Procambarus clarkii (red swamp crayfish): 123759985
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Entry
123759985 CDS
T07930
Symbol
beta-Spec
Name
(RefSeq) spectrin beta chain isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla04517
IgSF CAM signaling
pcla04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
123759985 (beta-Spec)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
123759985 (beta-Spec)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pcla04812
]
123759985 (beta-Spec)
Cytoskeleton proteins [BR:
pcla04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
123759985 (beta-Spec)
Intermediate filaments
Intermediate filament-binding proteins
123759985 (beta-Spec)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
DUF2498
Motif
Other DBs
NCBI-GeneID:
123759985
NCBI-ProteinID:
XP_045601231
LinkDB
All DBs
Position
16:complement(26963656..27081047)
Genome browser
AA seq
3033 aa
AA seq
DB search
MEDNCSAMEDDCSQKSSDQIFEQQSMGSSQIIREEQCNRERKQWRKSLGDAWRYSLGDFE
GNILTNETTNSAKCRVVPTEKECNKTAGTDASDDLPDAMLGYKLESVDGIKYKSTTSTQL
SSNILTVADKCSISENSDNCSDQNADYFRDGSKSDGDTCSDTRSEPVLMRSTSTSCSSPH
DKSPTSPSSSEDAFHDMKFTISPWSPSSGCTQSVRLIKVRTRNVRRSLSNDPDIQSRYIA
SMEHHIKLLKDERESVQKKTFCKWVNSHLVRVSARIADLYVDLRDGKQLIKLLEILSGER
LPRPTKGKMRIHCLENVDKALQFLRDQRVHLENMGSHDIVDGNARLTLGLIWTIILRFQI
QDITIEETENQETKSAKDALLLWCQMKTAGYHNVNIRNFTTSWRDGLAFNAIIHKHRPDL
VQYEKLSRSNPIHNLNNAFNVAENKLGLTKLLDAEDIFVEQPDEKSIITYVVTYYHYFSK
LKQETVQGKRIGKVVGIAMENDRMIREYEGLTSDLLKWIETTIESLNDRDFANSLTGVQT
QLTQFNTYRTVEKPPKFVEKGNLEVLLFTLQSKMRANNQKPYLPKEGKMISDINKAWERL
EKAEHERELALREELIRQEKLEQLAARFNRKAGMRETWLSENQRLVSQDNFGFDLAAVEA
AAKKHEAIETDIFAYEERVQAVVAVAQELETERYHDIERINARKDNVLRLWNYLLELLRL
RRMRLELSLQLQQNFQEMIYILDSMEDMKVRLLSEDYGKHLMGVEDLLQKHSLLEADINV
LGERVKTVIEHSQRFLDDEQVEGYRPCDPSIVLERVQQLEDAYGELVKLAVERRLRLEES
RKLWQFYWDMAEEENWIKEKEQILSTSDIGHDLITVNLLLTKHKTVEEELLSHEPQIMAV
VKVGEELIVQQHFGSDKIQERIDEIMGMWNSLKEKSATRKKRLTDAVDLHQFYTEADDVD
TWMLDILRLVSSEDTGRDEATVQSLLKKHKDVTEELKNYATTIEALHQQASELNEIDRES
PDVVERLASIDRRYKELLELAKMRKQRLLDALSLYKLFTEADGVEQWIGEKERMLQTMVP
AKDIEDCEIMKHRYEGFEQEMNANASRVAVVNQLARQLLHVEHPNSEDIVTRQNQLNQRW
AELREKAENKREELNSAHGVQTFHIECRETVLWIEDKKRVLMETADLGTDLSGIMTLQRR
LSGMERDLAAIQAKLDSLEREADKISKDHPEEAELIRERVEQIRAVWDQLTQLLKERDAK
LEEAGDLHRFLRDLDHFQAWLTKTMTDVASEDIPSNLAEAEKLLSQHQSIREEIDNYTED
YTKMMEYGERITAEDVTPADDAQYMFLRERLKALKDGWAELHQMWENRQQLLSQSLNLQM
FLRDTKQGEVLLSQQEHYLSKDETPTNLEQAENLIKRHEAFLTTMEANDEKINGICQFAQ
RLLDEEHFAADKIQKKAENIEERRQQNRERAMEQMERLRDQLQVHQFLQDCEELNDWVQE
KHIIAQDESYRSAKTVHSKWTRHQAFEAEIASNKDRLIRVQQAGEELVKEKPEMAELIGP
KISELNQHFDALETTTKEKGERLFDANRQVLYEQTCDDIDTWMTDLEKQIEGRDTGMDLT
SVNILMQKQQMIETQMAVKAKQVEQLESQADYLQRMTPEKTEEIKLMKAMVEKKFESLKA
