Procambarus clarkii (red swamp crayfish): 123759354
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Entry
123759354 CDS
T07930
Name
(RefSeq) probable ribonuclease ZC3H12C isoform X1
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcla03019
]
123759354
Messenger RNA biogenesis [BR:
pcla03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
123759354
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
UBA_N4BP1_C
zf-CCCH
zf-CCCH_4
zf-CCCH_2
zf_CCCH_4
Motif
Other DBs
NCBI-GeneID:
123759354
NCBI-ProteinID:
XP_045600247
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All DBs
Position
32:complement(31312532..31489815)
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AA seq
1198 aa
AA seq
DB search
MVCEDNNTVSSVVVGGVYPDLAGVGSVSRWWAPLHAPPCSLLLPHHNTMTIVSPYSSDVV
PVVVGERGVVGGCLLTAMSGVDAPPVAAPSPPPSPPHTAHPPTDKHHHDSSIGSEDVSGV
VGRGRRKLENEDSSYDSDFEPCERPDDDEHEDVCRTVSDTLCAEYAEYVTMHSPPTTSTS
TATTSTTTIVPTTHILATSLTAASSTTAAVITVTSTTAAVTTTAVTTPTATTAPVTTATT
VSVTTTTAVTTSTSTPSSGCEGKTIQDAVRAASPAVRVSSAPSVSVTPPAPATTIMTIAQ
PLPSPSTAAKAGTVTTVTTTSSVHEPLAPVCSTSEEQTSSTTTGGVSCVVLRPSYASQVE
FGVKLGYSEALVQMALVKLGGTPDKDELLAELIRLVSSVPRADGEGDSADDVTDTKDDVE
HHHHHLQQQHQQPSLKPIIIDGSNVAMSHGNKTTFSCSGLRVCVDWFRARGHTEITVFVP
SWRKEAPRWDTPIVDQDVLLELERERILVFTPSRVCGGKRIVSYDDRYILKEAVTSGGVV
VSNDNYRDLAAESQAFRRVIEESLLMYSWVNGRFVPPDDPLGRSGPTLDVFLRRSTRDKQ
ALCPYGRKCTYGNKCKYMHPERGTAPLKSVTERLQEQVQKHYQNKAKSRDSSPGEGLRLK
SLSLPVGIAESDVTKKPLARTQSIVPSVSLTLPSALTQETPTHDLGPSTSSASSHSHHHL
MPPHMDTRPLDPLRSSTMFKSDSSLYHIYSSQSTQPSYGASTWWKDQGNELPMRAMTSQQ
GAPPQSPSQMYGSHLSLTKQMSDPDPAASDNPHRKLQRQLTLNPAYDSRLYKIVGFREPA
PEHFPLASSGQQQQQTTGQGSPSRTMNRDNEALAFSQVASGMTGRVSPGYSSPYGSREQL
PAGMHPPLARHSSQESAKHMVSLPPHLYPTYSHPHVTRFASAPDPIWGGHQQQASPGPPQ
ITRLNSTSDTRLNVYSSSDSHFFPDVFEEQLGRLPQFQTLGPPHSVSPGPSAPSPGPIGS
RPMSPQQGPVHHHSPSVSPRQQPVGFSSNFSNPTSHEDARLHVFYHLSNLFPEAQVRAVL
AMYPEETDPQKICSYILSCNPGPVGSRPMSPQQLSQSGVGHQSQGAPVCGSSPLSAGFSS
SLPTAASSHEDARLRIFYNLSQLFPVAQVRAVLARYPEETDAKQLCATLLSHLSGNQS
NT seq
3597 nt
NT seq
+upstream
nt +downstream
nt
atggtgtgcgaggataacaacactgtgagcagtgtggtggtgggaggtgtgtacccggat
ctggcgggtgtgggcagtgtatcgcggtggtgggcacccctgcacgctccgccatgctcc
ctcctcctgcctcaccataacaccatgaccattgtatcaccgtattcctcggatgtggtg
cccgtggtggtgggtgagcgcggggtagtgggcgggtgcctgctgaccgctatgtccggg
gtggacgcaccaccagtggccgccccttcaccgccgccctcgccaccccacaccgcccac
ccgcccaccgacaagcatcaccatgactccagcattggtagcgaagacgtgtcgggggtg
gtgggccgcggccgacggaagctggagaacgaggacagcagctatgacagtgacttcgag
ccctgcgagcgccctgacgatgacgagcacgaggatgtgtgccgaaccgtctccgacacg
ctgtgtgccgagtacgcagagtacgtcaccatgcatagtccgcccaccacctccacctcc
actgcgaccaccagtactactaccatcgtccctaccactcacatcctcgctaccagtctt
acagcagcctcctccactacagccgcagtcattacagtcacgtcaactacagccgcagtc
acgacaaccgcagtcaccacacccacagcaactacagccccagtcaccacagcaactaca
gtttctgtcacgacaaccacagcagttacaacttcgacaagcacgccatcttcaggttgt
gaaggcaagacaatccaggacgccgtgagagcagcgtctcccgcggtgcgggtatcttcg
