Procambarus clarkii (red swamp crayfish): 123759460
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Entry
123759460 CDS
T07930
Name
(RefSeq) LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase HERC4
KO
K10615
E3 ubiquitin-protein ligase HERC4 [EC:
2.3.2.26
]
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
123759460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcla04121
]
123759460
Enzymes [BR:
pcla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
123759460
Ubiquitin system [BR:
pcla04121
]
Ubiquitin ligases (E3)
HECT type E3
123759460
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
123759460
NCBI-ProteinID:
XP_045600512
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All DBs
Position
32:38615679..38650720
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AA seq
1045 aa
AA seq
DB search
MYCWGSTVNGELGVGAPEMEQLTLPCFMDFSESWNVKQVASGLMHSLILTEEGLVYSCGN
NEFGQLGHNKITRKPEQIDDLQNYTIVQVAVGDQHSIALTSWGLVYAWGENGFGQLGINS
TESHTSTPKLVKSLARKQALQIACGSNHTLALTSDGELYSWGQNNLGQLGLSHKEGPQKE
PALIRSLVGSPLVHITAGGHNSAALTHAGFLLTWGSNKYGQLGFTPKADPNLSDIPTLVP
NLESYSEPLLYVALGEGHTAVLDSRGKVWTFGYGRYGQLGHGTYDNESVPRTVLDLCGSR
VSQVACGRCHTIVYIPSQGQLYAFGQGLSGQLGIKTPHNRNLPQVVVGHWLSPRGVSLLD
NDEDDMPKIYVKKIFAGGDASMAVVMKEPEIADDYCKKHPHQLPLKIEESKINQMMGIGE
EDMIDDDLFTYMETVFGALACWNCSFIKEGADKHSHGLDYRLAEEYMAKLGRIPRVSIQE
VIQNSVHNIVGCLPRQPISRESLRCFVLLPLFKDFLDGRLMAKLQMPYAEALLNIQKGMA
AIFKVWMKVLPRDFTIRLITIYKGVIVQILSGAKQSSEIDRRSLISALKMLAFLHGENFM
EGAKAARISYEEFYIPEIGEKIDIRTDYLNWISSKIRPVARADSPISFCEYPFLFDAQAK
TLLLRADATRQMQGAIQEAVINSNPMLWLFNPAQVQFLNINIHRHKIVEDTINQLLHHGI
VDYKRPLKVHFIGEEAEDAGGVRKEFFLLLLREILNPDYGMFTEYPETRSIWFKEGSLEV
PATYALIGIVCGLAIYNFTIINLPFPLALYKKLLGQSVGLDDLLDVDPHLTRTLRELLEY
EGTDVEDVYCLNFTVTQDFFGETKSIPLKPDGENIPVTSQNKQEYVDLLVDYKLNKGIEA
QYKAFHEGFYRVCGCIVLKLFQPMELMALVIGNENYNWAELEKNTEYKGEYFSDHEVIKI
FWEVFYDLTLDQKKQFLIFLTGTDRVPILGMKALKMIIQSTADDSFLPVAHTCIGQLDLP
KYSTKEKLRYKLLQAIQQSEGFGLV
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgtattgttggggatcaacggtgaacggggagctgggtgtgggggctccggaaatggag
caactcacccttccctgcttcatggatttctctgaatcatggaatgtcaaacaagttgcg
tcgggtctgatgcattccctgatcttgactgaagaaggccttgtatattcctgtggtaac
aatgagtttggtcaactgggacacaacaagatcaccagaaaaccagaacaaattgatgat
ctacaaaactacactatagtgcaggttgcagttggtgatcagcactcgatagcacttact
tcttgggggctggtatatgcatggggagaaaatggatttggacagctgggtattaattcc
acagaatcccatacttcaacaccgaagttggtgaagagcttagcacgtaagcaagcactt
cagattgcctgtggatccaatcatacccttgctctaacatcagatggagaactctattcc
tggggccagaataatctaggtcagcttggtctgtctcataaagaaggaccacagaaagag
ccggctcttatcagatcgcttgttggaagccctttagtccatatcactgcaggaggacat
aactctgctgctcttactcacgctggcttcctgcttacatggggctcaaataagtatggt