PLDERNWALAKKKEAYQFRRDVEDEKLWILEKMPQASNTEYGNSLFTVHMLKKKLQSLST
EIDNHEPRINLVCANGRKLIEEGHESADEFHKLLEDLLDHWAKLKDALEHRRSKLLVSEK
AQQYLFDASEAEVWMSEQELYMMVEDRGKDEISAQNLMKKHQSLECAVADYAETIRQLGE
TARHLINEEHPDSEQIGIRQSQIDKLYAGLRDLAVERRSKLDEALKLFMLNREVDDLEQW
IAEREVVAGSHELGQDYDHVSMLRDRFKEFARDTETIGTERVAAVNEIADQLISAGHSDA
ATIAEWKDGLNESWADLLELIETRTQMLAASWELHKFFHDCKDVLSRILEKQNSISDELG
RDAGSVSALQRKHQNFVQDLVMLQQQVQQVQEDSSKLQAAYAGDKAREITNREAEVVSAW
LNLQGMCEDRRIKLHDTGDLFKFFNMVRTLILWMDDVIRQMNTTEKPRDVSGVELLMNNH
QSLKAEVDAREDNFNVCVFLGKELLSRNHYATPEIKEKLMSLSNQRINMLQRWEERWEHL
QLILEVYQFARDASVAEQWLLAQEPYLVSSEFGRSIDEVENLIKKHEAFDKACSAQEERF
AALERLTTLEALIVTDARSRANSVPGTSVHRTFLLPYSPPPASHRRHSLPTSVHAFFTAF
SCPALTQLQAARFTSIHTLPENMLANSALRDSLKKCRRRLNSTSNPQLSLTMHVKDSDTD
SLFSDMLNQRCCYYEGRPTSAPPTNSLHIGSKHSSFNNISTSASRSQSVENRECTNGKSL
HLGVQDGGWDTKSSGSVYEFVSVDEYEAPYLEESSDRISEFCSYGVELGELDCINELEDD
EMSEPVSSYKAYRKSQIYGYTDTADDSTTLPPIYELEGEGSEITELTDTRSVEFLSSESL
LDKSENSSRKNSKTSYEVPQYPKLMDQNYCAQYCSDNDSIMSYYSVVPREGFTDSIRNVD
HLVGKLDLRNVQGCPSPVSPFPLTPPNTCDSSPKFLNIKHPARNNLHALCGVEYELKELK
RKQEEEEEERRRQEELARQAAAPPPQSPDQPTDGVDGAAEDSHLNGEELDESQEAVEPPS
AVLPSKGQPHTLPREHDESGAVRGGSAPSTPRPPSTPVTPTAASSAVRGRPVSATLPPQS
SLSSPASPPTPASKESRRRVRSRSKSPFRSFRWKKSKSSPSGAPGSASDDESNLERAAER
PSPSGDEDQLEGSLVRKHEWESTTKKASNRSWDKVFLVLRGNMLMFYKDRKSYQAAPEVF
FRAEAPCDVSGGQASIADDYTKKKHVLRLKLIGGAEYLFQAKDEEELTVWVGSLQMAASA
EGSAGPSRSQTLPAGSEKKDEPKRRSFFTLKKK
NT seq
9102 nt
NT seq
+upstream
nt +downstream
nt
atggaagataattgctctgcaatggaagatgattgctcacagaagtcaagtgatcagatt
tttgagcagcagtcaatgggttcatcccagatcatcagggaggaacaatgtaatagagag
agaaaacaatggaggaaatctcttggtgatgcttggagatactccctgggtgattttgag
ggtaatattctcactaatgagactactaacagtgccaagtgtcgtgtagtacccacagaa
aaggaatgtaataaaactgcgggcacagatgcaagtgatgatttacccgatgccatgctt
ggctataaattggagtctgtggatggcattaaatacaaatctactacctctactcagttg
tccagcaacatattaacagttgcagataaatgcagtatcagtgaaaattctgataattgt
tctgatcaaaacgctgattatttccgagatggatcaaagagtgatggagatacatgcagt
gatacacgcagtgagcctgtattaatgagatctacttcaaccagctgctccagcccgcat
gacaagtctcctacatccccatccagtagtgaggatgcgtttcatgatatgaaatttacg
atatctccctggtccccatctagtgggtgtactcaatcggtgcgtcttataaaggttcga
acaaggaatgtcagaagatcattaagcaatgatcctgatatacaaagccgatacatagca
tctatggaacaccacattaaactactcaaagatgagcgtgagagtgtgcagaagaaaacc
ttttgtaaatgggtaaattctcacttggttcgtgttagtgctcgaattgcagacctctac
gttgatcttcgagatggaaagcaactcatcaagcttctggagatcctctctggagaacga
ctaccacgacccaccaaaggaaagatgagaatccactgccttgagaatgtagacaaagct
ttgcagttcctccgggatcaacgcgtccacttggagaacatgggttcacacgacattgtc
gatggtaatgcacgtctcacattgggtctcatctggaccattatcctccgcttccaaatt
caagatattaccatcgaagagacagagaatcaagagacaaaaagtgcaaaggatgctctt
cttctttggtgtcaaatgaagactgctggttatcacaatgttaacatcagaaatttcact
acatcttggagagatggcttggcttttaatgccatcattcacaagcatagaccagatttg