gcaccgtcagtgtccgtgacgccgcctgcccccgccacaaccataatgacgatagcacaa
cctctcccctcgcccagtaccgctgccaaggctgggacggtgacgacggtgaccaccacc
agcagcgtgcacgagcctctagcaccagtgtgcagtacgtcggaggagcagacgtcgtca
acgacgacgggaggcgtgtcgtgtgtggtgctgcgtcccagctacgcctcccaggtagag
ttcggcgtcaaactgggatattcggaggcgctggtgcagatggccctcgtgaaattggga
ggaacgccagataaagacgagcttctagcggagctcatccgtttagtttccagcgtgccc
cgagccgacggagaaggggactctgctgacgacgtgacggacacaaaggatgacgtggag
catcatcatcaccacctgcagcaacagcatcagcagccatctctcaaacccattattatc
gacggcagcaacgtggccatgagtcatggaaacaagacgacgttctcgtgcagcggcctg
cgcgtgtgtgtggactggttccgtgcccgcggacacaccgagatcaccgtcttcgtgccc
tcctggaggaaggaggcgcctcggtgggacacacccatcgtggatcaagatgttctactg
gaactcgagcgagaacgtatcttggtgtttacgccttccagggtatgtggcggcaaacgc
attgtctcctacgatgaccgctacatcctcaaagaggctgtgacttccggcggtgttgtc
gtcagcaacgacaactatcgtgatctggctgcagaatcccaggccttccgacgggtaata
gaagagagtttactcatgtactcttgggtcaatggtcgcttcgtacctcctgatgaccct
ctaggaagaagtggacccacactagatgtcttcctacgacgaagtactcgagacaaacaa
gcactatgtccatatggtcgtaaatgtacttatggtaacaaatgcaaatatatgcaccca
gagcgaggcactgcaccattgaagtctgtgacagaacgactgcaagaacaagtacagaag
cactaccaaaataaggccaaaagcagagactcatcaccaggcgaaggtctccgtttgaag
agtttatcacttccagtgggtattgcagaatctgatgtaaccaaaaaaccactagcacgt
acacagtctatagtgccatcagtgtccctcactctgccttctgctcttactcaagagact
ccaacacatgatctgggacccagcacgtcatctgcttcttcacactcgcaccaccacctc
atgcccccgcacatggatacacgcccacttgatccactgcgttcttcaactatgtttaag
agtgattcctctctctatcatatatattcctcccagagcactcaacctagctatggagca
tcgacttggtggaaggatcaaggaaatgaactaccaatgagggctatgactagccaacaa
ggggcacctcctcaaagcccttcccaaatgtatggctctcatctctctctcacaaaacaa
atgtctgatccagatcctgctgcatctgataatcctcacaggaagctgcagcgtcaactt
acacttaatccagcatatgattctcgcctgtacaagatagttggctttagagaaccagct
ccagagcactttccccttgccagttctggtcagcaacaacaacagacaacaggacagggt
tctccaagtagaaccatgaatcgtgataatgaagcattagccttctctcaagtggcaagt
ggcatgacaggacgtgtctctcctggatattcgtcaccatatggaagccgtgagcagcta
ccagcagggatgcacccacctcttgcccgtcattcatcacaagagagtgccaagcatatg
gtttctttgccacctcatttatatcccacatattcccatcctcatgtaacacgctttgca
tctgctccagacccaatctggggtggccatcagcaacaggcatctcctggaccaccacaa
attacacgcttaaattccacatctgatacaaggctaaatgtgtacagtagtagtgactca
cattttttcccagatgtttttgaagagcagttgggacgtttaccacaattccaaactttg
ggacctccgcatagtgtaagccctggcccaagtgctccttcaccaggaccaattggttct
aggccaatgtctccccaacaaggtccggttcatcatcactcgccaagtgtgtctccacga
cagcaaccagtgggattctcttcaaatttctctaatcctacaagtcatgaggatgctcgt
ttacatgttttttatcatctatcaaacctattcccagaggctcaggttagagctgtcttg
gcaatgtatccagaagaaactgacccccagaaaatatgtagttatattttgtcttgtaac
cctgggcctgttgggtcgcgcccaatgtctccccaacagctatcacagtcaggagtgggt
caccagtctcagggtgccccagtgtgtggatcctctcctctctcagctgggttttccagt
tcccttccaactgctgcctccagtcatgaggatgcacgtttacgtatattttataattta
tcacaattgtttcctgtagctcaagtgcgtgctgtcttagctagatatcctgaggaaacg
gatgcaaagcagttatgtgccacacttctaagtcatctaagtggcaatcagtcgtga
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