| Entry |
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| Name |
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| KO |
| K14318 | nuclear pore complex protein Nup88 |
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| Organism |
pcla Procambarus clarkii (red swamp crayfish)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:pcla00001]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123760382
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:pcla03019]
123760382
Messenger RNA biogenesis [BR:pcla03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
123760382
|
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
39:243309..273098
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| AA seq |
711 aa
MAGGGGQTLALSHYLSHSHTHQHFTKSSQYSLLDLVDDVIVAWSREDGCLLSQLLTPTNS
KVQKLALSKPPVWEVEHIKINKSGSDVALIGHRGVAIVELPHRSGTPPLYDGGRNTITCR
VEYVAERFFSCHPKLEVVAAAWHPGSLENNHIVILASDNYLRIYNLSTNEIPEQAISVGS
GRAGVISSSSFTCSSNLGESAVSFDFGLPSEPVKCLSGNPVSNGVIENLIDPENVKRQTY
LGLQWPVFILYGNGEVYFTITILGSNRPPMHRLYGPLSMTPSCDSNYGLDSCSLLVLQSS
PPVLVIATTAGQLHHCIVIDSDINNEGELPPEDSINKFGAKFTPTTVKLHVYETIELQLS
LLQDDEHFTSLLSLHPDPTTPTRYWVSHDAGVHGITVPLIEHLLQYTDLPDDAAFSVSEA
PCIVDHLLCTRSLTAAGPMPVVGLVANPSHTLYVLLASGRIIHINLQAAYVPKVVQLPNA
DYDLAVSPLRKVHTENFEDHIRCVMQRLSSQPLLVSGSNSKVTPGEYLNLLNRITATLRK
NYMQPQRAARIDIQRRSDILNEQKQRLQAEVDDLQVRKKSLTEKAHELAEKYEEASDKKK
QLVERLERVLSLVMRALPVLSTGEKNMMQELESMQNHTSTLMNQLAQIKAKDKWQNSQME
KILNTEAEKNHRVACVSEQQLKVLKQALTNEDEKLSSLLERVKQVKHDLQL |
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| NT seq |
2136 nt +upstreamnt +downstreamnt
atggcgggtggtggcgggcagacactggcgctctctcactacctctctcactcacacact
catcaacacttcactaagtcttcacagtattcactcctagatcttgttgatgatgttatt
gtggcctggagcagggaagatggctgtcttctttctcagctactaactccaaccaattct
aaagtccagaaattagctctatccaagccaccagtttgggaggtggaacatataaaaata
aacaaaagtgggagtgatgttgccttgattggccaccgaggtgttgccatcgttgagttg
cctcatcgttctggcactcctccactgtatgatggagggagaaacacaataacgtgcagg
gtggagtacgtggccgagcgattcttctcatgtcatcctaaactggaggtggtggctgct
gcatggcatccagggtctctggagaacaaccacatagttatccttgcctcggataattac
ctgcgaatatacaacttatcaacaaatgaaattccagagcaagcaatatctgttggatca
ggaagagcaggtgttattagtagttccagtttcacttgtagttctaatctaggagaaagt
gcagtttcatttgatttcggtcttccaagtgaacccgtaaaatgcctgtctgggaatcct
gtctccaatggagtgatcgaaaatttgattgacccagagaatgtgaagaggcaaacatat
ttaggcctgcagtggccagtgtttatactgtatggcaacggagaagtctacttcacaatt
acaatcctcggctcaaacagaccacccatgcatagactgtatggccccctgagtatgact
ccatcatgtgacagcaactatgggctggactcgtgtagtcttctcgtactgcaatcctca
cctccggtgcttgttattgctaccacggctgggcagcttcaccactgcattgtcattgac
agtgacataaacaatgaaggggaattacctcctgaagacagtatcaacaagtttggagcc
aagtttactccaacgacagtcaaactacacgtgtacgagactatagagctgcagttatct
cttctccaagatgatgaacatttcacttcgctcctctctctccatccagaccctaccaca
cccactcggtactgggtgagtcacgacgcaggtgtccatggcattactgttccgttgatt
gagcatctccttcagtacactgacttgcctgatgatgcagctttttcagtaagtgaagct
ccgtgtattgtggatcatttactttgtacaagatcactcactgcagctggtccgatgccc
gtggtgggcttagtcgctaatccttcccatactctctatgttctgctggcttctggcagg
atcattcacattaatctacaggcagcttatgtacctaaagttgtccaactcccaaatgct
gattatgatcttgctgtgtccccacttagaaaggtccacacggagaactttgaggatcac
attagatgtgttatgcaacgtttgtcgtctcagccgctgttggtctctggttcaaactca
aaagtaacccctggagagtacctgaatcttctcaatcgtataacagcaactcttaggaag
aactacatgcaacctcagcgagctgctagaatagacatacagagaaggtcagacatactt
aacgaacagaagcaaagattacaagctgaagtagatgacttgcaagtgagaaagaaatcg
ttaacagagaaagcccatgaattggcagaaaagtatgaagaagccagtgataagaagaaa
caattagttgagagattagagagggtattgagcctagtgatgagagcattacctgtacta
tccacgggagagaagaacatgatgcaggagttagagtccatgcagaaccacacctccacg
ttaatgaaccagttagcacaaattaaggcaaaggacaaatggcaaaatagtcagatggaa
aaaattctgaatacagaagctgaaaaaaaccaccgggtggcatgtgtgtcggaacagcag
ctcaaggtcctcaaacaggccttgaccaatgaggatgagaagttgtcaagtctactggag
cgagtgaaacaagttaagcacgacctgcagttatga |
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