Procambarus clarkii (red swamp crayfish): 123762102
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Entry
123762102 CDS
T07930
Symbol
Snx27
Name
(RefSeq) sorting nexin-27 isoform X1
KO
K17936
sorting nexin-27
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcla04131
]
123762102 (Snx27)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pcla04990
]
123762102 (Snx27)
Membrane trafficking [BR:
pcla04131
]
Protein recycling
Others
Others
123762102 (Snx27)
Domain-containing proteins not elsewhere classified [BR:
pcla04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
123762102 (Snx27)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
PDZ
PDZ_6
RA
RA_2
SNX17-27-31_F1_FERM
TetR_C_26
PDZ_2
SNX17-31_F2_FERM
SNX17_FERM_C
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
123762102
NCBI-ProteinID:
XP_045604372
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All DBs
Position
34:39956841..39975612
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AA seq
491 aa
AA seq
DB search
MSGFNPGPRVVTIYKTDTGFGFNVRGQVSEGGQWRPINGELYPPLQHVSAVLEGGAAEQA
GIRKGDRILEVNGVNVEGAEHRYVVELIKQGGDVLKLTVISVSRKEAERLEPSEETSGFS
YIDYSEKRSLPISIPDYSYIETGGDKYVVFNIYMAGRHLCARRYREFSNLHNNLKREFMD
FNFPKLPGKWPFSLSEQQLDGRRRGLELYLEKVCAVRVIAESDIMQDFLNDSDDHQGNSI
RVDLKVLLPDKSVVTVTQAKNVLAHQVYQAVVEKINIPPETAKCFALFEIVEYNFERKIS
DDEFPHNLYIQNYSTATATCLCLHRWIFNPHRELRLCSSDDTAHTWLFWTAVEDVNRGHV
KPTDQLYQLKALQDVARKEQYLQVVRGCEGYGDIVFPHCPCDSRKKGHVAAYVGYKSFRL
QACKEDGTLQTQVIDFAWSTIEKFEVDDEAMAFCFLYRQTEDLIRWVKIFTPYYHFMEEC
FQRIQEEQQWT
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgagcggttttaaccccggtcctcgggttgtgaccatctacaaaactgacacggggttc
gggttcaatgtccgaggtcaggtgagcgagggtggacagtggagaccgatcaatggggag
ttatacccacctctgcagcatgtctcggccgtgttggaaggaggggctgctgaacaagct
ggtatacgcaagggtgaccgtattctcgaagtgaatggagtgaatgttgagggtgctgaa
catcgttatgttgtggaactcattaaacaaggcggtgatgtgctcaaactaactgtaata
tctgtatcaagaaaggaagcagagaggttagaaccaagtgaagaaacctcgggattttct
tacatcgattacagtgaaaaacgttcacttccaatatcaattcccgactattcttacata
gaaactggtggagataaatatgtagtatttaatatttacatggctgggcgtcatttgtgc
gctcgcagatacagagaattctccaatttacacaataatcttaaaagggagttcatggac
ttcaactttcccaaattaccaggaaaatggcccttttcgttgtctgaacagcaattagat
gggcgacgtagagggttggaactataccttgagaaagtttgtgctgtaagggtaatagca
gaatcggatattatgcaggattttcttaatgattctgatgatcaccaaggcaacagtatt
cgtgtggacctgaaggtgctgttgccggacaagagtgtagtgacggttactcaggctaag
aatgttcttgctcatcaagtttatcaagctgtggtggaaaaaattaacatacctccagaa
acggctaaatgttttgcactttttgagattgtagaatataattttgaacgaaaaattagt
gacgacgagttccctcataacttgtacattcagaactacagcacagcaacggcaacatgt
ttatgtcttcatcgatggatcttcaatcctcaccgagaacttcggttgtgcagctcggat
gatactgcacatacatggctgttctggacagcagtagaggatgttaaccgaggccacgtc
aaaccgacagatcaattgtatcagttaaaggcgcttcaagatgtggctcgcaaagaacag
tatttgcaggtagttcgtggatgtgaaggctatggtgatattgtgttcccccactgtccc
tgcgactcccgcaagaaagggcacgttgctgcatatgtgggctacaagtcattcaggttg
caagcatgtaaagaagatggcacattacaaacacaggtaatcgattttgcttggtccacg
attgagaagtttgaggtggatgatgaagcaatggcattttgttttctctacaggcaaacg
gaagatcttatcagatgggtcaaaatatttacaccctattatcattttatggaggaatgt
ttccaacgtatccaagaagaacagcagtggacgtag
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