| Entry |
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| Symbol |
Chd1
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| Name |
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
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| KO |
| K20091 | chromodomain-helicase-DNA-binding protein 2 [EC:5.6.2.-] |
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| Organism |
pcla Procambarus clarkii (red swamp crayfish)
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| Brite |
KEGG Orthology (KO) [BR:pcla00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:pcla03036]
123761044 (Chd1)
Chromosome and associated proteins [BR:pcla03036]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
123761044 (Chd1)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
41:complement(13093360..13142222)
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| AA seq |
1819 aa
MREHVEDSGSDSEEEQSGSGSGVDNDNDSDNNENESKSGGGSDSESGSGSGSGSGSGSSS
DSSDNNNNSDSDSDNKQSGSDDDDEEEEDKDDNDDEDKSDDQDEDENDRSGSSSSSGRGN
SRKGSKEELKPSSLQCWEENPDIYGIRRSARERKEPDRMKVEHQETAKKYRKRKSSSQWN
SSEQSDSDNSDYDSPKHKRKPPSKKSSSSSSKKKSHKKHKSSSEGSESEGGTKRRGSNRA
AKEVSYKEAESEDEEEDEEDLIEVDWSQTISKEEENAHTIEKVLDHRIGKKGGMGSMLVP
HTPALASPVGMPTYIYEVEKNGDPNSDFNPNNPEEVENQYLVKWKGWAHLHNTWESEESL
KTQKIKGMKKLENYLRKEEEMDLWRKQASPEEVEYMEIQSELEKELYQSHIRAERIFAEA
QENGNTYYYVKWENLPYAEATWELEDLCNTRFSEQLKQFKEREKSTCTPKQCSALKHRPK
FAPMKVQPDYLGGENEDLELRDYQMEGVNWLIHAWCKHNSAILADEMGLGKTIQTIAFLS
YLFHTHHMYGPFILILPLSTLNAWQKEFATWAPDMNVIVYIGDRDSRRIVTEFEWTHSSK
RIKFNAVLTTYEILLRDKEYLRDSCHWACLVVDEAHRLKNEESQLYQALKEFRTNHRLLI
TGTPLQNSLKELWALLHFIMPEKFDDWEYFESQHDGDNMKKGFHRLHRQLEPFLLRRVKK
DVEKSLPSKVEQILRVDMMQQQKQYYKWILTKNYEMLKKGNRGPTSSFVNIVMELKKCCN
HCFLTKTTEEFNSSDILQQLLRGSGKLMLLDKLLVRLRETGHRVLIFSQMVRMLDILAQY
LQYRRFPFQRLDGSIKGEVRRQALDHFNAEGSNDFCFLLSTRAGGLGINLATADTVIIFD
SDWNPQNDLQAQARAHRIGQKNQVNIYRLVTKNSIEENIIERAKQKMVLDHLVIQSMDTS
GRTVFNKKLTSSNSTPFNREELNAILKFGAEELFKDDEDNEEEPVCDIDEILKRAETRED
APSMVGEELLSAFKVASFTLDEDEEVSKMDSIADENTKDWDEIIPEDFRTKVEEEERQKE
MADLYLPPRKRKTVNQAGQKEDEKYPRSKKKKEETESSNDDTDDDRPKKRGRPRMHHKET
IKGFTDVEVRRFFKSFKKFSNPLRRLDTIAHDADLREKPMNDLRKLGETIVERCEESMKE
HESQKENEKTPDVNGEGQPKQRRDRGPSFKLSGVAINAKTTLTTLEELAPLDNVVPHAPV
ERASWTLQIKRVKDAHWDVPWGIADDSRLLCGIYEFGMGSWALIKADPALNLGDKILLPG
DHKPQGKHLESRAQYLLKLIKKHMGLIPVKPNIRKPIKPRKIIKEPKGISKAIIENDDSS
DDGLTNSSHGTSSNQKKTSKETKEHKDSKPKSKDSKEEKEDGDKAKVKEETDSKDAEKAK
KKKEKKEKKEKKEKEKKAGPVHITANGEPVPLDETKELDKTHPLWDECKEKMRPMKKALK
TLDNPNESLNQEEQIQHTRRCLVQIGDHIERCLESLKDPDSVREWKSLLWQFVSKFTEYD
ARKLHKLYKKNRKIQEDKKEGEKDKDDKDKKDEKKEKKDKDHEKKKDKESRDKHHSQKRK
PEESGNHSPSKKPYNGWAQRGREGEKWGDRDKSRDREREKDRGDRDRQRERDRDRDRYYR
NHAVPGRDWHGNPGGRDFKERYPQDYNKREGGGSYHREGYKPHGYHRGGAEWGARPHHPK
HPYGPPGGYGPPYYPQHPSGPGMYGGPPQAGQMPHRPPPFNAHRPDWVQKERMDRPDRPQ
QEWGKERQDRPPAYQKDFS |
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| NT seq |