gtgcagtatgagaaattatctcgttcaaatcccattcacaacctcaacaatgctttcaat
gtggctgaaaacaaactggggcttacaaaactcttggatgctgaggatatatttgttgaa
cagcctgatgagaagtcaattattacctatgttgtcacctactaccactacttctcaaag
ttgaagcaggagacagttcaaggcaaacgtataggcaaggtggttggtattgccatggag
aatgataggatgatcagagagtacgaaggcttgacctcggatcttctcaagtggattgaa
actacaattgaatctcttaatgaccgagattttgccaactccttaactggagttcaaacg
cagttgacacagttcaacacttaccgcactgtagaaaaaccaccaaagtttgtagaaaag
ggtaaccttgaggtgctgctttttactttacaatcaaagatgcgagctaacaaccaaaaa
ccatatttgcctaaagaaggtaaaatgattagtgacatcaataaagcctgggaacgtttg
gagaaggcagaacacgaacgagagttagcattgcgagaagaactcattcgtcaagagaaa
ttggagcagctggcagctagatttaaccgcaaggctgggatgagagaaacttggctgtct
gaaaaccaacgtcttgtttctcaggacaactttggctttgatttggcagcagtggaagca
gcagcaaagaaacatgaagctattgagactgatatctttgcttatgaggaacgtgtacag
gcagttgttgcagtggcacaggaacttgagactgaacgatatcatgatattgaacgcatt
aatgccaggaaagataatgtgttacggctatggaactacttgctggagcttttgcgcctt
cgtcgtatgagactcgaactttccctacaattgcaacagaacttccaagaaatgatatac
attctagattctatggaagatatgaaagtacggctgttaagtgaagattatggaaaacat
cttatgggtgtagaggacttgctgcaaaaacattccttgttggaggcagatatcaatgtt
ctgggtgagcgtgtaaaaactgttatcgaacattctcaaaggttccttgatgatgagcaa
gtggaaggttatcggccatgtgatccatccattgtcttggaacgtgtgcagcaattagaa
gatgcttatggtgaattagtcaagctggcagtggagcgtcgactgcgtttggaagagtcc
cgcaagttatggcagttctactgggatatggcagaggaggagaattggatcaaggagaag
gaacaaattctgtcaacttcagatatagggcatgacctcattactgttaacctactcttg
actaagcacaaaactgtagaagaagaacttctttctcatgaaccccaaataatggctgtt
gtcaaggttggagaagagctaattgttcagcaacactttggttccgacaaaattcaggaa
agaattgatgagattatgggaatgtggaacagccttaaggagaagtctgcaaccagaaag
aagaggttgacagatgcagtggacctgcatcagttctatacagaagccgatgatgtggac
acatggatgctagatatactgcgtttggtatccagtgaagatactggcagagatgaagcc
actgtacagtctctacttaagaaacacaaagatgttactgaagagttgaagaattatgcc
actacaattgaagctcttcaccaacaagcatcggagcttaatgagattgacagagagtct
ccagatgtcgttgaaaggttggcatcaattgatagacgttacaaagaactcctggaattg
gcaaagatgcgtaaacagagacttcttgatgccttgtcattgtataaattattcactgag
gcagatggtgttgaacagtggataggagagaaagaaagaatgcttcaaacgatggttcca
gcaaaggatattgaagattgtgagatcatgaaacatagatatgaaggatttgaacaggaa
atgaatgctaatgctagtcgtgttgcagtagtgaatcaactagctcgccagctgctacat
gttgaacaccctaattcggaagacattgtaacccgccagaatcagttaaaccagcgatgg
gcagagctacgggaaaaggctgagaacaaacgtgaagaacttaactctgctcatggtgtt
cagacattccacattgaatgccgagaaactgttctgtggattgaggacaagaagagagtc
ttgatggagacggctgatcttggtactgatctaagtggtatcatgactctacagcggcgt
ctttctggtatggagcgagacttggcagccattcaagcaaagttggattctttggaaaga
gaagcagataagattagtaaagaccatcctgaagaagctgaacttattcgtgaacgtgtt
gaacaaattcgtgctgtatgggatcagcttactcaactcttgaaggaacgtgatgctaaa
cttgaggaggctggtgatcttcatcgcttcttgcgtgatttggatcatttccaggcctgg
ttgacaaagaccatgactgatgttgcctctgaagatattccatctaatcttgctgaagca
