Procambarus clarkii (red swamp crayfish): 123760326
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Entry
123760326 CDS
T07930
Name
(RefSeq) transcriptional regulator ATRX
KO
K10779
transcriptional regulator ATRX
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcla03000
]
123760326
03036 Chromosome and associated proteins [BR:
pcla03036
]
123760326
Transcription factors [BR:
pcla03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
123760326
Chromosome and associated proteins [BR:
pcla03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
123760326
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ADD_ATRX
DNMT3_ADD_GATA1-like
HTH_Tnp_Tc5
SUS_EPBD
Zn_ribbon_SprT
Motif
Other DBs
NCBI-GeneID:
123760326
NCBI-ProteinID:
XP_045601875
LinkDB
All DBs
Position
39:complement(3848461..3904110)
Genome browser
AA seq
2837 aa
AA seq
DB search
MSSKWFFTSEEYIKLYPTVDTSRMEEDPDGKSQQVAVIMTGQVYRDAGLKYSKHPIVEGL
LYDKLCEIGKHRLRDDVRKMALGIAMSVSDKEFKPTVEWLDNFMRRFCLSKKKMGFHSSA
MLKQKISAKSEETPPPLFRINKLTQEDVLNALGINVEGGGGNDVSVDNNDTTLPVENGKS
KGEVSSGQNGSQVEVNGEQPPEVDPFKDAEPIAEIKIEPEHSLSEKISDGQVTKDANKSS
VTIKEEPKDSTDKVSNSDTNLSTSEKETGNSSIQNGIVVEENLVKKESVDTNLVNEKEGD
LQLQNKNSNNKPIAEKQIRVVAFEKLSNGNDKNLNDSSRSEKTVVEDKDNDDKEKEADSS
NDTANENEEETSNSSESDEDSSQSSDDNEAGSEASDDDDDKDGEAKQKSQEENKIMKTRQ
EEDEIINYSKEEDKYYQKNYDELVKRLSGSVIRCTSCNEQVNHQLRSLVHTHPVLKVFIC
KRCRKYYGKGKYCKDEEGYDEYCRLCAEGGDLLCCEQENCFNGFCKRCVKRTMGRSELKN
AETTENWACYVCDPSPMMELRALHRTILSNLKNSEEQDANLSRNELRTKNMKKKFDVLKK
QRIERALLESPEKKTVKKGSRNAKSTSAKKSKEKVPEDGIQSWLREAIDNMSEMLSLCMK
NVKTIDSKWKENKYSQEATEKAGKRIMKQLHAVRNNFEIMECELENNVKQFTESVSSGSK
ELTEKPDVEAEDCNAQSTSGKDLNTCQESDEIISNSKLCEDKKKEIHKNKKTQKKSTESE
DSDGAGNVEDKSKVEGKMDKGKCSSAKDAKSNKVEDSPMEVDDCQDSSKAALSSDDGHSL
PDLENNIGEMLSDGSNDVGAPEHDVSDEENEDAFDRLKKEPTRRSTRSTRSTREREKLKD
KQPETRQKRKNAQRYSEGNMDDDDLKDDAKSSAEEHNESEGDSKKSRTSRRLRKLKAESN
DEDSIFSEAELKKKSSTKSKKDKASTIDKSESEIDNDDNDDEKLKSSVSQSEKKDSEESE
EEKSGKVEKDVKMKDSKADENDAKKKIKVQKQDEEEEKEEKDEKNVKNLKDDDIDNWKGD
IKELKEEDGKSKRVKEVPNEDDDEDNQDDTKTTKDDLNEDDEKMEEKQGSDDEEDDDRVK
KTKEKKNTEDKEGKHSKKRRRHEERGEKKRGNKHKEDERVLRKRNKPKKEEDKKMERLRR
HQRRGTENKDEDSQECRKSTRKRNKRKTNDEDEDEDVLLGLVEDSSESSVEEDTDEEMRR
READREPVKKKKRKAKKSKKESEREEDGEEEKENGEEEKEDGDEEKEDGDEEKEDGDEEE
EGEKVEKEEDEGKDLDTVKTKNKKKLSKHSKEKDDEEEEQSESEQYYGKSSEAHIEGNKE
KHKKASRKEQSKENQENEKALSTLLASDSGGEGETNGEGQAKKESDEPCKKIVSETSSNS
EESTSEKKKKKIKKKSKDGKPYAKNDNQKAKAALLESESEDDLEDKPKPRCKKKNYKKSL
KKDEVAKKQLKTLRKTLTEEEREELKEKQLKDKCQVDLTELSSSVKDKIKEEDFVYVTDF
PELYLGNRRTFDSDDCDADEEESDKEFTKLMNFKMTKYSKPAPKCKKKFVKSESEQEEEG
