KEGG   Procambarus clarkii (red swamp crayfish): 123759990
Entry
123759990         CDS       T07930                                 
Name
(RefSeq) gem-associated protein 5 isoform X1
  KO
K13133  gem associated protein 5
Organism
pcla  Procambarus clarkii (red swamp crayfish)
Brite
KEGG Orthology (KO) [BR:pcla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pcla03019]
    123759990
   03041 Spliceosome [BR:pcla03041]
    123759990
Messenger RNA biogenesis [BR:pcla03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     123759990
   mRNA cycle factors
    P-body specific factors
     123759990
Spliceosome [BR:pcla03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   SMN complex factors
    123759990
SSDB
Motif
Pfam: TPR_GEMI5 Beta-prop_THOC3 Beta-prop_RIG_2nd Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_Prp19 Beta-prop_EML_2 WD40_WDHD1_1st ANAPC4_WD40 WD40 Beta-prop_WDR36-Utp21_1st Beta-prop_Aladin Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd WDR55 Beta-prop_EML Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_HPS5 WD40_Gbeta Beta-prop_CAF1B_HIR1 WDR90_beta-prop_4th Beta-prop_EIPR1 EIF3I Beta-prop_WDR41 Beta-prop_IFT122_1st Beta-prop_TEP1_C Beta-prop_SPT8 GEMI5_RBS
Other DBs
NCBI-GeneID: 123759990
NCBI-ProteinID: XP_045601247
LinkDB
Position
16:27161046..27198688
AA seq 1517 aa
MMDDYQEFDRYWERDDFFSFGSLPKCQCHYDYEDFIMHEIGEILLPPSPNWFLSDAIDSR
DEDNLLVAASFKAIVVYEVTGEKRLPRVLKVIPHSSERVLSVRLHRKVSEPDYGHTVAST
SDTSVVRLYNLHTGDVIAQHQEHQGLNVNGICWGSIGGEEVVVTVSSGGRMVVWQARHGA
TRIHTIREFSELTLVEINPKNPSQALVAAEKDIALVSLKDGGVLTHLHGHDYGVYCIRWY
LGDGNPFSQDSGPINHRAEALKDSYAKVNGESGKNKDKNSENGKQQNNKAVGTFEGPFFV
SSDYGRNFLLWDLSAKRYITKANVPLSASGFKKQTSSKDKITGKQHIALAWHNGSLISSS
VRGELLQWTLQPGGAKFKVLHHLHNRVLYNVMVMGDIVVTSGQDRFLHGFHIGNSSHMFQ
LTTLGASATTFSFCPHDANRLALGSLENNIRLLNFGHEVPLHTQIVWQNIKGKILSLSWH
PSHEGRLLFGTGSGQVGYVDVSSGRVSSFAYYHQKAVYKVEWGPPVCSQQTGLTDDWCAY
SFGDREIVIRTSSDPMADPVHLLKLIPESDSGKIPKDITEFSFSPDYKYLAIGSQDGQVR
IYQSCDLKLMVTLVVVRKAVQHLLWQPATDSGIPYILAVGSSENKIQIFHLEKRLKGEEV
GSIVTQASQELCGHEARVVWLAWSPHKDGLLASASYDHTVQLWDTKTGEPVVNYGGHSTR
VFRVEFSPTDPDLLYSFAEENNVHSWRPSKLNCKTSSDSSATLKEFRPKRIKEKEQETIL
QKEAEKTKDTPAPAPSSEKKTGATSSNNVSNTATNNATGSNKKTPSKSFFPKLHVVSSRK
KSFHQLAILCLLNRTKAGGTEDVTNGKDDEIEEEEDLEEDLEESVTKDGVVDDLANIVET
SEKYRCLLEKDTEMADPSDFIYALNMYGKPQQLDSLLAAEIQHHEARGNVGQTGFMHCWR
GSLDEHIRSAARHKKLTPFLVASAPQVSIKLWELACEAYAEQLLDEGDVITAASYLVNIN
KVKEAVSMLLKHRHYREALAITKCRLSYDEEMLEKVTCAWAASAIYEGNFDIASILHLSI
GHVEEAARCMSRRSDPGSLFVSSKIYEHVGNADLANSVGLLALKEACLKHEHHKIEPFLA
HLPNLNWFKTVSCCQSVILDLLQEVGTQKGGHINYLMRSRKEQTNKASQETLIEGNLVNG
