Procambarus clarkii (red swamp crayfish): 123759970
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Entry
123759970 CDS
T07930
Name
(RefSeq) thrombospondin type-1 domain-containing protein 4 isoform X1
KO
K23377
thrombospondin type-1 domain-containing protein 4
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
123759970
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pcla04990
]
123759970
Domain-containing proteins not elsewhere classified [BR:
pcla04990
]
Thrombospondin domain-containing proteins
ADAMTS-like proteins
123759970
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
TSP_1
ADAMTS_spacer1
TSP1_spondin
ADAMTS_CR_3
PLAC
TSP1_CCN
Motif
Other DBs
NCBI-GeneID:
123759970
NCBI-ProteinID:
XP_069181439
LinkDB
All DBs
Position
16:complement(25718737..25798160)
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AA seq
908 aa
AA seq
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MVVERLQKQGNARGGRWSKWSGWSPCSRSCGGGVSLQSRECLMDPRRRVRSRRRTAAGDP
GGSRCVGLYKRFQLCNTQECGPGYSDFRREQCASFNKTPFNRRFYTWEPYYDTPDSCALN
CRAVGLSFYATLNQTVIDGTPCGVLDSKRLCVAGRCLGVGCDGVLGSGLRLDACGHCGGD
NSSCRVIAGVFSRAKMPYGYNVIATLPRGAANITIQHVKASTNYLALRHQGGEFFINGNW
AVNGSGNYQSDGTTFTYQRPEHFQGDKVTAVGPLQQPVDVMLFYQSTNPGIKYEYRLPMS
PTSSAPRATGSVVVPGSPQRRRRPDNPLNPLVPGGPASRTPPSGPVNDARSINGNSVLSS
QRWKEEEEEKKKKLGGKKERRKGIRDKKGRRPRYEWKVAGFSSCSETCGGGTQTTRAACV
KRKRGNEVPSNHCRDLPRPAEETVRCNLRPCPATWEAEAWGPCSVTCGLGVQTRQLTCKM
KVSQDHFVAQPEGACLAPQDIPKAQVCELAVCNSAPAWRTGEWGQCSAQCGLGTRHRSVT
CVTAAGGVADHLCDPREKPSNQELCDMGSCATDTWFFSAWEDLCSEECGDGVQRRRVHCS
GDALDNQVTETSCDQEQRPATTRTCTSDRGCSGKWFTGPWGECSSQCGPGRRTRSVVCVV
FRGRWRVTTDTSQCKGDPRPDSTEACSRPCSHEWYTSEWSQCSASCGSGVQRREVKCLDD
SQIPALDCTSAAKPDTRQPCNTQSCHHEQADESVSNTSTRTELPPRPADPRPPGDAPGDA
PDHKPAGNVVLEAGWRPPPQSLETSSTGFPSSDDSPDYDEDTHRDSDWDLSSGRDLAEEY
GDVPPSRAPPTPSSRRRRPVSPGRPWRPGLSTDSCIDRMKNCHLVYKARLCRLKYYNKLC
CETCTKNQ
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atggtggtggagcgactacagaagcaaggcaacgcccggggtggccgctggagcaaatgg
tctggttggtcaccctgctcacggtcttgtggtgggggcgtctcactccagtctagggag
tgcctcatggaccccaggcgacgtgttcggagcagacgacggacagctgctggcgacccg
ggcggcagccgctgtgtgggactctataagcgcttccagctctgcaacacccaggagtgc
gggccggggtactctgacttccggagggagcagtgcgcttccttcaacaagacgcccttc
aaccgtcgcttctacacctgggagccctactacgacacaccagactcttgcgctctcaac
tgccgcgctgtgggcctcagtttctacgcaactctcaaccaaacagtgattgacggaacg
ccgtgcggtgtcctcgactccaagcgtctgtgtgtggccggcaggtgcctgggtgtagga