5460 nt +upstreamnt +downstreamnt
atgagggagcatgtagaagacagtggctcagacagtgaagaggagcagtctgggtcaggt
agcggagtagataacgacaatgactcggacaacaatgaaaatgaaagcaagtctggtggt
ggaagtgactcagaatctggatctggcagtggaagtggatctggttctggaagttcatca
gactcatcagacaacaacaacaattctgattcagattctgacaataaacagtctggatcg
gatgatgatgatgaggaggaggaagataaagatgacaatgatgatgaggataagtctgat
gaccaagatgaagatgagaatgatcgatcaggaagctcgtctagcagtggacgaggaaat
tctaggaagggaagcaaggaggaattgaagccgagttctttgcagtgttgggaggagaat
cctgacatctatgggatacgtcgctcggcgagagaacgtaaggagcctgatcgtatgaaa
gtggaacaccaagaaacggctaaaaaatatagaaaaagaaagagctccagtcagtggaac
agttctgagcaatcagatagtgataattctgattatgattcgcccaaacataaaagaaag
cctccgagcaaaaaatcaagttcatcttcctctaagaagaaatcgcataaaaagcataaa
agtagcagtgaaggtagtgagagtgaaggtgggaccaaaagacgagggtcaaatcgtgct
gccaaagaagtgagttataaggaagcagaaagtgaagatgaagaggaagatgaagaagat
ttgatagaagtagactggtcgcaaacaatatccaaggaagaagaaaatgcacacactata
gagaaagtgttagaccataggattgggaaaaaaggaggaatgggttccatgctggtacca
cacactccagcactggcctcacctgtggggatgccgacctacatctatgaagttgagaaa
aatggtgatcccaattcagattttaaccccaataatcctgaagaagttgaaaatcagtat
ttagtgaaatggaaagggtgggctcatcttcacaacacctgggaatcagaagagtcgctg
aagacccagaagatcaaaggtatgaaaaagttggagaactatctgcggaaagaggaggag
atggatttgtggcgaaaacaagcatcaccagaagaagtagaatatatggagatccagtct
gaattagagaaggaattatatcagtcacatatcagagcagaaagaatatttgccgaggct
caggagaatggcaacacctactactatgtgaagtgggagaatcttccatatgctgaagct
acgtgggaattggaagatctttgtaatacaagatttagtgaacaattaaaacaatttaaa
gaacgggaaaaatccacttgcactccgaagcagtgttcagcattgaaacatagaccaaag
tttgctccaatgaaggtgcagccagactacttaggtggtgaaaatgaggacctagagttg
agagactaccagatggaaggtgttaattggctgattcatgcatggtgtaaacataattct
gctattctggcagacgaaatgggtcttgggaagacaatccagacaattgcatttttaagt
tacctgttccatacacaccacatgtatggtcctttcatccttatcctgccattgtctacg
ctgaatgcttggcaaaaagaatttgcaacatgggcaccagacatgaatgtcattgtttat
attggtgacagagattctagaagaattgttacagaatttgaatggactcattcaagtaaa
cgaatcaagtttaatgccgtccttacaacttacgagattcttttacgtgacaaagaatac
ctgcgagactcgtgccattgggcatgtctagtagtagatgaagcgcatagattaaaaaat
gaagagtcgcagctatatcaagccttgaaggaattccgcaccaatcatcgtctgcttatt
acgggtacccctcttcagaactcactcaaggaactatgggctctcctccatttcatcatg
cctgaaaagtttgacgattgggaatactttgaatcacaacacgatggggataatatgaag
aaaggttttcaccgtctccatcgtcagcttgagcctttcttactgcgcagagttaagaaa
gacgttgaaaaatccctgccatccaaggttgagcagattttacgtgtggatatgatgcag
caacagaaacaatattataaatggattctaaccaaaaattatgaaatgttgaaaaaaggc
aataggggaccgacgtcaagttttgttaatattgtgatggaactgaagaagtgctgtaat
cactgttttttgactaaaaccacagaggaattcaacagttcagacatattacagcaatta
ttaagaggtagtggcaaattgatgctgctagacaaacttctggtacgacttcgagagacc
ggccaccgagttcttattttctcccagatggtgcgcatgctggatatattggcccagtac
ctacagtaccgccgctttcctttccaaaggttggatggctctattaagggtgaagtacga
aggcaagctcttgaccacttcaatgccgaaggctcgaatgacttctgcttcttgctgtct
actcgagctggtggtctgggcatcaatcttgctaccgctgacactgtaattatcttcgac
tcggactggaacccacagaatgaccttcaagctcaagccagagctcatcgcattggccaa
