Procambarus clarkii (red swamp crayfish): 123761305
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Entry
123761305 CDS
T07930
Symbol
U4-U6-60K
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123761305 (U4-U6-60K)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcla03041
]
123761305 (U4-U6-60K)
Spliceosome [BR:
pcla03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
123761305 (U4-U6-60K)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
WDR55
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
PRP4
ANAPC4_WD40
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Ge1_WD40
Beta-prop_WDR19_1st
Beta-prop_SCAP
Beta-prop_DCAF12
Nbas_N
Beta-prop_SPT8
WD40_like
Motif
Other DBs
NCBI-GeneID:
123761305
NCBI-ProteinID:
XP_045603198
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All DBs
Position
7:8537676..8541299
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AA seq
507 aa
AA seq
DB search
MSDGEDSPVAVGGGGVSERQWYVPNLDSTVSGDSPPDSPESANASNIHTSNEYMELDEPE
MLDEKKALLEEFERKRRARMIHVTTDDSEVKQQLRQLGEPICLFGEGPADRRNRLKELLS
RLGEDALKKTAAGQQETDTPELDQQRPEETWYHEGPQPLKEARMFIVNYSIPRARARLKK
EHLDYEVPEATRTARRQEVQNKLRSFGLLGSQNADTRPVCYCSFSPDGKLLATSSWSGLV
KLWQVHNCLEEQTFRGHNCYVDCVEWHPSATLSMEPAGLNLVSSGRDGTVQLWSLNSEEP
LGELPPLEARVSRVRFHPSGRFLGACVHDNSWRLWDLEIREEVLFQEGHSKPVYCLAFQN
DGSLGATGGMDASGRIWDLRTGRCVMFLSGHQNPVLAIDWSPDGYHLVTGSEDNTARVWD
VRQRRCIYIIPAHTGIVTGARYDRIGGQYIVTCSYDGSVRLWCHGSFQAMRALEGHGQKV
MGVDVSPTDGIIATCSFDRTFKIWGPD
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatggagaagattctcctgtggccgtgggaggaggaggggttagtgagcgtcag
tggtatgtaccaaatttggacagcactgtgtctggtgactccccaccagattctcctgaa
tcagcaaatgcatcaaacattcataccagtaatgaatatatggagttggatgaaccagag
atgttggatgagaaaaaagcacttctggaggagtttgagcgtaaacggcgagctcgaatg
attcacgtaacaacagatgacagtgaggtaaagcaacaattgagacaactgggtgaacca
atctgcttgtttggtgaaggccctgctgaccggagaaaccgcctgaaagaacttttgtct
cgacttggtgaagatgccctaaaaaagacagcggctgggcaacaagaaactgacacacca
gaacttgaccaacagcgaccagaagagacatggtatcatgagggtccacagccattgaag
gaagcacggatgtttattgttaattattctattcctcgtgctagggcaagattgaaaaag
gagcatttagattatgaggttccagaagcaactcgcactgctaggagacaggaagttcaa
aacaaactgcgatcatttggtcttctaggaagtcaaaatgctgacacacgaccagtttgt
tactgtagttttagtccagatggaaaacttttagcaaccagttcatggagtggtctggtc
aagttatggcaagtgcataactgcttagaagagcaaacttttcggggccacaattgttat
gttgattgtgttgaatggcaccctagtgccaccttatccatggaaccagcaggtctgaat
ttagtgtcaagtggacgtgatggaactgttcagctttggagtttaaatagtgaggaacct
cttggagagcttccacctcttgaggcacgagtatctcgagtacgctttcatcctagtggg
aggttccttggggcatgtgtgcatgataacagctggagattgtgggacctagaaattcga
gaagaggtccttttccaagagggacattcaaaacctgtttattgcttagcttttcaaaat
gatggatctttgggtgcaactggtggcatggatgcttctggacgtatatgggatcttagg
acagggagatgtgtcatgttcctcagtggacatcagaacccagtgttagccattgattgg
tcacctgatggctatcacttggtaacaggaagtgaggacaacacagcaagggtttgggat
gtgaggcaacgtcgatgtatatatattattcctgctcatactggtattgttactggtgct
cgttatgataggattggaggtcaatacattgttacatgctcatatgatggatcggttcgt
ctttggtgtcatggatctttccaggctatgcgtgctcttgaaggacatgggcaaaaggtc
atgggtgtagatgtttcgccaacagatggcattattgcaacttgctcctttgatcgtact
ttcaaaatttggggaccagattag
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