tgcgacggcgtactgggctcgggactgcggctggacgcatgcggccactgcggcggggat
aacagcagttgtcgggtgatcgccggtgtcttctcgagagccaagatgccatacggctac
aacgtgatcgccactctgccacgaggagctgccaacatcaccatccagcacgtcaaggcc
tccactaactacctcgctctgcgtcatcagggcggagagttcttcatcaatggcaactgg
gctgtgaatgggtctggcaactaccagtctgatggcaccaccttcacctaccagcgacca
gaacacttccagggggacaaggtgacggcggtgggtcccctccagcagcctgttgatgtt
atgctgttctaccagtcgaccaacccaggcatcaagtacgagtaccggctgcccatgtca
cccacgtcgtcggcgccacgggcgacgggaagcgtggtggtgccggggtctccacaacga
cgccgtcgaccagataacccactcaaccccttggtgccaggaggaccagcctccaggacc
ccgccctctggtccagtgaatgacgctcgctccatcaacggcaactccgtcctctcctcc
cagagatggaaggaagaggaggaggagaagaagaagaagctgggaggaaagaaagagcgt
aggaagggcatcagagataagaagggaaggaggccgaggtatgaatggaaggtggcgggc
ttcagcagctgctcggagacctgtggcggagggacgcagacgacgcgggcggcgtgtgtc
aagaggaagagaggtaacgaggtcccatccaaccactgtcgcgacctgccccgtcccgca
gaggagactgtccgctgcaaccttcgaccctgtcccgccacgtgggaagcggaggcgtgg
gggccgtgcagtgtgacgtgcgggctgggcgtgcagacccggcagctgacgtgcaagatg
aaagtctcccaagaccacttcgtggcgcagccagagggcgcctgcctcgcccctcaggac
atacccaaggcacaggtgtgcgagttggcggtgtgcaactctgcgccggcgtggcggacg
ggggagtggggtcagtgctcagcgcagtgcggtctggggaccaggcatcgctccgtcacc
tgcgtcacggccgctgggggcgtcgccgatcatctctgtgaccccagggagaaacccagc
aaccaggagctgtgtgacatgggctcctgcgctacggacacctggttcttctccgcgtgg
gaagacctctgctctgaagagtgtggcgacggagtccagcgacgccgcgttcattgctcc
ggcgacgcccttgacaaccaggtcaccgagacgtcgtgcgaccaggagcagcggcccgcc
actaccaggacctgcacctccgaccggggctgcagcggcaagtggtttacaggtccatgg
ggggagtgcagctcgcagtgcggtccggggcgccgcacgcggtctgtggtgtgcgtggtg
ttccgcggacgctggcgggtgacgacggacacatcgcagtgcaagggcgacccgaggccg
gactcgacagaggcctgcagcaggccgtgcagccacgagtggtacacctctgagtggtct
cagtgttccgcgtcgtgcggcagcggcgtccagcggcgggaggtgaagtgtcttgacgac
agtcaaataccagccctcgactgtacgtcagccgccaagcccgacacccgccagccctgc
aacacccagtcctgtcaccacgaacaagcggacgagagcgtgagcaacacctccacaaga
accgaactgccgccgcggccagccgacccccgacccccgggcgacgcccccggcgacgcc
cccgaccacaaacctgcaggtaatgtggtccttgaggccggctggcgcccgccccctcag
tcactagagacttctagtacaggcttcccgtcttccgatgacagtccagactatgacgaa
gacacacatagggattccgattgggacttgtcctctgggagggacctggcggaggagtac
ggggacgtgcctcccagcagggctccgcctaccccaagcagcaggcggcggcgacccgtc
tctcctgggcggccatggcgacccgggctgtccacagattcttgcatcgacagaatgaag
aactgtcacttggtatacaaggctcgcctttgtcgccttaagtactacaacaaactgtgt
tgtgaaacttgcaccaagaaccagtga
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