aaaaatcaagtgaatatataccgtctagtcacaaagaacagtattgaagagaacatcata
gaacgagccaagcagaagatggttttggatcatctcgtcattcagtccatggacacttcc
ggccgtactgtctttaacaaaaagttgacaagttcaaattcaaccccatttaatcgtgag
gagttaaatgcaatccttaagtttggtgctgaggagctctttaaagatgatgaagataat
gaagaggaacctgtgtgtgatatagatgaaatcctgaaaagagctgaaactagggaagat
gcaccatctatggttggggaagaactgctctccgcttttaaggtggcctcattcactcta
gatgaagatgaagaagtatctaagatggattctatagcagatgaaaataccaaagactgg
gatgaaattatcccggaagatttcagaacaaaagtagaagaggaagagcgtcaaaaggag
atggcagatttatatctaccgccaaggaaacgaaaaactgtgaatcaagcggggcagaag
gaagatgaaaaatatccacgttccaagaaaaagaaggaagaaacagagtccagcaacgat
gatactgatgatgatcgacccaagaaacggggtcgtcctcgcatgcaccataaggaaact
atcaaaggctttactgatgtggaggtccgaagatttttcaagagttttaagaagttcagc
aaccccttgcgccgcctagataccattgctcacgatgctgacctcagagaaaagcctatg
aatgacttgcgtaaattgggtgaaactattgttgaacgttgtgaggaatccatgaaggaa
catgagagccagaaagaaaatgaaaagacccctgacgtgaacggggaaggtcaacctaaa
caacgacgggatagaggaccatcttttaagttgtctggagttgctattaatgccaaaaca
actctcacaactttggaggaattagctccacttgacaatgttgttcctcatgctcccgtg
gagagagcttcatggacattacaaatcaagagagtgaaagatgctcattgggatgttcct
tggggcatagctgatgactcaagattgctttgtggcatctatgagtttggaatgggttca
tgggcgctgattaaggctgatccagctcttaacttgggagacaaaatactcctacctggt
gaccataaaccacagggaaaacatttagaaagcagagcacaatatcttcttaaactcatc
aagaaacacatgggtctaatacctgttaagccaaatattcgcaaaccaataaaaccacga
aagattattaaagaaccaaagggaatttcgaaagccataatagaaaatgatgatagttct
gacgatgggctgacaaactcctctcatggaactagctcaaaccagaagaagacatctaag
gaaacaaaagaacacaaggattccaagccaaaatctaaagattcaaaagaggagaaagaa
gatggagataaagctaaagttaaagaagaaacagacagcaaagatgcagaaaaagcaaag
aaaaagaaagagaagaaagagaagaaggagaaaaaggagaaagagaagaaagctggacct
gtgcacataacagcaaatggagaacctgttcctttagatgaaacaaaggagttggacaaa
actcaccctctgtgggatgagtgcaaagagaagatgagacccatgaagaaagctttgaaa
actcttgacaatcccaatgagagtttaaaccaagaagaacaaattcaacacacaagacgc
tgtttagtgcaaattggagaccatatcgaacgttgccttgaatctttgaaggatccagac
tctgtgcgtgagtggaaaagtctgttgtggcagtttgtctccaagtttacggaatatgat
gcaagaaaacttcataaactgtacaaaaaaaatagaaagatacaagaagataagaaagaa
ggagagaaggataaagatgataaggataaaaaagacgaaaagaaagaaaagaaggataag
gaccacgaaaagaagaaagataaggagagcagagacaagcaccattcccagaagagaaaa
ccggaagaaagtggcaaccacagcccatctaagaagccttataacgggtgggcacagagg
ggccgagaaggcgagaagtggggtgatagagacaagagccgagatcgtgaaagagagaaa
gatcgtggtgatagagacaggcagagggagagagatcgtgatagagatcgctactaccgc
aatcatgctgtgcctggccgagactggcacggaaatcctgggggaagggatttcaaggaa
agatatcctcaagattacaataagagagaaggcgggggaagttatcatcgtgaaggttat
aaacctcatggataccacagaggtggagctgaatggggtgcacgacctcatcatcctaaa
cacccttatgggcctccaggtggatatggtcctccctattatcctcaacatccatcaggc
ccaggtatgtatgggggcccgccccaagcaggccaaatgccacacagacctccaccattc
aatgctcaccgtccagattgggttcagaaggaaagaatggacagacccgacagacctcaa
caagaatggggaaaagaacgtcaagaccgacctccggcatatcaaaaagatttctcttaa |
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