NADAEEKNGICANGNGEVVTENECCVSEEWVPLLERIEEAWLAQGITQDQYPQLYEAVTL
NFSTQQMPTSVKQLWFLVAVALSECLLSSCQETWDQHLTSALSYVVSWGKPDHILHLTHA
LLPKGVNDLTTLGTAVIEQEDKNNSSSVNHLRHLYYAAEISLLHSYLKTDESWSKLHDYS
SEIQNQIHETEKLKSVTENESVSSDGQVTVESKLASLTLSANDSESSDSKQVEKVEHDRI
YCLPQSSDELIAILNFYIDGMSPEYMIAPEIMGLSSGLASPDKLLLEIILKLKEKGNVKE
QEIRNLLCKVPANRTRS
NT seq 4554 nt   +upstreamnt  +downstreamnt
atgatggatgactatcaggagtttgatcgatattgggagagagacgacttttttagtttt
ggctccctcccaaagtgtcagtgccattatgactatgaggattttatcatgcatgagatc
ggagaaattctgcttccaccatctccaaactggttcctcagtgatgctattgacagtcgg
gatgaagataatctgttggttgctgcatcttttaaggctattgtagtgtatgaggtaact
ggggaaaagagactaccaagagtgctcaaggtaatacctcacagcagtgaaagagttttg
tctgttcgattacatcgcaaagtgtccgagccagattatggacacacagttgcaagcact
agtgatacgtcggttgttagattatataatttacacactggtgatgttattgcacagcat
caggaacaccagggtcttaatgttaatggcatttgctggggcagcattggaggagaagaa
gtcgtagtgacagtgagcagtggtgggcgtatggtagtgtggcaggcaagacacggtgca
acacgtatccatactattcgtgagttttctgaactcaccttggtggagattaatccgaag
aatccttcacaggctcttgttgctgctgaaaaggatattgcacttgtctctctaaaagat
ggaggagttcttacgcacctgcacggccatgattatggagtgtactgcataagatggtac
cttggtgacggtaacccattctcacaggattctggacctatcaatcacagggcagaagct
ctaaaggatagctatgccaaagtcaatggtgaaagtgggaaaaataaggataaaaattca
gagaatggtaaacagcagaacaacaaagccgtgggaacttttgagggcccattctttgta
tcttctgattatggccgcaacttcttactgtgggatctgtcggccaaaagatacataacc
aaagctaatgttcccctctcggcatctggctttaaaaaacagacatcaagtaaggacaag
atcactggaaagcaacacattgctttggcatggcataatggaagcctcatatcttcatct
gttagaggagagcttcttcagtggacactgcaacctggaggcgccaagttcaaagtatta
caccatcttcacaaccgagtcctctacaatgtgatggtgatgggggacatagttgtgacc
agtggacaagatcggttcctccatggctttcatattgggaactcttctcacatgtttcaa
ttgactacgcttggtgctagtgctaccaccttttctttctgcccacacgatgccaacaga
ctagctcttggatctctggagaacaatataagacttctgaattttggtcatgaggtaccc
ttacacacacagattgtttggcagaacatcaaaggaaagattctgtctctttcatggcac
ccatcacatgagggtagattactatttggcactggatcaggccaggtaggatatgtggat
gtatccagtggacgtgtatcctcatttgcttactaccatcaaaaggctgtgtacaaggtt
gagtggggaccaccagtctgttctcagcaaacaggactgacagatgattggtgtgcatat
tcatttggagatagagagattgttattcgcacttcatctgaccccatggcagacccagtt
cacctgctcaagttgatcccagagtcagattctgggaagattcccaaggatattacagag
ttctccttcagcccagactacaagtatttggcaataggatcacaagatggacaggtgcga
atttatcagagctgtgacctgaagttgatggtgacactagttgtggtgagaaaggctgtt
cagcatcttctttggcaacctgctacagactctggcattccatatattttggctgttggc
tcaagtgaaaataaaatacaaatttttcacttagaaaagcgtcttaaaggagaggaagtt
ggcagcattgtaacacaagcaagtcaagagctgtgtggtcatgaggcacgagtggtgtgg
ttggcgtggtcgccacacaaggatgggctcctggcctccgcttcctatgatcacactgtt
