Procambarus clarkii (red swamp crayfish): 123759637
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Entry
123759637 CDS
T07930
Name
(RefSeq) ubiquitin-protein ligase E3C
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
123759637
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcla04121
]
123759637
Enzymes [BR:
pcla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
123759637
Ubiquitin system [BR:
pcla04121
]
Ubiquitin ligases (E3)
HECT type E3
123759637
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
SOGA1-2-like_CC
Motif
Other DBs
NCBI-GeneID:
123759637
NCBI-ProteinID:
XP_045600772
LinkDB
All DBs
Position
8:complement(8372054..8405679)
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AA seq
1071 aa
AA seq
DB search
MWSFEGDYRRKPQQRLGGASKTRNIERTELLSQLKSDREERERQRKREAAALTIQSWTRG
MLSQKRTKQGLRQRCDSELALAKVQGISEASTIRLIALLIRIFNPKEDCERLLVTCQLVV
REQRQLAEWICGSLPRWMYLVPRLANMALQVVAHSQDGVSPVPHAPPLRLLEIILAPASW
STTLSHPDQQLFLSTLYLHLINGGYYHQMVHLLVTRVPEVYETTEVPPTPLADSLLNLLM
KPLIFACAVNDSTLLSSVIQELCQDVFGGATHSQICNFVIPCLASSVNYKLPMDRIVAVL
GSRSLKFLDSCPAPPLLYSLLMLVHSSAEFHDANTLCNYLQAISELLGGATSYLVSDVSE
VDSDDEDEDMMDSSKPADPVLCKLAEECVSVVNSTEHVGWLLSHVERQVSPEVLLHFSRL
THHLLTAPSLQLHQCRLLYSVVARRQLLRSMWMVLSSLQQGAPLPGSINLMTSSFGVRGA
PLLQVLARGSPLAPYERDTLVPLLATFCATLTAVLSTLHDSEFLGDQDETGGHRNSKSSQ
NQLPFSVEELVKMSASLRDVCVGLVELAHPDMRMSAITDTSYKTMWAHCFKVCVGVVRQI
HLRDTRRMFCPEGHWLSSRVSLPMGNCQTVAFVPRTSRRQRRLFMPQRWLTRDELETEGP
PLSITEQRRATILQELPFVIPFESRTQVFSTLVASNRSMSQMRADFNEGPMISVSIRRTH
IYEDAFDKLSPSNEPNLRLRMRVRLMNAVGLDEVGIDGGGIFREFLSELLKTAFDPTRGF
FLLTRENTLYPNPGAHHIAEDYQTHYYFIGRMLGKALYENLLVEVPLAGYFVSKLLGRSS
SSVEFHHLDSLDPELCRNLLYLKTYQGDVQDLGLDFTVLNSDLGQNTIEELIPNGSNVAV
TNENRIEYIYRMADYKLNKQIAKQSQAFKKGVADVVPLEWLQMFDWRELQMLISGASVPI
DIVDLMDNTRYGGTYNAEHPTIQIFWQVLRGFDETQKRQLLKFVTSCSRPPLLGFKELQP
AFCIQPSGSEDRLPTASTCMNLLKLPEYKTEHSLRDKLLYAITSGSGFELS
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgtggagttttgagggcgactatcgtcgtaaaccacagcagaggttgggcggtgccagc
aaaacacggaatatagaacgtacagagcttctcagtcagctcaaatctgacagagaggaa
cgagagagacagcgaaagagagaagctgctgctcttactattcagtcatggacacgggga
atgttgagtcagaaacgaacaaaacaaggtcttcgacaacggtgtgatagtgaactagca
ctagctaaggttcagggaatatctgaagcttcaactataagattaattgccttacttatt
agaatatttaatccaaaagaagactgtgaaagattgcttgtgacttgtcaattggttgta
cgagaacaacgtcaacttgcagaatggatatgcggctctttaccccgctggatgtatctt
gtacctcgactggctaatatggctctccaagttgtcgctcactcccaggatggagtatcc
cccgtgcctcatgctccgcccctgcgattgttggagatcatcctggctccggccagctgg
tccacaacactctcacatcccgatcaacaactttttctgtctacactctacctacactta
attaatggaggctattatcatcaaatggttcacttgttagtaactcgtgtccccgaggtg
tacgaaactactgaggttcctccaacgccacttgcggattcattactcaacctactgatg
