Procambarus clarkii (red swamp crayfish): 123761400
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Entry
123761400 CDS
T07930
Symbol
Vps50
Name
(RefSeq) LOW QUALITY PROTEIN: syndetin
KO
K23288
syndetin
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcla04131
]
123761400 (Vps50)
Membrane trafficking [BR:
pcla04131
]
Protein recycling
Others
EARP complex
123761400 (Vps50)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Utp13
Motif
Other DBs
NCBI-GeneID:
123761400
NCBI-ProteinID:
XP_069170024
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Position
7:complement(20788793..20857886)
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AA seq
959 aa
AA seq
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MDIKEKLMSFIDKQKISLKVPSLPVQAAEFVTSDEFEGRTAVTAQLQRKACLLNDHILTR
EAEQAVIDSIEALYFESDNVDVGEHELQKFPDIADVHIINGMRSRLRKQHAIVSRRVSDL
IMQKQGQCSKEMERVTELQTEVIKGVGLCVEGRKKLALGRSQFTSASLGILANYSKRQKI
ASVIRSLRMIRTLQMTDVQLQSLLKAEDYPGAIQLLLECQKAAATFKHFTCISELSTKLQ
DTLEGAEEQLDVALARVAANFNEANYEKLQIAYGLLGKTQTLMDQLHMHLTSHIHNSAFT
IVLGYVELYNSGGGSNTGSGSSFSKLQYSDLCKYVNEESFLPCLLDLSKCMWNVLKSYRS
IIKWHENNVKVAKDDISSEAEADAEVATSRKYAKQKLEHGLYRIWQDVQAKVRTFILASD
LSHFKFDDFLRILDVINKLIDVGESFCGSKSETLRESIKKQSINYFRNHHRARMEELHMF
LENEGWEACPVKSAFSIYQLMEYRFLKGKDMNFTRISTPSSSPSKKSGSNIERKDVFDLF
SRESSPFDIAAEETIEEDIMANGEASDPLTLSDDDSDDDVPEELKRDFVDEQTGEPPQPH
PKRKLDHGKTPIVTNTTLTILRLIGKYIQMMRLLQPIAFDVMICLSHLFDYYLYSVFTFF
GARGELDQNPSRRLRGSLKKIQDTLILNPDASQDDPSEQDKVQSPSLSPVVDISSSTSIY
GLPVRVAAVESLAFLAAQLEALHCHIEPLIPQQRRTFLQQFYTGTVKITPEIRHHVYTAV
ATQVIDYDGILNRMACVKWDISDLMSQHSEYVDVLLRQLQVLSMRLEEMSRVSPIPSEAY
TALWECIVRITNRTLLEGFAGARRCTNEGRSLMQLDYQQFLMKLECLTAVRPLPDRHLVE
TYIKAYYLPEGAVEEWVQQNRGDYSPRQLTALVATMTHISKRTRQKIATLIEEAGKKPQ
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atggatatcaaagaaaagcttatgtctttcattgataagcaaaagatatcacttaaggtg
ccgtcgttacccgtgcaggcggcagaatttgtaacgtcagacgagtttgagggacggacg
gcggtgacagctcagctccagagaaaagcctgtctcctcaatgatcacattctcacccga
gaggctgagcaggctgtcattgacagtattgaagcgttgtattttgagagtgacaatgta
gatgtgggtgagcacgagctgcaaaaatttccggatattgctgatgttcatattattaat
gggatgaggtcacgcctacgcaagcagcatgcgattgtgtcgcggcgggtgtctgacctc
atcatgcagaagcaggggcagtgtagtaaagaaatggaaagagtgactgagttacagacg
gaagtaattaaaggagtaggcttgtgtgtcgagggccgcaaaaagctagccctaggtaga
agtcagttcacttctgcaagcttaggtattcttgccaattatagcaaacgacagaaaatt
gcaagtgttatcagatctctacgaatgataagaactttacagatgactgatgtgcaactc
cagagcttgctaaaagcagaggactatccaggagcaatacaattgttgctggagtgtcag
aaagctgccgcaacattcaagcactttacctgtatatcagagttgagcacaaaactgcag
gacaccttggaaggtgccgaggaacaactcgatgttgctttagcaagagttgcagctaat
tttaatgaagcaaattacgagaagcttcaaattgcctatggtctcctggggaagacgcag
accctaatggaccagttacatatgcatttgacctcacacattcataactctgcttttacc
attgtccttggatatgtggagctatacaacagcggtggaggcagtaacactgggtcaggg
tcatctttttccaaactgcagtactctgatctatgcaagtacgtaaatgaggagagtttt
cttccgtgtcttttagatttaagtaagtgcatgtggaatgttttaaaaagctatagaagt
atcataaagtggcacgagaacaatgtgaaagtggccaaagatgacatctcaagtgaagct
gaggcagatgctgaggtagctacatctaggaaatatgccaagcagaaattagagcacgga
ctgtacagaatatggcaagacgttcaagctaaagtgcggacttttattttagcatcggat
ctgtctcatttcaaatttgatgactttctgagaatattagatgtcattaacaaactgatt
gatgttggtgaatctttctgtggtagcaaatctgaaacacttcgtgagtccatcaagaaa
caatccattaattactttcgcaatcatcatagagcaagaatggaggagctccatatgttt
ttggaaaatgaagggtgggaagcatgccctgtaaaatctgcattttccatataccagtta
atggagtacagattcctcaaaggaaaggatatgaattttacacgaatttctaccccaagc
tcctcaccaagtaaaaaatcaggaagcaatatagagagaaaggatgtgtttgacttattc
agtagagagagctccccatttgatatagcagctgaagaaactatagaagaagacattatg
gcaaatggagaggcaagtgatcccttgactctgagtgatgacgacagtgatgatgatgtc
ccagaggagctaaagagagattttgttgatgaacaaactggagaacctccccagccacac
ccaaagcggaaattagatcatggcaagacaccaattgtgaccaacacaactttaaccatc
ttgagacttattggcaagtacatccagatgatgagattattacaacccatagcttttgat
gtgatgatttgccttagccatctgtttgactactacctctacagtgtattcacattcttt
ggagccaggggtgaactggaccagaaccccagtcgacggctgcggggatcgctcaagaaa
atacaagacacgctcattcttaacccagatgcctcccaagatgacccatctgagcaggat
aaggtacaaagtccatcgttatcaccagtggtggacatatcatcttcaacaagtatatat
ggtttaccagttcgagtagcagcagtcgagagcctggcttttctagcagcccagctggag
gctttacactgccatattgaacctctcatccctcagcagcgaagaacttttctccagcag
ttctacacaggcactgtgaagattactcccgagattcgccatcatgtatacacagctgtt
gcaacacaagttattgattatgatggaattctaaaccgcatggcctgtgtcaagtgggat
atcagtgatctcatgagccaacatagcgagtatgttgacgtgttgttgagacagctacag
gtgctgagcatgcgtctggaggaaatgagccgtgtgtctcccatacccagcgaggcatac
acagcattgtgggagtgtattgtgcgcatcaccaatcgcactctcttggagggctttgct
ggagcgcggagatgtactaatgaaggacgatcactcatgcaacttgactatcagcaattt
ctcatgaaactagagtgcctgactgcagtccgaccactgcctgaccgacatcttgttgag
acatacatcaaagcctattatcttcccgaaggagctgttgaagagtgggtgcaacagaac
cgtggcgactattctcctcgccaactgactgcccttgtggctacaatgacacacatcagc
aagcgcactagacagaagattgctactttaattgaggaagctggaaagaaacctcaatag
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