EDEEGENDDVDEKENKSNKKVKKEGAVKKKKEGLLDISIDKEDEDEDEEEEDEDENGGDK
NKKKKKEGGISLNEKMKKQILMSSDEEDEEDEQDETLKEDPEEEEKERKKYEEKKRKKEE
EKQQQGSGEESGEEYVPKVYKKGYMNLNISSEDEDGAEDEKAEIESDDENDSDFEESPRK
KRSFQISSSDSEDDKKRKRKKASSSDYNSEDEEDSDKPKAKRKRIKKMTSSSDDDDEDDE
KNKEESPSKHKKIRRVIRDEDLLETTKNATQEEEERRKRIKERQKQYNQIFEIDVESDQK
ELGKLVLDFDPETKAELVSVHEKLVKFLKPHQFKGIKFMWDATIESLEMLKENTGSGCIL
AHCMGLGKTLQVITFVHTLLLSKKTNRHIQRVMVCCPVNTVYNWVSEFSNWLKGKMLPFD
VVELASAKDLWGRAYRLDDWWREGGVCIIGYDMFRNLSNSKCKRYKGKMKEIFQKTLINP
GPDLMVCDEGHILKNEATALSKAITQINTKRRIVLTGTPLQNNLKEYHCMIQFVKPNLLG
TKKEFMNRFVNPIEQGQCVDAMPRDVRRMKRRAHILHNLLEGCVQRFDYTVLKPFLPPKF
EFVISVQLSEIQCKLYQYYLDNLAQGGPKRQGSGLFVDFNCLSRVWTHPKVLELAVRRAL
FNDEEEELDDFICDDTTTSDSSEDERSRKKKKKKEKKKNEESEEEELKVEEFEKPGPIPG
LTESGKVRVDWWKKVIDDNISKDEDEADFLDKLEHSGKLILLLDILRECSSIGDKVLVFS
QSLLALDMIEEFLQLIDEGTLDLPQPEDPLPLPFKQWKKERDYLRLDGSSSADTRKNMCK
VFNNPTNERCRLFLISTRAGGLGINLVAANRVIIFDSSWNPSHDTQSIFRIYRFGQKKPC
YVYRFVAQGTMEEKIYSRQVTKMSTALRVVDEHQIKRYFKMDELAQLYEFTPADADKRDI
PNVPEDRLLAEMLKRHKNWIVDYHEQDSLLENQTSEELTEEERTAAWEDYENEKKGFMVQ
QQRNSVMPVVGNPTMMANASSLPSLSLSSFSFEGVVNTIKAQNPNLTQQEMCESVVLATK
QIQKIHLNHYQRVQGMVYNLKNPMIAPEQRKLLPFGNHPEMLPMLEQQLRMLEENIQREN
QVINHMSQITPQRDQVSMASLMSAGLIRGQPSSAGVSSATANYVTRPATSQIRPVMVPPQ
QKPPEKKPGSNDVIMLD
NT seq
8514 nt
NT seq
+upstream
nt +downstream
nt
atgtctagtaaatggttttttacatctgaagaatatatcaagttatatccaacagtggat
accagtaggatggaggaggatccagacggcaagagccaacaagtggcagttatcatgact
ggccaggtgtaccgagatgctgggctgaagtacagtaaacatcccatagtagaaggactg
ctgtatgacaagctgtgcgaaattggtaaacataggcttagagatgatgttagaaaaatg
gctctaggcatagccatgtcagtgtctgacaaagaatttaaacccaccgtagaatggctt
gacaatttcatgaggcgattctgcctctcaaagaaaaaaatgggtttccacagctcagca
atgttgaagcaaaagatttcagctaaatcagaagagacgccaccacccctctttcggata
aataagcttacacaagaagacgttttaaatgctctgggaataaatgtagagggtggaggt
ggcaatgatgtcagtgtagataacaatgataccacattaccggtggaaaatggaaagtct
aaaggggaagtttctagtggtcagaacggttcacaagttgaagtgaatggagaacaacca
ccagaggttgatccttttaaagacgctgagcctatagctgaaattaagattgaacctgaa
catagtttgagtgagaaaatatcagatggtcaagtcactaaggatgctaataagtctagt
gttacaattaaggaggagcctaaagacagcactgacaaggtttcaaatagtgataccaat
ttatccacctctgaaaaagaaacaggaaattccagtatacaaaatgggatcgtggttgag
gagaacttggtaaagaaggaaagtgttgacacaaatttggttaatgaaaaagaaggtgac
ttacaattacaaaacaagaattcaaataataagccaattgctgaaaaacaaatacgtgta
gtagcatttgaaaaactgagtaatggtaatgacaaaaatcttaatgattcatcaagaagt
gaaaaaactgtagttgaagataaagataatgatgataaagaaaaggaagcagattcatca
aatgatacagctaatgaaaatgaagaggagacatctaactccagtgaaagcgatgaagac
agttcccagtcaagtgatgacaatgaggcaggaagtgaagcatcagatgatgatgatgac
