttaagacatac
ccagctgtgaagaagaaacacggggagtacgttccccacaggatgtctgaggcagagttc
tggacgctgtttttccaatctcattattatagtgtacacacaaccagccgcattgaaaat
gtcttttccgagtgttcaaaatatgatgacaaagaatggaatcgtgatgtgagctcgact
cagaatgatccgttgtttgatctgaatgacatctacgaggagaagcctatgtctattgag
ggtgacctgagagttgctggtgtcaaagctggaagtaatgtctttcatgctttaatgatc
aaaagattcaaccaacacagtctcaacatcatcaaatcacaaacacattctgaaaaggag
aaagtactggatgaattagcggcaaaaaacccaaatggaattcccaatggtgaagagaag
caggatactgaagtacacaagtctaaaaaggctagattaacggagaaaatagtttacgat
gatctagaggactcaaacaaggtggaaacgtcgtcattaaccatccaccaaagagatcgc
tacctcacagggcccacagaatacagtaccatccagagcttacagccccgccaggtgtgt
gtcttacaggagcagctaacagagcacgtcaactcttggtgtccaaacttacacatcagc
caagatccagatgctgcgtaccagtctttacagcgcttcagtgaaatgtgtcgtaaagga
agatctagcgtgggggttcgtacaggagatcaattaccaggcaatttgcataaagaattg
ggtcaggtgtatagcagtgctggtgaactgttgcgtcacttctggtcgtgcttccctccc
agaactccgcagttacaggagaaactccacaagatgcacgagacactctgtcgataccac
aacgttactataagaccattccaggaaatggcagtaaacgattataactgcaatagtagt
attttagaccaccttatagaaatgtttcacatcgctaatactaagtttgaaaactggaag
gcgcgaaacaccaggtga
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