Procambarus clarkii (red swamp crayfish): 123761323
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Entry
123761323 CDS
T07930
Symbol
Syx18
Name
(RefSeq) syntaxin-18 isoform X1
KO
K08492
syntaxin 18
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla04130
SNARE interactions in vesicular transport
pcla04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
123761323 (Syx18)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
123761323 (Syx18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcla04131
]
123761323 (Syx18)
Membrane trafficking [BR:
pcla04131
]
SNARE
Syntaxin (Qa)
Stx-rER
123761323 (Syx18)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin-18_N
SNARE
Motif
Other DBs
NCBI-GeneID:
123761323
NCBI-ProteinID:
XP_045603232
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Position
7:complement(7789678..7798062)
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AA seq
411 aa
AA seq
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MGVIRKFIDLHFTFQFELWAGEGSGIGLDERHQGMTVETAASLDLTTLFKSCVKTIRTRN
KAMGVALPQTKIFPPAPTHSSQFYSRARDVMSNIASHRNLLKDHKKKYLQDQDQTMSDYE
RSFMEKVVTTNLRIIDDNIHSLNIELQGEKLGSKDARECQENILAILRLKFQETNSTFKH
MKEQRRKKEKEKDNLFRVQRPVGSKKQPSSGSDDSHRTPQLAQLGRKELSQDTCKGSHPE
SWSHSTDSQSTDHFNGESLEHNGKKEVQTTENKTVGNGTTDLEKTRSSTSLFEEEMERMS
GDLSAEERQMLEEENAHLYKEVMSNHEEVRQITRQVVELSQMQDLFSENVDLQAHQIEEN
QETIMASTENVRSGNEQVREAMRKDAGFRVWIMFFLIVMSCTILFLDWYNG
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgggagtcattaggaagtttatagatttgcacttcactttccaatttgagctatgggcg
ggggaaggatctggcattggcttggacgagaggcaccaagggatgacggtggagacagca
gctagcttggatctaaccacactcttcaaatcatgtgtgaagacaatccggacccgcaac
aaggcgatgggagtggctttgcctcaaaccaagatatttccgcctgctccaacacattct
tcacagttttattccagagcgagggatgtgatgagcaacattgcaagtcatcgtaactta
ctcaaagatcataaaaaaaagtaccttcaggaccaggatcaaactatgtcagattatgaa
cgtagtttcatggaaaaagtggtgaccacaaatctgcgtatcattgatgacaacatccat
agtctgaatattgagctccagggtgaaaagctcgggtccaaagatgctcgtgaatgtcaa
gaaaatatactggccatattgaggttaaaattccaagaaacaaattccactttcaaacat
atgaaagagcaaagaagaaaaaaagaaaaagaaaaagacaacttgttccgtgtgcagcga
ccagttgggtctaaaaaacagcctagcagtggctcggatgactctcacaggaccccacag
ctggctcagcttggaagaaaagaacttagtcaggatacctgcaaaggttcacatcctgag
tcttggagtcattcaactgatagccaaagcacagaccactttaatggtgagagccttgaa
cataatggcaaaaaagaagtgcaaacaactgaaaacaaaacagtgggtaatggaacaaca
gatcttgagaaaactcgatcttcaacttccttgtttgaggaagaaatggagagaatgagc
ggggatctgagtgctgaagaaaggcagatgctggaagaagaaaatgctcacctttacaaa
gaagtgatgtcaaaccacgaagaagtacgtcagatcacccgacaggtggtggagctgagc
caaatgcaagacctcttctcggaaaatgttgatctccaagctcaccaaattgaggagaac
caggaaactataatggcatcgactgaaaatgttcgttctggtaatgagcaagttcgtgaa
gctatgcggaaggatgctggatttcgagtatggataatgttcttcctgattgtaatgtca
tgcacaatccttttcttggattggtacaatgggtga
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