Procambarus clarkii (red swamp crayfish): 123760891
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Entry
123760891 CDS
T07930
Symbol
Prp40
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123760891 (Prp40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcla03041
]
123760891 (Prp40)
Spliceosome [BR:
pcla03041
]
Complex A
U1 snRNP components
U1 related factors
123760891 (Prp40)
Complex B
123760891 (Prp40)
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Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
RhoGAP-FF1
DTW
WW_2
Motif
Other DBs
NCBI-GeneID:
123760891
NCBI-ProteinID:
XP_045602650
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Position
3:18763588..18972665
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AA seq
883 aa
AA seq
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MSGGGPPGGNGPSSYSAPPLGYRMPPPGPTMPRLPPPSFMPPGAPPGLPPPAFTVPPPGF
MSSFGQAPAGEGSGAVISAGPQLNTPPASNSPAAVQVLSPATTPGPATSASASPASIAMP
GTPSPALPNTTPTTIATTKPEASSPTKDKKSVWTEHKAPDGRIYFYNTVTRQSSWEKPDE
LKTPAELLLSQCPWKEYKSESGKIYYHNVNTKESRWTVPKELEDLKTKISSEENTSAPKN
NTVAAPDKKATSAALDQAMAATLAAIQVPTADKVPEKKPSPSEKEEPVKPIVPVEVVKEV
AEPKLLVFKDKKEALEAFKEFLRDKGVPSDATWDKAVRMIQNDARYEAFNKLNEKKQAFN
AYKVQRAKEEKEEQRLRAKKAKEDLEQFLLSSERMSSSIKYYRCHEMFQHLELWKCVPES
ERREVYEDVVFNLAKKEKEENKAMRKRNMKVLSEILDSMTNITFKTTWSEAQQMLIDNPT
FAEDTDLLSMDKEDALIVFAEHIKQLEEEEEEERERQKRRIKRQQRKCRDNYIALLDELH
EQGKLTSMSLWVELYPMISADIRFTAMLGQPGSTPLDLFKFYVADLKSRFHDEKKIIKEI
LKEKSFEVQVKTSFKEFATVVCDDPRSATLDAGNVKLTYNALIEKAEAREKERQKEEARK
MRRLEAGLRAAFKSIGVDSGSTWEDVRPRVQHLSSFTAVTIEAERIRIFKEYQQHLEEAC
GHHHSRNKKKSKKKDRKKSRSRSHSYSSDSDDGHHKRRSRRSRSRSKSYSDDSDDERRRS
RKKKSKKKKGRSRSRSVSSEDSYRSRRSSKKKKHRSRSRSRSRSRGGSHRSTHTRSKGHS
EGDSARKSSEREAGEVSLEEGELSEDELEKKREQLMKELENIN
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgagtggaggagggccaccaggtggcaatggtccttccagttacagtgcacctccgttg
ggttacagaatgccacccccaggccctactatgcctcgtctcccaccaccaagtttcatg
cccccaggagctccgcccggcctcccaccaccagcattcactgtcccaccacctggattt
atgagctcttttggtcaggctcctgcaggtgagggtagtggggctgtgatctctgctggc
cctcagctaaatacccctccagccagtaattctcctgctgctgtccaagtactgtctcca
gcaactactccaggtcctgctacttctgcaagtgcctcacctgcaagtatagccatgcct
gggacaccttctcctgccctccctaacaccactccgaccactattgcaaccactaaaccc
gaggccagttcacctacgaaggacaagaaaagtgtgtggacagagcacaaggccccagat
ggaagaatatatttttacaatacagtcacacgacagtcatcatgggagaagccagatgaa
ttgaagacacctgctgagttgctactctcccagtgtccatggaaagaatacaagtcagaa
agtggaaagatttattaccacaatgtaaatacaaaggagtcacgttggacagttccaaag
gagctggaggatctgaaaacaaaaatttcttcagaagaaaatacgagtgcccctaagaac
aatactgttgcagcaccagacaaaaaggcaacctctgctgctcttgaccaagctatggct
gctactcttgctgccattcaagttcctactgcagataaagtccctgagaagaagccgagc
ccgtcggagaaagaagaacctgttaagcccatagttccagttgaagtagtgaaggaggta
gcagagccaaaactgctagtgtttaaggacaagaaagaagcactagaagccttcaaagaa
tttctcagagacaagggtgtgcctagtgacgctacttgggacaaggctgttcgtatgata
cagaatgatgcacgctacgaagcctttaacaaactgaatgagaagaaacaagccttcaat
gcttataaagtccagcgtgccaaggaagagaaggaggagcagcgactacgagccaagaaa
gccaaggaggacctggaacagtttttgttaagcagtgaacgaatgagctcttctatcaag
tactacagatgccatgagatgttccagcacttagagttgtggaagtgtgtgcccgagtcc
gagcgacgtgaagtgtacgaggacgtggtgttcaatctggccaagaaagaaaaggaagag
aataaagcaatgcggaagaggaacatgaaggtattgagtgagatattagacagtatgaca
aatatcacctttaaaactacatggtcagaggcgcaacagatgctcatagacaacccaaca
tttgctgaagacacagatctgcttagcatggataaggaggatgccttgattgtgtttgct
gagcacatcaagcaactggaggaggaagaggaggaggagcgtgagaggcagaagaggagg
atcaagcgacaacagaggaagtgccgtgataactatatagcactcttggacgagttgcac
gagcagggcaaactcacctccatgtctttgtgggttgaactctatcccatgatctctgca
gatattaggttcacagccatgctcggtcaaccggggtcaacacctcttgacctgtttaag
ttttatgtggcagatctcaagtcccgattccatgatgaaaagaaaatcatcaaggagatc
ttgaaagaaaaatcatttgaagttcaggtgaagacgagcttcaaggaatttgcgacggtt
gtgtgtgacgatcctcgctcagccacgctggatgctggcaacgtcaagctcacttacaat
gctctcattgagaaggcagaagcaagggaaaaggagaggcagaaggaggaggctcgtaag
atgcgtcgtttggaagcaggtttacgggcagcatttaaatcaattggcgttgactccggc
tctacttgggaagatgtgcgtcctcgggtgcagcatctctcatcattcactgctgttact
attgaggcagagcgcatcaggattttcaaggaatatcaacagcacctggaggaggcgtgt
ggtcatcatcactctcgcaacaaaaagaaaagcaagaaaaaagataggaaaaagtctcga
tcacgttcccactcttactcgtctgacagtgatgatggtcaccacaagcgtagatcgcgg
cgttcacgttcccgctccaaaagttattccgatgattccgatgatgaacgtcgcaggtct
cgcaaaaagaaaagcaaaaagaagaagggtcgcagtcgctcgcggtctgtcagcagtgaa
gattcatacagatcaaggcgctccagtaagaaaaagaagcatcgttctcgctcccgttct
cgctctagatcacgtggcggatcacacagaagtactcacacaagatccaaaggccattct
gaaggtgactcagcacggaaatcctcagaacgtgaggctggcgaggtcagcttagaggag
ggcgaactgagtgaagacgagttggaaaagaagagggagcagctgatgaaagaacttgaa
aatattaactaa
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