Procambarus clarkii (red swamp crayfish): 123761376
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Entry
123761376 CDS
T07930
Name
(RefSeq) tRNA (uracil-5-)-methyltransferase homolog A isoform X1
KO
K15332
tRNA (uracil-5-)-methyltransferase [EC:2.1.1.-]
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcla03016
]
123761376
Transfer RNA biogenesis [BR:
pcla03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
123761376
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
Methyltransf_31
Methyltransf_11
MTS
Extensin_1
Methyltransf_15
Cons_hypoth95
Methyltransf_4
PCMT
Methyltransf_23
Methyltransf_32
Ubie_methyltran
RRM_1
Methyltransf_12
UPF0020
CDC45
Motif
Other DBs
NCBI-GeneID:
123761376
NCBI-ProteinID:
XP_069169650
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All DBs
Position
7:17880843..17931800
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AA seq
937 aa
AA seq
DB search
MMDMCVGRDCRRGVPGHFELFLFSGKMEKTARGGKGTVKKNKKQPEVVVEKEEMDIQEHE
ENGEEQDEQDEQVEQEEQDEQDEQAEQDEQDEQDEQDEQEQEQDEQEEMEHDGGGEEEPE
IIEIKDDDDEEEDQNDKKDAKDRYGYTKRDEFTSENFKIELRGLPRYYSVAQLKKLLNET
LQLKAHKIKPAGPGKNLAYINFRDEKAKQKAMVVLDEYEWKKCTFKVATAKPVEDPLVKH
KEEEEEVKKKKEFDPDSGLSMAEKVAKSVTPYAHLPYEEQLKIKQKEALHVLRKFGTELA
RVNPELVDWVHWQKLRRQGQVCEVDDIVPSPITNGYRNKCEFTIGINPENNLPTVGFRVA
SYKEGSMDVAPVEHLCHLSSQMKRVVKEFETYVRDSGLAPFSPLTHEGVWRQLNVRTSRN
GDILIVPVIHPQEMSREELDDLKKNIVTYFTEGPGQSLAITSIFFKAYGQKEQGEEEEYE
HLWGLEYITESILDKKFRVSPDAFLQVNTSAAEFLYDKIGELAELDGTSAILDICCGTGT
IGISLADRCLKVYGIELVDKAADDARFNAEENGMDNIVVFTGKAEENMQVLVQNCSKVNV
VGIVDPPRAGLNGNVVFGLRKCDNMKRLVYVSCDPTVASKNFINLGRPQSKQYKGEFFIP
LRAIPVDLFPHTPHYELVILFERWEERKWRRIMEGNPLPRDEEYFKRIPQRPRQGHDFQQ
PTAEPTGGYGEWKTVSTVDMRRQANPRFQPYQQPRPQYNPPKFDVGFSERYDEPLRQGYS
RREDLSPNYGRGFSQNYNRSYEQDYDDPRMDDPRMDDPRMDDPRMDNPRMDNPRLDMPRR
KPLLESPLLDDPCLDNPRLNPRLDNPRLDDRRFGDSRFDERRYDTRRFEDRRFDEPRYDD
PRFEGNSRFDEPRYDRYFNQGFDQSRRLGFRKDDFRY
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgatggacatgtgtgtggggagggattgtcggcgtggggttcccgggcattttgaactg
ttcttatttagtgggaaaatggaaaaaacagcaagaggagggaaaggtactgtgaagaaa
aacaagaaacagccagaggttgtcgtagaaaaggaagagatggacatacaagaacatgaa
gaaaatggtgaagaacaggatgagcaggatgaacaagttgaacaggaggagcaagatgag
caagatgaacaagctgaacaagatgagcaggatgaacaggatgaacaagatgaacaggaa
caggagcaagatgaacaagaagaaatggagcatgatggagggggggaggaggagccagaa
attattgaaataaaggatgatgatgatgaggaggaggatcaaaatgataaaaaagatgcc
aaagatcggtatggctacacgaaacgagatgaatttacatcggaaaattttaagattgaa