aaagatggagaagcaaaacaaaaatcacaggaggaaaataaaattatgaagaccagacaa
gaggaggatgaaattattaactactcgaaggaggaagacaaatattatcaaaaaaattat
gatgaacttgttaagcgtctcagtgggtcggtaatccggtgcacctcttgcaatgagcaa
gtgaatcaccagttaaggtccttggtccacactcatccggtacttaaagtgtttatatgt
aagagatgccggaaatactatggaaaaggcaaatattgtaaggatgaagaagggtatgat
gaatactgccgattatgtgcagaaggaggtgatctcttgtgctgcgaacaagaaaactgc
ttcaatggcttttgtaagagatgtgtaaagcgtacaatgggacgctcagagctgaagaat
gcagaaacaacagaaaactgggcatgttacgtatgtgatccctctcccatgatggagctc
cgagccctacaccgtaccattctcagcaaccttaagaactcggaggagcaagatgctaac
ctctccaggaatgagctgaggacaaagaacatgaagaaaaaatttgatgtgctgaagaaa
cagcgaatagaaagagctttgctggagtctcctgagaaaaaaactgtaaagaaaggctca
agaaatgcaaaaagtacaagtgcaaagaagagcaaagaaaaagtaccagaagatggcatt
cagagttggctcagggaagccattgataatatgtctgagatgctgtctttgtgcatgaaa
aatgtaaagacaattgactccaaatggaaagaaaataaatattcccaagaagcaacagaa
aaagctgggaagcgcattatgaaacagttacatgctgttcggaataactttgaaataatg
gaatgtgagttggaaaataatgttaaacaatttacagaaagtgtgtcttcaggaagtaaa
gagttgacagaaaagcctgatgtagaagctgaggactgtaatgcacaaagtacatctggt
aaagatttaaatacatgccaagagagtgacgaaataattagtaactcaaaattgtgtgaa
gataagaagaaagaaattcataagaataagaagacccagaaaaagtctactgagagtgaa
gatagtgatggtgcaggtaatgttgaggataaaagtaaagtagaaggcaaaatggataaa
ggcaaatgttccagcgcaaaagatgcaaaatctaacaaagtagaggattcaccaatggaa
gttgatgattgccaagattccagtaaggctgcattgagctctgatgatggtcattcactt
ccagatcttgaaaacaatataggtgaaatgttaagtgatgggagtaatgatgttggtgct
ccagaacatgacgtaagtgatgaagaaaatgaagatgcatttgatagactcaaaaaagaa
cctacgagaagaagtacaagatccacaaggtccaccagagagagggagaaattgaaagat
aaacaaccagagacccgccagaaacgaaagaatgcccagaggtacagcgaagggaatatg
gatgacgatgatctcaaagatgacgctaaatctagtgcagaagaacataacgagagtgaa
ggagattctaaaaaatccagaacttcaaggaggctgaggaagttaaaagcagaatccaat
gatgaggatagtattttttctgaagcagaacttaagaaaaaatcttcaacaaaatccaag
aaggacaaggccagcacaattgataagtctgaaagtgaaattgacaatgatgataatgat
gatgaaaagttgaagagcagtgttagtcaatctgagaaaaaggatagtgaagaaagtgag
gaagaaaagtctgggaaagtggaaaaagatgttaaaatgaaagatagcaaagctgatgaa
aatgatgcaaagaaaaagattaaagttcaaaaacaagatgaggaagaggagaaggaagaa
aaggatgagaaaaatgtgaaaaatcttaaggatgatgacattgataattggaaaggagat
ataaaagaattaaaagaagaagatggtaaaagtaaaagagttaaggaagtaccaaatgaa
gatgatgatgaagataaccaagatgatacaaaaacgacaaaggatgatctaaatgaagat
gatgaaaaaatggaagaaaaacagggaagtgatgatgaggaagatgatgacagggttaag
aaaactaaggaaaagaaaaatacagaagataaggaaggtaaacattccaaaaaaaggcga
cgacacgaagaaaggggtgaaaagaaaagaggtaataaacataaggaagatgagagggtc
ctgaggaaaagaaataagccaaagaaagaagaagataagaaaatggaaagactgagaaga
catcaaagaagaggcacagaaaataaagatgaagattctcaagaatgcagaaaatcaacc
