Procambarus clarkii (red swamp crayfish): 123761795
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Entry
123761795 CDS
T07930
Name
(RefSeq) probable ATP-dependent RNA helicase DDX20 isoform X1
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcla03041
]
123761795
Enzymes [BR:
pcla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123761795
Spliceosome [BR:
pcla03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
123761795
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
CMS1
AAA_30
UvrD-helicase
EAD5
Terminase_6N
Helicase_RecD
Motif
Other DBs
NCBI-GeneID:
123761795
NCBI-ProteinID:
XP_069186566
LinkDB
All DBs
Position
24:complement(3686641..3741646)
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AA seq
506 aa
AA seq
DB search
MKSVVAGNTDLTLSQKSKMAQRKAHKVEDRERTDDIHIEESVDFNGMYLSDHVQQGLKSS
GFERPSPIQLAAIPLGRCGLDLVVQAKSGTGKTCVFTVIALEMISVSAPTTQVLVIAPTR
EIAVQITQVINAIGSTMPRLRAFTFIGGIHLSEDKAKLNCCHIAVGTPGRLTQLVELGLL
KVDNIRLFVLDEADQLLTGQFTESVVHLASTLPLNKQIIALSATYTEDVAKVAEGLMRSP
NHVRLGRESPALLGVNQFVRLLPYHHQPYRRQQIKFTELMALLATVTFNQCLVFSSSQLR
AESICNALKASGWPVSYLTGGQTQSDRLQALEALCSYKCRVLVSTDLSARGLDSEHVNLV
VNLDMPRDHATYLHRIGRAGRFGSRGGAITLVTEGEEWQAMRAIASLANVRVYLLQDGWK
SSIANNDTKSMEELEFLSDDELQLWLKNNSSQVYGSKSNDKTKEAVEKESKGNGKAAKLR
EKTTIKGTNESLEDSGKENRGDNTNS
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagtgtagtagctggtaacacagatttaactttatcacagaaaagcaaaatggct
caaagaaaagctcataaggttgaggatagagagaggacagatgatattcatatagaagaa
agtgtggactttaatggtatgtacttatcagaccatgtacagcagggattaaaatcttca
ggttttgaacggccaagtcctatccaattggctgccattcctcttggccgatgtgggctg
gacttggtggtacaagcaaagagtggtactggcaaaacatgtgtttttactgtcattgca
ttggaaatgataagtgtatctgctccaacaacccaagttcttgttattgcaccaactcgt
gaaatagctgtgcagataactcaagtgatcaatgcaattggtagtactatgccgagacta
agagccttcacctttattggtgggattcatttgtccgaagacaaagctaaacttaactgc
tgtcacatagcagtaggaaccccagggcgcctaactcaacttgttgaactaggacttctt
aaagtagataatataagactgtttgttttggatgaagctgatcagcttctcactggtcag
tttacagaaagtgtagttcacttggcttctaccttgccactaaataaacaaataatagca
cttagtgcaacatacactgaagatgttgctaaagttgcagaaggacttatgcgatcacca
aaccatgttcgacttgggagagagtcgcctgcccttcttggtgttaatcaatttgtgaga
ttacttccatatcatcatcaaccataccgtaggcaacagatcaaatttacggaacttatg
gctcttcttgccacagtaacatttaatcagtgtcttgtattctcaagctctcagttgcgt
gctgaatccatttgcaatgcattaaaagcatcaggatggccagtttcttatctgactggt
ggtcagacacagagtgatcgtttacaggcactggaagcactgtgttcatataagtgcaga
gtcctagtatcaactgatctctctgcccgtggtttggattctgaacatgttaatctcgtt
gtcaatcttgacatgccacgagatcatgcaacatatcttcaccgtataggacgtgcaggc
cgttttggttcacgaggtggtgccattacacttgtcacagaaggagaggaatggcaggct
atgagggctattgcatctctggcaaatgttcgtgtgtatcttctacaagacggctggaag
tccagcattgccaataatgatactaaaagtatggaggaattggaattcttatctgatgat
gaactgcagctatggctaaagaacaattcttcccaggtgtatggaagcaaaagtaatgat
aaaactaaggaagcagtggagaaggaaagtaaaggtaatggaaaagctgctaaattaaga
gaaaagaccaccatcaaaggtacaaatgaatcattagaggattctggtaaagaaaacaga
ggggataatacaaactcctaa
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