gagaagcttcttagtcagcaccagtctatcagagaagagattgataattacactgaagat
tacactaagatgatggaatatggtgaacgtataactgcagaagatgtcactccagctgat
gatgctcagtatatgttcttaagagaacgtctgaaggccctgaaggatggctgggcagaa
ttacaccagatgtgggagaacagacaacagcttttgtcccagtctcttaacttgcaaatg
ttcttgcgtgacaccaaacaaggtgaagtacttcttagccagcaggagcactacctcagc
aaggatgagacgcctacaaacttggaacaggcagagaacctcattaagagacatgaagca
ttccttacaaccatggaagctaatgatgaaaagataaatggcatatgtcaatttgctcag
aggcttttggatgaagagcactttgcagcagacaaaatccagaagaaggcagaaaatatt
gaagaacgtcgtcaacaaaatagagaacgagcaatggagcagatggaacgtttaagggac
caattgcaagtacatcagttccttcaagactgtgaagaactaaatgattgggtccaggaa
aaacatatcattgcccaagatgagagttatcggtcagccaagactgtgcatagtaagtgg
acccgtcaccaggcctttgaagcagagattgccagcaataaagacaggttaatcagagta
caacaggctggagaggaattagttaaagaaaaaccagagatggccgagctcattggaccc
aagattagcgaacttaaccagcactttgatgctcttgaaaccactaccaaagaaaagggt
gaacgtctgtttgatgctaatcggcaagtgctttatgagcagacttgtgatgacattgat
acttggatgacagacttggaaaagcaaattgaaggtcgtgatacaggaatggatcttact
tctgtaaatatactcatgcagaaacaacaaatgattgaaacacaaatggctgttaaagcc
aaacaagtggaacagttagaaagtcaagctgattatttacaacgcatgacaccagagaag
actgaggaaattaaattaatgaaggcaatggtagaaaagaagttcgagtcgctcaaagct
cccctagatgaacgtaattgggctctggcaaaaaagaaagaagcatatcagttcagaaga
gatgtggaggatgagaagttatggatactagaaaagatgccacaggcatctaacacagaa
tatggcaactctctcttcaccgtccacatgctaaagaagaagctccagagtttaagcaca
gaaattgataaccatgaaccacgcattaatttggtatgtgcaaatggcagaaaacttatt
gaagaaggacacgagagtgcagacgaattccacaaattgttagaggatttgttagatcat
tgggccaaattgaaggatgccttagagcacagacggtcaaaacttttggtgtcggaaaaa
gcacaacaatatctctttgatgcaagtgaggcagaggtttggatgagtgaacaggaactt
tacatgatggtggaggatcgtggcaaggatgaaatttctgctcagaacttgatgaagaaa
caccagagtttagagtgtgctgtagcagactatgcagaaacgataagacagcttggagaa
acggcgagacatcttattaatgaagaacatcctgacagtgaacagataggaatcagacag
tcacaaatagataagctgtatgctggactgcgggaccttgcagtagaacgacgcagcaaa
ttagacgaagccctcaaactgtttatgttgaaccgtgaagttgacgacttagagcaatgg
attgcagaacgggaggtagttgctgggtcgcatgagcttggtcaagactacgaccatgtc
tcgatgctccgtgatcggtttaaggagtttgctcgtgacacagaaactattggaacagag
cgagttgcagctgtcaatgagatagctgatcagttaatatctgctggtcattctgatgca
gccaccatagcagaatggaaggatggtctgaatgaatcttgggctgacttgctggagcta
attgagacacgcacacaaatgttagcagcttcttgggaactacataaattcttccatgat
tgtaaggacgtactgagtcgcatcctagaaaaacagaacagcatatcagatgaacttggc
cgtgatgctggttcagtttcagctctacaaagaaaacatcagaactttgtacaagacttg
gttatgcttcaacaacaggtccaacaagttcaggaagattcgtccaaactacaagcagca
tatgcaggtgataaagctcgtgagattaccaatcgtgaagcggaagtggtctcagcatgg
ttgaatttacaaggcatgtgtgaagacagacgaattaagctacatgacactggagatcta
ttcaaattcttcaacatggtgcgcactctaatattatggatggatgatgttatcagacag
atgaacactactgaaaaacccagggatgtaagtggtgtagagttgttaatgaacaatcat
caaagtttgaaagcagaagtagacgcacgggaagacaactttaatgtgtgcgtgtttctc