agaaaacgaaacaaaagaaaaaccaatgatgaggacgaggacgaagatgttctcctagga
cttgttgaagatagttcagaaagttcagtagaagaagacaccgatgaagaaatgagaaga
cgagaggcagacagagagcctgttaaaaagaaaaagaggaaagcaaagaaatcaaagaaa
gaatctgaaagggaggaggatggagaagaggagaaggaaaatggagaagaggagaaggaa
gatggagacgaggagaaggaagatggagatgaggagaaggaagatggagacgaggaggag
gaaggtgaaaaggtggagaaggaagaggatgaaggtaaggatctggatacagttaaaact
aagaataaaaaaaaattaagcaaacacagtaaagaaaaagatgatgaagaagaagaacaa
agtgaaagcgaacaatattatggaaagtcttctgaagcgcacatagaaggaaataaagag
aaacataagaaagccagcagaaaggagcaaagcaaagaaaatcaggaaaatgagaaggca
ttatctacattgttagcctctgattctggaggggaaggtgaaacaaatggtgagggtcaa
gctaagaaagaaagtgatgaaccatgcaaaaagattgttagtgaaaccagttctaattca
gaggagagcacatctgaaaagaaaaagaaaaagattaaaaagaaatcaaaagatggcaag
ccatacgcaaagaatgacaaccagaaagcaaaagctgcacttctagagagcgaaagtgaa
gatgatcttgaagacaaaccaaaacctcgctgcaaaaagaagaactataaaaaatctctc
aaaaaagatgaagttgcaaagaagcagttaaaaacacttagaaagacacttactgaggaa
gaaagagaagaactgaaagaaaagcaactgaaggacaagtgtcaggtggaccttacagaa
cttagttcatctgtgaaggacaaaattaaggaagaggattttgtttatgtcacagatttc
ccagagctttacttaggtaatagacgtacatttgacagcgatgactgtgatgctgatgaa
gaagaatctgacaaagagtttacaaagctaatgaatttcaagatgacaaagtactcaaaa
cctgctcccaaatgcaagaagaagtttgtaaaatcagaatccgagcaggaggaggaaggt
gaagatgaggaaggtgaaaatgatgatgtggatgaaaaggaaaataaatcgaataagaaa
gtaaagaaggaaggggctgtaaagaagaaaaaagaaggtttactcgatatcagcattgac
aaagaagatgaggacgaggacgaagaggaggaggacgaggacgaaaatggtggtgataag
aataaaaagaagaaaaaagaaggtggcatttcattaaatgagaaaatgaagaagcagatt
ctgatgagtagtgatgaagaggacgaggaggatgagcaggatgaaacgctgaaagaagat
ccagaggaagaagaaaaggagagaaagaaatatgaagagaaaaagcgaaaaaaagaggag
gagaaacaacagcaaggaagtggagaggaatctggggaggagtatgttccaaaagtatac
aaaaaagggtatatgaatttaaatatatcgtctgaggatgaggatggtgccgaggatgaa
aaggctgaaattgagagtgatgatgaaaacgacagcgactttgaggaatcgcccaggaag
aagagatcattccaaatatcctcttcagacagtgaagatgataagaaaaggaagagaaag
aaggcttcttcttcagattataatagtgaagacgaagaagactctgataaaccaaaggcc
aaacgaaaacggataaagaaaatgacatcgtcgtcagatgatgatgatgaagacgacgag
aaaaataaagaagagtctcctagcaagcataagaagattcgacgtgtgattcgagatgaa
gaccttttggagaccaccaagaatgccacacaggaagaagaagagcgacgtaaacgtatt
aaagaacgccagaagcagtacaaccagatatttgagattgatgtagaatctgatcaaaag
gagttgggtaaattagtcttggactttgacccagaaactaaggcagaacttgtgtctgtt
catgagaagctggttaagttcttaaaacctcatcagttcaaaggaataaagttcatgtgg
gatgcaactattgagagtctagaaatgctgaaagaaaatactggcagtggctgcattctt
gcccattgtatgggtctgggcaaaactctacaagtaatcacctttgtccacacgttgctg
ttaagtaagaagaccaacaggcatattcagagagttatggtgtgctgtccagtcaacact
gtttataactgggtcagtgaattctccaattggctcaaggggaagatgttaccatttgat