aagccccttatatttgcctgtgctgtcaatgactcaacactattgtcttctgtgatacaa
gagctgtgccaagatgtgtttggtggggcgacccacagtcagatctgcaactttgtcatt
ccgtgtctagcatcgagtgttaactataagttacccatggacaggatagttgcagtcttg
ggaagtcggtcgttaaagttccttgactcttgtcccgcgccgcctttactctactctctc
ctcatgcttgtgcactccagtgctgaatttcatgatgcaaataccttgtgcaactaccta
caagcaattagtgaacttttaggtggcgctacctcttacctagttagtgatgtaagtgaa
gttgattctgatgatgaagacgaagacatgatggattcgtcaaaaccagctgatcctgtt
ttatgtaagctagcagaagagtgtgtgtctgtggtgaacagcacggagcacgtcggatgg
ttactaagtcacgtggagcgtcaggtttctcccgaagtgttgcttcatttctcccgccta
actcaccacctcttaacagctccatctcttcagctgcatcagtgcagattactgtacagt
gttgttgcccgccgtcagctgttgcgatctatgtggatggtgttatctagtctacaacag
ggagctccattaccagggagcataaatttgatgacttcaagttttggtgtgcgaggagcg
ccattattgcaggtgttagctcggggctctcccctggctccatatgaacgagatacccta
gttcctctcctagctacgttttgtgctacgctcacagctgttctctccacactccatgac
tctgaatttttaggagatcaagatgagacaggagggcatcgaaactcaaaatcctctcaa
aaccagttaccattttctgtggaggagcttgtgaaaatgtcagcaagtctacgggatgtt
tgtgttgggcttgttgagctggcacacccagacatgaggatgtcggccatcacggacacc
tcctacaagaccatgtgggctcattgtttcaaggtgtgtgttggagtggtgcgccagata
catcttcgtgacacacgacgtatgttctgtcctgaaggtcactggttaagttctcgcgta
tcattaccaatgggtaactgccagactgtagcatttgttccgcgcactagtcgtagacag
aggcggttgttcatgcctcagagatggcttaccagagatgaattagaaacggagggtcca
cccctgtccatcacagagcagcgtcgagctactattttacaggaacttccatttgttatt
ccctttgagtcccgcacccaagtcttcagcaccttagttgccagtaacagaagcatgagt
cagatgcgtgcagatttcaatgaaggaccaatgataagtgtatccataagaagaactcat
atttatgaagatgcctttgataaactatcccctagtaatgaacccaatctccgattgcgc
atgagagttcgtctcatgaatgctgtaggtttagacgaagttggtatagatggaggcgga
attttccgagagtttttgtctgaattgttgaagacggctttcgacccaactcgaggattc
tttcttctaaccagagagaatactctttacccaaaccctggggcacatcatatagcagaa
gattaccagacacactattatttcatcggaagaatgttggggaaggcgttgtatgaaaat
ttgctagtggaagtcccattagctggatattttgtgtccaagcttttgggtcgatcatca
tcatccgtcgagttccatcatctagattcccttgaccccgagctttgtcgtaacctgctg
taccttaagacctaccaaggagatgtccaggatcttggattggatttcacagttctcaac
tctgatcttggccagaacacaattgaagaactaattcctaatggttcgaatgtagcagtt
acaaatgaaaatcggatcgaatacatctatcggatggctgactacaaacttaacaaacaa
attgcaaagcaaagtcaagccttcaagaaaggagtagcagatgtcgtacccctagagtgg
ctgcagatgtttgactggagagaacttcagatgctgatttctggagcttccgtcccaatt
gacatagtagacctcatggataataccagatacggtggaacatacaacgctgagcaccca
accatacagatattctggcaagtcctcaggggattcgatgaaacgcagaaacgacaactt
cttaaatttgtgaccagttgttctcgtcctcctcttctgggctttaaggagttgcaacca
gccttctgtatccagccttcaggctctgaagatcgccttcccacagcctccacgtgtatg
aatcttctcaaacttcctgaatacaaaactgaacattcattgagggacaaactcctttat
gctataacatctggctcaggttttgagctttcttaa
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integrated database retrieval system