gggaaggagttactctcccgaaatcattatgccacaccagaaattaaggagaagcttatg
tcgcttagcaaccagcgcatcaacatgcttcaacgttgggaagaaagatgggagcatctg
cagctcattttggaggtgtaccagtttgctcgtgatgcatctgtagcagagcagtggctg
cttgctcaggaaccgtacctcgtatcatcagagttcgggagatctattgatgaagttgaa
aaccttatcaagaagcatgaagcatttgataaggcatgttcagcccaagaagaacggttt
gctgccttagagagattaactacgcttgaagcccttatagtaactgatgcaagatcacgt
gctaacagtgttccaggaaccagtgtccaccgtaccttccttcttccttactctcctcca
ccagcttcgcatcggcggcactcacttcccacttctgttcatgcattcttcaccgcattt
tcctgtcctgctctaacacagttacaggctgctaggttcaccagtattcatacattgcca
gagaacatgctggcaaattcagctcttagggattctttaaagaaatgcaggagaagatta
aattccacctcaaatccacaattgtctctaactatgcatgtaaaagattcagatacagat
agtttgttttcagatatgttaaatcagcgctgctgttactatgaagggcgtcctactagt
gcccctcctactaattcattacacataggctccaaacattcttcctttaataatatatcc
acatcagcaagtcgatctcaatctgtggaaaatagagaatgtacaaatggcaagtcatta
catttaggtgtccaagatggaggctgggatactaaatccagtggttcagtttatgaattt
gttagtgtagatgagtatgaagctccatatttagaagagtctagtgacagaatatcagaa
ttttgttcgtatggtgtagaacttggagaacttgattgtattaatgaattggaggatgac
gaaatgtcagagccagtaagtagttataaggcatataggaaaagtcagatatatggttat
acagacacagctgatgatagtactactctaccacctatttatgagttagaaggcgaggga
tctgaaattactgaactgactgatacgagatctgttgaatttttgagctctgaaagtcta
ctcgataagtcagagaactcgagtcgaaagaatagtaaaacctcgtatgaagttcctcag
tatccaaagctcatggaccaaaattattgtgctcaatattgctctgataatgattccatc
atgagttattactcggttgtccctcgtgagggctttacggatagcatacgcaatgttgat
catttagtaggaaaactagacttaaggaatgtgcaggggtgtccctcacctgtctcacct
ttccctctcactccacccaatacctgtgattcctctcctaagttcttaaatattaaacat
cctgcaagaaataacctgcatgctctgtgtggtgtagagtatgaactgaaggaactaaag
cgaaagcaagaggaggaggaggaagagcgacgaagacaagaagagttggcgagacaagct
gctgctcctccgccacagtcaccagatcagcctacagatggagttgatggtgcagcagag
gactctcatctcaatggagaggagctcgacgaatcacaagaagctgttgaaccaccatca
gcagtgcttccttccaagggccaaccccatacgttgccccgagagcatgatgagagtgga
gcagtgcgagggggtagtgcacctagcaccccacgacctccttccactcctgtcaccccc
actgctgcatcgagcgcagtccgagggcgccctgtctccgccaccctccctccacagtca
tccctgtcatccccagcttcgccccccactcctgctagtaaggagtcgcgacggagggtg
cgttctagatcgaagtctccattccgctctttccgctggaagaaatccaagtcttctcca
tccggagcaccgggtagtgcatctgacgatgaatcaaatctggagagggcagcagaacga
ccaagccccagtggagatgaagatcagctagagggcagcttggtgcgtaaacacgaatgg
gaatctactacaaagaaggcctctaatcggtcttgggacaaggtgttcctggtgctccgt
ggaaacatgttgatgttctataaagatcgcaagagctatcaagctgctccagaagtcttc
tttagagctgaagcgccttgtgatgtttcgggtggacaagcatcaattgctgatgattac
acgaagaagaagcatgttctacgacttaaattgattggtggtgctgagtatttgttccaa
gccaaagatgaagaggagctgacagtatgggttggatctctccaaatggctgcatccgct
gaaggatcagccggtccttctcgctcccagactctcccagctggctccgagaagaaagac
gagcccaagagacgcagcttctttactctcaagaagaaataa
DBGET
integrated database retrieval system
