Procambarus clarkii (red swamp crayfish): 123761378
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Entry
123761378 CDS
T07930
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcla03016
]
123761378
Enzymes [BR:
pcla01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
123761378
Transfer RNA biogenesis [BR:
pcla03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
123761378
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Gene cluster
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
DUF6825
Motif
Other DBs
NCBI-GeneID:
123761378
NCBI-ProteinID:
XP_045603339
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Position
7:17948302..17980192
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AA seq
445 aa
AA seq
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MEQNKTCRFYVKRKKRYCKMLVKVGQHYCGQHLVEEHLNGEKNQFKRISCPLDPKHSCFE
HRLEHHLAICNAREKTGLSYVSRNINLRDGVLEEPPRIPLSSLTDPELLSLIAKVEAVHK
ENVGNIKESVLSHASLEKEITTPGYGPSVVRHLSQNSSILGHLESVGLLNTSTIPTCFVE
FGAGRGQLTNWLTEAVSDTSKALFVLVDKGAQRYKFDAKLRYNSELSIQRLRVDIQHLNL
EGVASLDTYDRIVGLGKHLCGGATDLALHCLSRYSRPVVAGLVLALCCHHRCTWLTYSGF
TFLSESGFSSNEFYTLTALTSWATCNSKDIPSKENVGDIENLQENDKDYEHSERDKRVSD
VSTLMPQEDSKNTPSEDNQLIENRYTRLNLSAQYREEVGRKAKQLLDYGRVKYLCDQGFQ
CHLVQYVSKEKTLENIALVANFVGS
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaaacaaaacgtgcagattttacgtcaagcgcaaaaagcggtactgcaagatg
ttggttaaagtgggacagcactactgtgggcagcacctggttgaagagcaccttaatggg
gaaaagaaccagttcaagagaatttcttgtccactagatccaaaacactcctgctttgag
caccggttggagcaccacttggcaatttgtaatgctcgggagaagactggcctgtcgtat
gtgagtcgcaacattaacctcagagatggtgtcctagaagaacctccaagaattccattg
tcttcattgacagacccagagctgttatccctcattgccaaagttgaggcagttcacaaa
gaaaatgttggaaatatcaaagaatcagtcttgagtcatgcaagcttggagaaggagata
acaacaccaggttatggccccagcgtagtgcgacatttgagccagaactcctcgattctt
ggccatttagagagtgttgggctacttaatacatccaccataccaacctgctttgttgag
tttggtgctggcagaggccagctgacaaattggttaacggaggcagtatctgacacttca
aaagctctcttcgtgctagtggacaaaggagcccagagatacaagtttgatgcaaagctc
aggtacaattccgagctctcgatacaacgattacgtgtagacattcaacacctcaacctg
gaaggtgtagcaagtcttgacacttatgatcgtattgtgggtcttggaaagcatctgtgt
ggaggtgctactgacttggccctccattgcttgtcaagatattcccgaccagtggtggct
ggtctggtactggctctgtgctgccaccatcgctgtacctggcttacctactcaggtttt
acttttctttcggaatcaggattcagctccaatgagttctacacattaacagccctcaca
agctgggcaacttgcaactcaaaggacattccaagcaaggaaaatgtaggtgacatagag
aatttacaagaaaatgacaaagactatgaacacagtgagagagacaaaagggtttctgat
gtatcaacccttatgccacaagaagatagtaaaaatacaccttcagaagataatcagcta
atagaaaaccgatacacacggttaaatttgtcagcccagtatcgagaagaagttgggaga
aaggcaaagcagttattagattacggtcgagttaagtatttatgtgatcaagggttccag
tgtcatcttgtacagtatgtgtctaaagagaagacattagaaaatattgcacttgtggcc
aactttgttggtagttaa
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