Procambarus clarkii (red swamp crayfish): 123760084
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Entry
123760084 CDS
T07930
Symbol
Vps16A
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog isoform X1
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla04140
Autophagy - animal
pcla04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
123760084 (Vps16A)
04148 Efferocytosis
123760084 (Vps16A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcla04131
]
123760084 (Vps16A)
Membrane trafficking [BR:
pcla04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
123760084 (Vps16A)
Hops complex
123760084 (Vps16A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
123760084
NCBI-ProteinID:
XP_045601503
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Position
16:11996974..12095817
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AA seq
831 aa
AA seq
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MAFIADWTQLGSDIFYRKHELYKMEWGGGINLGDFLVAAAPYGGPLALTRDETKFTKTQH
AGKPLIFIFSSSGKKISSFKWTSGFLLSLGWSRSEDLVCVQEDGAVLIYDMFGTYQHTFN
LGQEVKDTRIQSAQVFTSHRETGVAILSKSNRIFMVNNIYEPKTRKYPDIPGGVVECWCI
VREERHTNVLVSQGRDLLLLNHIELRPQALYPEWNEAGGCIVEMAVSTNSRHIALLSDCG
KLWIGSSDIRIKYCEYDAKSQVKPKQLAWCGTGAVVLLWDMTLEVVSVNGDATSYYLDST
SHLVQEADGMRVLGSISHDMLQKVPLVVSETLGIGSMAPGALLLEAAKGYQERSTRANDC
LGMIEDSMEEAVNQCLQSAQHEYCSQAQKMLLRAALFGKSFIPEMNPEPCKKTIFTLRVL
NAVRDYRVGLPLTWNQLEHLTLPVLLDRLVYRRFFPLALQIASFLKLPESDGTSRILAHW
ACYKVLQPSQKSDEQIAKEINSKLGYTPGISYTDIANRADQAGRKQLAIKLIEYECRPKE
QVLVLMRLGEDQTALRRALQSGDTDLIYTVLHHLRQKLSSGDFLMLIRNFPVAQSLHIRS
CRELDMEQLRDILVQEDDFYGQGLLRIKEAYQSSRADSRQASLLGAAELFRKAKSEFACQ
MTEEQIKLFKWQMRLEESQHKPYANKSLHDTVHQLVLDGHIKEAEKLRAEFKIPERRYWW
LRVVAHAEAGHWEELANFSKNKKNPIGFEPFVDACLKNTNKIEAQKYAMKVKDENKVTYL
TRCGLLEEAVKVAQEQRSVTGLTEVLAACGSQHQGLQSRIQVLLSEPSIRN
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atggcattcattgccgactggacgcagctcggctccgatatattttacaggaagcatgag
ctctacaaaatggaatggggaggaggcattaatctgggggacttcctagttgctgcagca
ccttatgggggcccattggctcttactcgggacgaaacaaaattcacaaagactcagcat
gccgggaaacctctgatatttatcttcagttcttctggaaagaaaatctcttcctttaaa
tggacaagtggattcctactatcacttgggtggtcacgaagtgaagaccttgtatgtgta
caggaagatggtgcagtgttgatctatgacatgtttggtacttatcaacatacttttaat
ttggggcaggaagtaaaggacacacgtatccagagtgctcaagtcttcactagtcacagg
gagactggtgtagccattttgagtaaatcgaaccgcattttcatggttaataatatatat
gaacctaaaaccagaaaatatccagatatccctggtggtgtagtagagtgctggtgtata
gtgagagaggaacgccataccaatgtgttggttagccaaggtcgtgacctcctcctgctg
aatcacatagagctgcgccctcaggccttgtacccggaatggaatgaggctggtggctgc
attgtggaaatggccgtgtctacaaattctcgtcacattgccctgctgtctgactgtggc
aagttgtggattggttcttcagatatccggattaaatattgtgaatatgatgccaagagt
caagttaagcctaaacaacttgcatggtgtggcacaggtgctgtggtgttgctatgggac
atgacacttgaagtagtgagcgttaatggtgatgctacaagttactacctagattctact
tcacatcttgtacaagaggcagacggaatgagggtattaggtagcattagccatgacatg
ctacagaaagtaccgttagttgtgtcagagactctaggcattggctccatggctccaggt
gctctgcttcttgaagcagccaaaggttatcaggaaagaagtacacgagccaatgactgt
ttgggcatgattgaggactcgatggaagaagcagtcaaccagtgcctacagtctgcacag
catgaatactgttcacaagcccagaagatgctactcagggccgcactctttgggaaaagc
ttcatccctgagatgaacccagaaccctgcaagaaaaccatatttactctaagagttctt
aatgctgtgcgggattacagagtaggactgccactaacttggaatcagcttgagcacctc
acactcccggtgctcttggatcgcttggtgtatcggcggtttttcccattggccctacag
attgccagctttttaaaactgcccgagtctgatggaacttcacgcatactggcacattgg
gcttgttataaggttttgcaaccgtcacagaagagtgatgaacagattgctaaagaaatc
aatagcaaattaggttacacacctggcatatcttacactgatattgctaaccgagctgac
caagctgggaggaagcaactagccattaaattaattgaatatgaatgtcgaccaaaggaa
caagtgctggtgttgatgcgactaggtgaagatcaaacagcactgagaagagcattacag
agtggagacacggatcttatctatacagttctccatcatttgagacaaaagctctcttca
ggagatttcttgatgctcatccggaactttcctgttgcacaatcacttcatattcgcagc
tgtcgagaactcgacatggaacaactgagagatatcttggttcaagaggatgatttttat
gggcaaggcctccttagaatcaaagaggcttaccaatcttcacgggcagattctcgtcaa
gcatcactattaggggcagcagagctctttaggaaagctaaaagtgaatttgcatgtcaa
atgacagaggagcaaataaagttattcaaatggcagatgaggcttgaggagagccaacat
aaaccttacgcaaacaagtccctccatgacaccgtccaccagctggtattggatggacac
ataaaagaggcagaaaaattgagagcagagtttaaaatccctgaaagaagatactggtgg
ctgcgggttgttgctcatgctgaagctggtcattgggaagagttggcaaacttttcaaag
aataagaaaaatcctattggttttgagccatttgtagatgcctgtctgaaaaatacaaac
aaaatcgaggcccaaaaatatgctatgaaggtcaaagatgaaaacaaggtcacatatctt
acaagatgtggactcttggaagaggccgtaaaagtggctcaggagcagcgtagtgtgacg
ggtctaactgaagtgttggctgcctgtggatcccaacaccaaggtttgcagtctcgcatt
caagtgctgcttagtgagccatcaataagaaattaa
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