gtcgttgagcttgcttcagccaaagatttatggggtcgagcatatcgccttgatgactgg
tggcgggaaggaggcgtgtgcattataggctatgacatgtttcgaaatctctcaaatagc
aaatgcaagcggtataaaggcaagatgaaagagatcttccagaaaacactaataaatcca
ggtccggacttgatggtttgtgatgaaggtcatatactgaaaaatgaggctactgcactc
tcaaaggcaatcactcagattaatacaaaaagacgtattgtgctcactggtactcctctc
caaaataatcttaaggaatatcactgcatgatccagttcgttaaaccaaatcttcttggc
acgaaaaaagaatttatgaatcgtttcgttaatcctattgagcaaggccagtgtgttgat
gccatgcctcgagatgtccggaggatgaagagaagagctcacattcttcataacctatta
gaagggtgtgtacagcgttttgattacacagtcttgaagccattcctgcctccaaagttt
gaatttgttatatcagttcagctgtcagagatccaatgcaagctataccaatattatctg
gataatctggcacaaggtggtcccaaacgtcaaggatcaggcttgtttgtggacttcaat
tgtctctccagagtctggactcaccctaaggtcttagagttggctgtcagaagagcattg
tttaatgatgaagaagaagaattggatgatttcatttgtgatgacacgaccacctctgat
tcttcagaagatgaaagatcaagaaagaaaaagaagaagaaagagaagaagaagaatgag
gagtctgaggaggaagaattaaaagtagaggagtttgaaaaacctggtcccattcctggg
ttaactgagagtggtaaagtgcgtgttgattggtggaaaaaagtaattgatgacaatatt
tccaaagatgaagacgaagctgactttttagacaaactagagcatagtggtaaacttata
cttctgctcgatatcctacgagagtgctcttccattggtgataaagtgctggttttcagt
cagtcgttattggccttggatatgattgaagaattcctgcagttgatagatgaagggaca
ctagacttgccacagcctgaggatcccttacctctaccatttaagcagtggaaaaaagag
cgggattacctgcgtcttgatggctcctcttctgctgacactcgaaagaatatgtgcaaa
gtctttaacaatcccactaatgagagatgtcgtctattcctcatatcaactcgagcagga
ggtctcggcatcaatctagttgctgctaacagagtgattatctttgattcttcctggaat
ccatcccacgacacccagtcaatcttcagaatatatcgctttggacagaaaaagccatgt
tatgtttatcgttttgtggcacaggggacaatggaagagaaaatctactccagacaagta
actaaaatgtcaacagctttacgagtagtggatgaacatcagatcaaacgttatttcaag
atggatgaactggcgcagctgtacgagtttaccccagccgatgctgataagcgcgacata
ccgaatgtgccagaggatcgacttctagctgaaatgctgaaacgacacaagaactggatc
gtagattatcatgaacaggactcgctcttggaaaaccaaacaagtgaagaactaacggaa
gaagagcgtacggcagcttgggaagactacgaaaatgagaagaaaggctttatggttcaa
caacaacgaaacagtgtgatgccggtggtaggcaatcctaccatgatggccaatgccagc
agtttgccatcactctctctatcatcattcagctttgaaggagttgttaacactattaaa
gctcagaaccccaacctaactcaacaagagatgtgtgagagtgtagtgctggcaactaaa
cagattcaaaagattcacctcaaccactatcaacgagttcaaggcatggtttacaatctg
aagaacccaatgattgcaccagagcaaaggaaacttctgccatttgggaaccatcctgaa
atgcttcccatgcttgagcagcagttgagaatgctggaagagaatattcagagagagaac
caagtcattaaccacatgtcacagatcactccacaaagagatcaggtgtctatggctagt
ctgatgtctgctgggctgattcgtggccagccgtctagtgcaggagttagctcggctaca
gctaattacgtgacgaggcctgcaacatcacaaattagaccagttatggtgccgcctcag
caaaaacctccagaaaagaaaccgggatcaaatgatgtcattatgcttgactga
DBGET
integrated database retrieval system
