Procambarus clarkii (red swamp crayfish): 123761689
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Entry
123761689 CDS
T07930
Name
(RefSeq) protein CASC3
KO
K14323
protein CASC3
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla03013
Nucleocytoplasmic transport
pcla03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123761689
03015 mRNA surveillance pathway
123761689
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcla03019
]
123761689
Messenger RNA biogenesis [BR:
pcla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
123761689
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
123761689
NCBI-ProteinID:
XP_069182457
LinkDB
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Position
18:complement(24058508..24078392)
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AA seq
612 aa
AA seq
DB search
MADRRRRRKLDTGEDSDESEDEQTGPRKPLTGSDGGESECETANEEELGEEEEEEEDELI
IMPDGLVLGEDKKPLDDDEDRKNPQYIPKKGTFYEHDDRTAAEDDVEKPVEEPVVKKEVG
KKKVWKEDDKWNHDKFNEFDQSPKSREEIIAIYGYDIRNEGPPKAHCRRRYGRGPNKYTR
NWKDLDAYSKPVRGSICGGPGRGGPRSLHGSRKTLDNDEEFPVLNSPQYKKHEGDKYNDD
LNKFESPVTRSEVPGAIVDNLHTGDNENYKPEQTAPLASPQQQLPPQYHQQQQQQQQQQQ
QQQQQQQQQQQQLHKISGFSPQPQDVCADGYGGRGRGYRGSGRGYNRGRGYNREREQHRY
NEDSWGQYYKDNCPSGRGNYRGGHQQRLPQPHTPHTPRDIEEITAMLKNISISSQNRKEP
FRNKNRGGGGNVDNRRNTMPPRLQESAAAAANMQGRGNRGGNASPDGDSSSSRPKRYSSQ
RQRSIPGQQVSPFPPQHGYMDPSVDAGYQGGVNDGGIVTSAGHTVTAPHTQHPLAGGAPP
TFVPPAFTTSPPTFPPEPFLGRPPAPRMFPPVTQSPHLFGPPVPLQVNGGGTIGIAAFGL
FCNGGILLGRCC
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggcggacagaaggcgacggagaaaacttgacacaggtgaagattctgacgagtccgag
gatgagcagacaggaccacggaagccccttactggaagtgatggaggtgagagtgagtgt
gaaactgctaatgaggaagagcttggggaagaggaggaggaggaagaggatgagctcatt
ataatgccagatggtcttgtattaggggaggacaaaaagccattagatgacgatgaggat
cggaaaaaccctcagtatatccccaagaaaggaactttttatgagcatgatgaccggacc
gctgccgaagacgatgtagagaaaccggttgaagaaccagtcgttaaaaaggaagttggt
aagaagaaagtttggaaagaggatgataagtggaaccatgacaaatttaatgagtttgac
caatctcccaagtcccgggaagagataatagctatatatggttatgatatacgtaatgaa
ggtcctccaaaagctcattgtagaaggcgttatggtcgtggaccaaacaaatatacacgc
aattggaaggatttggatgcctactccaagcctgttcgtggttccatatgcggaggtcct
ggaagaggtgggcccaggtctttgcatggcagccgaaaaactctagacaacgatgaagaa
ttcccggtattgaattctccacaatacaaaaaacacgaaggcgataaatataatgatgac
ctcaacaagtttgaatctcctgtgacaagatcagaagtgccaggagcaattgttgacaat
ttgcatacaggtgataatgaaaattataaaccagaacaaacggcaccattagcctcacca
cagcagcagttaccaccgcagtatcatcagcagcagcaacagcagcagcagcaacagcag
cagcagcaacaacagcagcagcaacaacagcagcagctacacaagatctcaggttttagt
ccacaaccccaagatgtatgtgctgatggctatggaggacgtggcagaggttacagaggt
tctggtagaggttacaatcgtggcagaggctataatcgagaacgtgaacaacatagatat
aatgaggacagttggggccagtattacaaagacaattgtcccagtggccgtggtaattat
agaggcggacaccagcagcgtttaccccaaccacatactccccatacacccagagatata
gaagaaataacagcaatgttaaagaacatcagtatcagttcacaaaatagaaaagagccg
ttcaggaacaaaaatcgtggtggaggtggaaatgtggataacagacgcaacacaatgcct
ccacgactgcaggaatcggccgctgctgcagccaacatgcaaggtcggggaaacagaggt
ggtaatgcatctcctgacggagatagctcatcttctagaccaaaaagatactcgtctcaa
agacaacgctccattcctgggcagcaagtttcacccttcccaccgcaacatggttatatg
gatccatctgtagatgcaggctaccagggaggagtaaatgatggaggcattgtgacatca
gcaggtcacacagtgacagctcctcatacccagcatccattggctggtggtgctcctcca
acctttgttcctccagcctttacaacttcacctccaactttcccaccagaacctttctta
ggacggcctcctgcacctcggatgttcccgccagtcacacagtcaccacacctctttggt
cctccagtacctttgcaagtcaatgggggtggcactatcggaattgctgccttcgggctt
ttctgcaatggtggtatacttcttggtagatgctgctga
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