cagttatgggatacaaaaacaggagaaccagtggtcaactatggcggacattcaacaagg
gttttccgtgttgagtttagcccaactgatcctgacctgctgtacagttttgcggaggaa
aacaatgtacatagctggcgtccatcaaagttgaattgcaaaacatctagtgacagtagt
gcaacactgaaagagtttcggcctaaaagaataaaagagaaagaacaagaaacaatttta
caaaaggaagctgaaaagacaaaggatacacctgctccagctccttcaagtgaaaaaaag
acaggagccaccagcagtaacaatgtgtcgaatactgctacaaataatgctactggaagc
aataagaaaactccatccaagtccttcttcccaaaacttcacgtggtgagctcgcgtaag
aagagttttcaccagttggccatcctttgtcttcttaatcggaccaaagcaggcggcact
gaagacgtgactaatggaaaagatgacgaaatagaagaggaggaagatttggaggaagat
ttagaagaaagtgttactaaggatggagttgtggatgatcttgccaacatagtggaaaca
tctgaaaagtatcgatgcctgttagaaaaggacacagaaatggccgatccaagtgatttc
atctatgcactcaacatgtatggaaaaccgcaacagttggattcacttttggctgctgaa
attcaacatcatgaagcgaggggaaatgtaggacagactggttttatgcactgctggaga
gggtcactggatgaacacattcgttctgctgccagacacaagaagctcacccctttcttg
gtggcatctgcaccacaagtttctataaaattgtgggagttggcgtgtgaagcttatgca
gagcagttattggatgaaggggatgttatcactgctgcatcttatcttgtaaacataaat
aaggtcaaagaagctgtttccatgctactaaagcatcggcactatcgagaagcactagcc
ataaccaagtgtcgtctgagttatgacgaagagatgttggagaaagttacatgtgcttgg
gctgcttctgctatctatgaaggaaattttgatattgcttctatcctacatttgagcatt
ggtcatgtggaagaggctgcacgctgtatgtccaggagaagtgatccagggtcattgttt
gtttcatctaagatatatgagcatgtaggaaatgctgatttggccaactcggttggcttg
ttagccctcaaagaagcgtgtcttaaacacgagcatcataagatcgagcccttcctcgct
cacttgcctaaccttaattggttcaagacagtctcttgctgccaaagtgttatcttggac
ttactacaagaagttggtacacagaaaggaggtcacattaattaccttatgagaagtaga
aaggaacagactaataaagccagtcaagagaccctgattgaagggaacttagtgaatgga
aatgctgatgctgaggagaaaaatggtatttgtgctaatggaaatggtgaggtagtaaca
gagaacgagtgttgtgtatctgaagagtgggttcctctactagagcgaattgaagaggca
tggttagcacaaggcattactcaagatcaatatccccagctctacgaggcagtcaccctc
aacttctccactcagcagatgcccacttcagtcaaacagctttggttcctagtggcagtg
gcattgagtgaatgtctgttaagctcatgccaggagacatgggaccaacatctcactagt
gccttgagctatgttgtatcctggggcaaacctgaccacatccttcacctcacacatgca
ttacttccaaaaggagtaaatgacctaacaacactaggaacggcagtgatagagcaagag
gataaaaataattcgtcaagtgttaatcatttacgtcatctgtactacgctgcagaaata
tctttgttacactcgtaccttaaaacagacgagtcttggtcaaaacttcatgattattct
tcagaaatacaaaatcagatacatgaaactgaaaagttgaaatcagtaactgaaaatgaa
tctgtgtcttctgatggtcaggtcactgtagagtccaagttggcaagtttgacattatca
gcaaatgattcagagagcagtgattcaaagcaagtggagaaagttgagcatgatagaata
tattgccttccccagtccagtgatgaattgattgccattttgaatttttatattgatggc
atgagtccagagtacatgattgccccagaaataatgggactcagctcagggctagcaagc
cctgataaactactactagaaatcattttgaagcttaaggagaaaggtaacgtcaaagaa
caagaaataagaaaccttctgtgtaaagttcctgctaatagaaccagatcttag

DBGET integrated database retrieval system