Procambarus clarkii (red swamp crayfish): 123761417
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Entry
123761417 CDS
T07930
Name
(RefSeq) high-affinity choline transporter 1 isoform X1
KO
K14387
solute carrier family 5 (high affinity choline transporter), member 7
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
123761417
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcla02000
]
123761417
Transporters [BR:
pcla02000
]
Solute carrier family (SLC)
SLC5: Sodium glucose cotransporter
123761417
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Gene cluster
GFIT
Motif
Pfam:
SSF
DUF6338
Motif
Other DBs
NCBI-GeneID:
123761417
NCBI-ProteinID:
XP_069169304
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Position
7:complement(15267048..15615052)
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AA seq
535 aa
AA seq
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MASTETPFNTTDLLGEGAVVMASTETPFNTTDLLGEGAVAMASTETPFNTTVLLPKGVPE
RDQNVPRQMGLIVLSMVILAIGLWVVKRCKRIKRCKRSSVTDEVIPAAKNFGTFVGILTM
TATWVGGGYINGSAEAVFSSGLIWCQAPFGYAISLTLGGLFFAGKMREARYMTILDPLQD
RYGPRWGAMLYLPALVGETLWSASILAALGSTLAIIEDLNTTVSIFLSGGVVVVYTLFDG
FHPVAYPNAHRDVVQLFSIFLGLWLAVPFAMSNEAVGSLSPSVTDWLGSISADTPWLWGE
WTDFAVLLIFGGIPWQAYFQRVLSARTRRQAEVLSYAGSVGCFLMAVPACFIGAIAKATD
WPRTTYGADVAADDQKRILPLVMQHLTPAWVMVVGLLAVGSAFMMSADSSILFASSMFAN
NIYKNVIRRSASDWEVLMVMRVSVVVVAGAATVVAIKSNSIYVLIYLCGDLVYVMLFPQL
TLAVHAPHHVNTYGSIAAYFLGFTLRILGGEKVLGLPPVIQYPYFRDGVQYFPFR
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccacggagactcccttcaacaccaccgacctgcttggtgaaggagcggtggtg
atggcgtccacggagactcccttcaacaccaccgacctgcttggtgaaggagcggtggcg
atggcgtccacggagactcccttcaacaccaccgtcctactccctaaaggggttccggag
cgtgaccagaacgtgccccgccagatgggcctcattgtcttatccatggtgatcctggcc
atcggtctgtgggtcgttaagcgctgcaagcgcatcaagcgctgcaagcgctcctcggtc
actgacgaggtcataccggccgccaagaattttggcaccttcgtcggcatcctcaccatg
acagcaacgtgggtgggaggtggctacatcaacgggtcggccgaggcggtgttcagtagt
ggcctaatatggtgccaggcgccctttggttacgccatcagcctcaccctaggaggattg
ttcttcgccgggaagatgagggaggcgcgctacatgaccatattggacccgctacaggac
cgctacgggcctcgctggggcgctatgctgtatctgcccgcgctggtcggggagaccctc
tggtcagcctccatcctcgctgccctcgggtcgacgctggccatcatcgaggacttaaac
accacggtctccatctttttgtcgggcggcgtcgttgtagtgtacacgctcttcgacggc
ttccaccccgtcgcctaccccaatgcacacagagacgtcgtccagctcttctccatcttc
ctgggcctgtggctggcggtgcccttcgccatgagtaacgaggccgtgggctcccttagc
cccagcgtgacggactggttgggctccatctccgcggacacgccctggctctggggcgag
tggacggacttcgctgtgctgctcatcttcgggggcatcccctggcaggcgtacttccag
cgtgtgttgtcagcccggaccaggaggcaggcggaggtgctatcctacgcgggctctgtg
ggctgcttcctgatggcggtgccagcctgcttcattggtgccatcgctaaggccaccgat
tggccgaggaccacctatggtgctgatgtggccgctgacgaccagaagcggatcctccca
ctcgtgatgcagcacctcacacctgcgtgggtgatggtagtgggtctgctagctgtcggc
tccgccttcatgatgtcggcggactcctccatcctcttcgcctcctccatgttcgccaac
aacatctacaagaacgtcatcaggcgctcggccagtgactgggaggtgctgatggtgatg
cgagtgtcggtggtggttgttgcaggcgccgctacggtggtggccatcaagagcaactcc
atctacgtactcatctacctgtgcggggacctggtgtacgtgatgttgttcccgcagctg
acgctggccgtgcacgccccccaccacgtcaacacctacggctccatcgccgcctacttc
ctggggttcaccctcaggatcctgggaggcgagaaagtactgggacttcctccagtcatc
cagtacccgtacttcagggacggagtccagtacttccccttcaggtaa
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