cagttgggatttacgcctaaggctgatcctaatttgagtgacattccaacactggttccc
aatctggagtcgtattctgagccactgctttatgttgcacttggtgaaggtcatactgct
gttctcgactcacgtggaaaggtttggacatttggatacggtcgatacggtcaacttggt
catggtacatatgataatgagagcgttcctcggactgtgcttgatctctgtggatcaaga
gtcagccaagttgcatgtggaaggtgccatacaattgtatacattccatctcagggtcag
ctgtatgcatttggccaaggcttgtcgggtcaactgggaatcaaaacaccacacaaccgc
aatttgccccaggtagtagttgggcattggctttcaccacgtggagtcagtcttttggat
aacgatgaagacgatatgccaaaaatatacgttaagaagatatttgctggtggggatgca
agcatggctgttgtaatgaaagaaccagaaattgctgatgattactgcaaaaagcatcca
catcaacttcctctgaaaatagaagagtcaaagataaaccagatgatgggaattggggaa
gaggacatgattgatgatgatttgtttacgtatatggaaactgtatttggagctttggca
tgctggaactgttcctttataaaggagggggctgacaagcacagtcatggactggattat
agactggctgaagagtacatggcaaagcttggacgaattcctcgagtgtccatacaagaa
gtaatccaaaacagtgtgcataatattgtagggtgtctccctcgacaaccaataagtaga
gaaagtctccgctgctttgttcttcttccactttttaaggatttcttagatggacgactc
atggcaaagttacaaatgccatatgctgaggcccttctaaacatacagaaaggcatggct
gcaatcttcaaggtgtggatgaaagttttaccaagagatttcacaatcaggctcatcact
atctacaagggggttatcgttcagatactcagtggtgccaaacagtcatctgagattgat
aggcgatcactaatttcagctttaaagatgttagctttcctgcatggagagaatttcatg
gaaggagcgaaagcagccagaatatcatatgaagagttctacattcctgaaattggtgaa
aagattgacatccgaactgattacctcaactggatcagcagcaaaatcagacctgttgcc
agagcagatagtcctatctcattttgcgagtatcctttcctgtttgatgctcaggctaag
acactgttgcttcgtgctgatgccacaagacagatgcaaggggccattcaagaagcagtg
atcaacagcaacccaatgttatggttatttaatcctgcccaagtacagtttctgaatata
aacattcatcgccacaaaattgtcgaagatacgatcaaccagttacttcaccatggaatc
gtcgattacaagcgaccccttaaggtacatttcattggtgaagaagccgaagatgctgga
ggggttcgcaaagagtttttccttcttcttttgcgcgagatacttaatccagactatggc
atgttcacggagtacccagaaacgcgtagcatttggttcaaggaaggctctctagaagta
cctgctacatatgctctaattgggattgtgtgtggccttgccatctacaacttcaccatc
atcaatcttccttttcctttggctctctacaagaagttgcttggtcagtcagttggcctc
gatgatcttttagacgtagatcctcaccttacaaggaccttacgtgagctgctggagtat
gaaggaactgacgtagaggatgtttactgtctgaacttcactgttacccaggacttcttt
ggtgaaactaagagcattcctctgaaaccagatggtgagaatattccagttacttcacag
aacaagcaggaatatgttgatcttcttgtggactacaaactaaacaagggtatagaagcc
caatacaaagcatttcacgaagggttctatcgtgtgtgtggatgcatagtactcaagctc
ttccagccaatggagttaatggcccttgttattggtaatgaaaattacaattgggctgag
ttggagaaaaacacagaatataagggtgaatatttctcagaccatgaagttatcaaaata
ttctgggaagtgttctatgacctgacattagatcagaagaagcagttcctcattttttta
actggcactgatcgtgtaccaattttgggcatgaaggctttgaagatgattatacagtct
acagcagacgattccttcctgccagttgctcacacatgcattggtcaactggacctcccc
aagtatagtactaaagaaaagctaagatataagctgctacaagccatccagcagagtgaa
ggttttggccttgtataa
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