cttcgtggtttacctcgttattattctgtggctcaattgaagaagcttctgaatgaaaca
ctgcagctgaaggcccataaaatcaagccagctggaccaggcaaaaatttggcttacata
aacttcagagatgagaaagcaaagcagaaagctatggttgttctggatgaatatgaatgg
aagaaatgtacatttaaagtagcaactgccaaaccagttgaggatccactcgtgaagcat
aaggaggaagaagaggaggtaaaaaagaaaaaagagtttgacccagacagtggacttagt
atggcagagaaagttgcaaagagcgtcacaccatatgcacatttgccctacgaagaacag
ctcaagatcaagcagaaggaagctctacatgtgttgcggaaatttggaaccgaactagct
agagtcaacccagaactggttgattgggttcactggcaaaagttgcgacgacaagggcag
gtgtgtgaagtggatgacattgtcccttcaccaatcacaaatggttatcgtaacaagtgt
gaatttacaattggtatcaaccctgagaataatttgccaactgttggttttcgtgttgca
agttataaggaaggctcgatggatgttgctccagtcgagcatctttgtcatctttctagc
cagatgaagagagttgtgaaggaatttgagacatacgttagagattcaggacttgcacca
ttcagtcctttaacgcacgaaggagtctggcgtcagctgaatgtaagaacatcacggaac
ggtgatattcttattgtccccgtgatccatcctcaagagatgagcagagaggaattagat
gacctgaagaagaatattgtcacatactttactgaagggcctggacagtcattggcaata
acctcaattttcttcaaagcatatggacaaaaagagcaaggtgaagaggaagaatatgaa
catttatggggtctggaatatatcactgaaagtattcttgacaagaaattccgtgtgtcc
ccagatgcttttctacaggtaaatacatctgctgcagagtttctgtatgacaaaattgga
gagctggcagaactggacggcacatcagctattctggacatctgctgtggcactggcaca
attggcatttctcttgcagatcggtgcctaaaagtatatggaatagagttggttgataaa
gcggctgatgatgcccgctttaatgcagaggaaaatggaatggataatatagttgtgttt
actggaaaagctgaggagaacatgcaagtgctggtgcaaaactgttcaaaagtcaacgtt
gtgggtattgttgatcctcctcgtgctggccttaatggtaatgttgtgtttggccttcgt
aagtgcgacaacatgaaacgtctggtgtatgtatcttgtgatcccactgttgcttccaag
aattttatcaacctgggaagaccacagagcaagcagtataaaggtgaattcttcatacct
ctaagagcaatacctgttgacctgtttccccacacccctcactatgagctggtcatactg
tttgagcggtgggaggagcgcaagtggcgtcggataatggaaggaaacccacttccacga
gatgaggagtacttcaaacgcattcctcagagacccagacagggacatgatttccaacaa
cccacagctgaacccactggtggatatggtgaatggaagactgtatcgacagttgacatg
cgccgtcaggccaacccaaggttccagccataccaacagcctcgtcctcagtataatcca
ccaaagtttgatgtcggtttcagtgaacgttatgatgaacctcttcgtcagggttacagt
cgcagggaagatttgagtccaaattatggacgaggatttagccagaattataatcgcagc
tatgagcaagattatgatgatccgcgtatggatgatccacgtatggatgacccacgtatg
gatgatccacgtatggacaatccacgtatggacaacccacggcttgacatgccacgtcgt
aaaccactgcttgagagcccacttcttgacgatccatgtcttgacaacccacgtcttaat
ccacgccttgataatcctcgtcttgatgatagacgttttggcgactcaagatttgacgag
aggcgttatgacacccgacgttttgaagacaggcgttttgatgaaccacgctacgatgac
ccacgatttgaaggtaactcgcgttttgatgaaccacgttatgatcggtacttcaatcaa
ggatttgatcaaagtcgaaggctaggcttcaggaaagatgatttcagatactag
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