KEGG   Procambarus clarkii (red swamp crayfish): 123760345
Entry
123760345         CDS       T07930                                 
Symbol
Rad23
Name
(RefSeq) UV excision repair protein RAD23 homolog A isoform X2
  KO
K10839  UV excision repair protein RAD23
Organism
pcla  Procambarus clarkii (red swamp crayfish)
Pathway
pcla03420  Nucleotide excision repair
pcla04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:pcla00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    123760345 (Rad23)
  09124 Replication and repair
   03420 Nucleotide excision repair
    123760345 (Rad23)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:pcla03051]
    123760345 (Rad23)
   03400 DNA repair and recombination proteins [BR:pcla03400]
    123760345 (Rad23)
Proteasome [BR:pcla03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    123760345 (Rad23)
DNA repair and recombination proteins [BR:pcla03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      123760345 (Rad23)
SSDB
Motif
Pfam: XPC-binding UBA ubiquitin UBA_7 Rad60-SLD Crinkler Rad60-SLD_2 Ubiquitin_5 Dsc3_N UBQLN1 SOG2 Secretin_N Creb_binding Ubiquitin_4 Ubiquitin_2 TECR_N Saf4_Yju2
Other DBs
NCBI-GeneID: 123760345
NCBI-ProteinID: XP_045601911
LinkDB
Position
39:complement(3018919..3041709)
AA seq 401 aa
MVVLTLKNLQQQTFTVEIELSATVRALKEKVEKEKGTDYPAVGQKLIYAGKILQDDTTLD
SYNIDDKKFLVIMVTKPKAAAPPPGPADPTVIEEPDVASTQESTETSPSTSTPTTEASSE
AASTSTTATTASSTSTTTTTTSTTTTTTTPPTEASTTPAAAPASQTTSGGSVGSAESLLV
MGEEFNRMVENIMEMGYERSQVERALRASFNNPYTAVQYLVDGIPPNLDEPASNPAAGGE
GEEQVAAEGDPDPDEDPLNFLRSQPQFEQMRQMIRSNPSLLDAFIQQIGQTNPQLLHVIQ
ENQEAFVRMLNEGGSSGGVSTGGSGNQGSGGGSSGGGGSGGVSGRAVPGQNAILVSPQDR
DAIERLKALGNFPEDVVIQAYFACEKNENLAAEFLFSQTWD
NT seq 1206 nt   +upstreamnt  +downstreamnt
atggtggttctaacgcttaagaacttgcaacagcagaccttcaccgtagaaatcgaattg
tccgctacggtcagagccttaaaagagaaagttgagaaagaaaaaggcacagattatcct
gctgttggccagaaacttatttatgcaggtaaaatcctacaagatgatacgacactcgat
tcatataacatcgacgataagaaattccttgtgataatggttacaaaacccaaagcggca
gcaccaccacctggtcctgccgatcccacagtgatagaggagccagatgttgcttctaca
caggaatcgacagaaacttcaccgagtacgagtacacctaccacagaagcatcatctgag
gcagcatctacttccacaacagctaccacagcttcttccacttccaccacaaccacaaca
actagtactaccaccactaccaccactccgcctacagaagcgtcaacaacaccagcagca
gcaccagcctcgcagacaacttcaggggggtctgttggtagtgctgagtccttgctggta
atgggtgaagaatttaaccgtatggtagaaaatataatggaaatgggctacgagaggtcg
caggttgaacgagcgcttagggcaagcttcaataacccctacacggctgtccagtaccta
gttgatggcatccctcctaacttagatgagccagcgagcaacccagcagcgggaggtgaa
ggtgaagaacaagttgctgctgagggtgatcctgatcctgatgaggatcctcttaacttc
cttcgatcacaaccacagtttgagcaaatgcggcagatgattaggtcaaatccgtcactt
ctggatgcatttattcaacaaattggtcaaacgaatccccagttactgcacgttatccag
gaaaaccaagaggcgtttgttcgaatgctgaatgaaggtggcagctcaggaggtgtgagc
acaggaggtagtggtaaccagggtagtggaggtggcagcagcggcggcggtggtagtggt
ggtgttagtggccgtgctgttcctggtcagaatgccatccttgtttcccctcaagataga
gatgctattgaaaggctcaaggcactgggaaactttccagaggatgttgttattcaagct
tattttgcctgcgagaagaacgaaaatttagctgccgaatttctcttcagtcagacctgg
gattag

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