Procambarus clarkii (red swamp crayfish): 123760141
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Entry
123760141 CDS
T07930
Symbol
Usp39
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 39
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123760141 (Usp39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcla03041
]
123760141 (Usp39)
Spliceosome [BR:
pcla03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
123760141 (Usp39)
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Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
123760141
NCBI-ProteinID:
XP_045601600
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Position
16:complement(37259338..37358874)
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AA seq
498 aa
AA seq
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MATHLDIPLPRVKRKLERDPEDKKDVKKKSRLCPYLDTINRHMLDFDFEKLCSVSLSRIN
VYACLVCGKYFQGRGPNTHAYTHSVSDGHHVYLNLQTLRFYCLPDNYEIIDSSLNDIIFV
VNPTFSREYIAHKVNQSKMSRAYDGTLYLPGIVGLNNIKANDYCNVVLQALSNITPLRNY
FLDPNNYSHIHHAPGTQGLAMFPLINRFGELVRKLWNPRNFKAHVSPHEMLQAVVSCSKK
KFQFTVQGDAIQILSWILNSMHLGLKTPKRKNTIINRCFRGTMNIYSQKILPVEIDEKER
KRLLQSAEYQVKMEESPFLYLTCDLPQPPLFKDEKKENIIPQVSLYLLLSKFDGKTGKEY
QTYKESILKRFQLTGLPPYLILYHKRFTKNTFYIEKNPTIVNFPVKNIDLSEYLTEEVKL
KHPEPIYDLVANIVHDGEPEAGTYRCHILHKGTGKWYELQDLHVKEIEPQMLTLTESYIQ
IYEMQNCIVRSHDIKKVT
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggcgacccacctcgatattccattacccagggtcaagaggaaacttgaaagagatcct
gaagacaaaaaggatgtcaaaaaaaaatcacgtctctgcccatatctggacaccattaat
cgtcacatgcttgattttgattttgagaaactatgcagtgtgtccctgtctagaatcaat
gtctatgcctgtctagtatgtggcaaatatttccagggacgtggccccaatacccatgcc
tacacccacagcgtatcggatggccaccatgtttatctcaatttgcagacacttcggttc
tactgtcttcctgataattatgagatcattgactcctcactaaatgatataatctttgtg
gtgaacccaaccttctcaagagagtacattgctcataaagtgaaccagagcaagatgagt
cgtgcgtatgatggcactttatacttgccaggcatagttggtcttaataatatcaaggcc
aatgactactgcaatgttgttcttcaggctttgtcaaacatcactcctttacgtaactac
ttcctcgaccccaacaactacagtcacatccatcatgcaccaggcactcaagggttggca
atgttcccgctcatcaataggtttggagaactggtgcgcaaactttggaatcccaggaac
ttcaaagctcatgtatctccccatgaaatgcttcaggcagtagtatcatgcagtaagaaa
aagttccagtttacagtccagggtgatgccatacaaattttgtcttggatacttaattca
atgcacttgggcctgaagactcccaaacgaaagaacaccatcatcaatcgctgcttccgt
ggaaccatgaatatctactcacaaaagatcttgccagtggaaatagatgagaaagaaaga
aagcggttattgcagtctgcagaataccaagtgaagatggaggagagcccatttctctac
ctcacctgtgacttgcctcagcctccactattcaaggatgaaaaaaaagaaaacatcata
ccacaggtgagcttgtatctattgcttagcaagtttgatgggaaaacaggaaaggaatat
cagacctacaaagagagcattctcaagagattccagttgacaggacttcccccatatctc
atcttgtatcacaagagattcacaaagaacacattctacattgagaaaaatccgacaatt
gtgaattttccagtgaagaatatcgacttgtcagagtatttaactgaagaggtgaagctg
aaacaccctgaacctatctatgacttggtggctaatattgtacacgatggagagcccgag
gctggcacgtatcgttgtcatattttgcataaggggactgggaagtggtacgagttgcag
gatcttcatgtgaaagagattgagcctcagatgttaactcttactgaatcatacattcag
atatatgaaatgcagaactgtatagtaagatctcatgatatcaagaaggttacctga
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